RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C RRP12Q12754 1228 aaKnown RBP2.85□□□□□ -1.95
UBX4YMR067C SUC2P00724 532 aa2.84□□□□□ -1.95
UBX4YMR067C SUP35P05453 685 aaKnown RBP2.84□□□□□ -1.95
UBX4YMR067C SPT15P13393 240 aaKnown RBP2.84□□□□□ -1.95
UBX4YMR067C YCR022CP25620 114 aa2.84□□□□□ -1.95
UBX4YMR067C HAT2P39984 401 aa2.84□□□□□ -1.95
UBX4YMR067C DPH1P40487 425 aaKnown RBP2.84□□□□□ -1.95
UBX4YMR067C YML037CQ03703 340 aa2.84□□□□□ -1.95
UBX4YMR067C OPY2Q06810 360 aa2.84□□□□□ -1.95
UBX4YMR067C CTF3Q12748 733 aa2.84□□□□□ -1.95
UBX4YMR067C RAD52P06778 471 aaKnown RBP2.83□□□□□ -1.96
UBX4YMR067C KAR3P17119 729 aa2.83□□□□□ -1.96
UBX4YMR067C YBL029WP38201 376 aa2.83□□□□□ -1.96
UBX4YMR067C DRN1P53255 507 aaKnown RBP2.83□□□□□ -1.96
UBX4YMR067C VIP1Q06685 1146 aaKnown RBP2.83□□□□□ -1.96
UBX4YMR067C YDL057WQ07379 328 aa2.83□□□□□ -1.96
UBX4YMR067C SSP2Q08646 371 aa2.83□□□□□ -1.96
UBX4YMR067C NOP58Q12499 511 aaKnown RBP2.83□□□□□ -1.96
UBX4YMR067C PEP4P07267 405 aaKnown RBP2.82□□□□□ -1.96
UBX4YMR067C CHS3P29465 1165 aa2.82□□□□□ -1.96
UBX4YMR067C SHP1P34223 423 aa2.82□□□□□ -1.96
UBX4YMR067C FUI1P38196 639 aa2.82□□□□□ -1.96
UBX4YMR067C AFG3P39925 761 aa2.82□□□□□ -1.96
UBX4YMR067C PRE5P40302 234 aaKnown RBP2.82□□□□□ -1.96
UBX4YMR067C GPI1P53306 609 aa2.82□□□□□ -1.96
UBX4YMR067C SPE4Q12455 300 aa2.82□□□□□ -1.96
UBX4YMR067C YER078W-AQ3E7A2 54 aa2.82□□□□□ -1.96
UBX4YMR067C HSH49Q99181 213 aaPredicted RBP2.82□□□□□ -1.96
UBX4YMR067C ART10P18634 518 aaKnown RBP2.81□□□□□ -1.96
UBX4YMR067C DPB3P27344 201 aa2.81□□□□□ -1.96
UBX4YMR067C FUN19P28003 413 aaPredicted RBP2.81□□□□□ -1.96
UBX4YMR067C RRT2P38332 387 aa2.81□□□□□ -1.96
UBX4YMR067C GWT1P47026 490 aa2.81□□□□□ -1.96
UBX4YMR067C SDT1P53078 280 aa2.81□□□□□ -1.96
UBX4YMR067C RBG2P53295 368 aaKnown RBP2.81□□□□□ -1.96
UBX4YMR067C WSC2P53832 503 aa2.81□□□□□ -1.96
UBX4YMR067C YMR018WQ04364 514 aa2.81□□□□□ -1.96
UBX4YMR067C YKU80Q04437 629 aa2.81□□□□□ -1.96
UBX4YMR067C RRN11Q04712 507 aa2.81□□□□□ -1.96
UBX4YMR067C PHO92Q06390 306 aa2.81□□□□□ -1.96
UBX4YMR067C THP1Q08231 455 aa2.81□□□□□ -1.96
UBX4YMR067C BSC6Q08280 497 aa2.81□□□□□ -1.96
UBX4YMR067C BRR1Q99177 341 aaPredicted RBP2.81□□□□□ -1.96
UBX4YMR067C SGS1P35187 1447 aa2.8□□□□□ -1.96
UBX4YMR067C CPR1P14832 162 aaKnown RBP2.8□□□□□ -1.96
UBX4YMR067C HSC82P15108 705 aaKnown RBP2.8□□□□□ -1.96
UBX4YMR067C YCK1P23291 538 aa2.8□□□□□ -1.96
UBX4YMR067C MFT1P33441 392 aaKnown RBP2.8□□□□□ -1.96
UBX4YMR067C PAD1P33751 242 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
UBX4YMR067C DUG2P38149 878 aa2.8□□□□□ -1.96
UBX4YMR067C BNA4P38169 460 aa2.8□□□□□ -1.96
UBX4YMR067C CCT6P39079 546 aa2.8□□□□□ -1.96
UBX4YMR067C TIF4631P39935 952 aaKnown RBP2.8□□□□□ -1.96
UBX4YMR067C YGR210CP42942 411 aa2.8□□□□□ -1.96
UBX4YMR067C VID30P53076 958 aa2.8□□□□□ -1.96
UBX4YMR067C CAF40P53829 373 aa2.8□□□□□ -1.96
UBX4YMR067C TOF2Q02208 771 aa2.8□□□□□ -1.96
UBX4YMR067C PAL1Q05518 499 aaKnown RBP2.8□□□□□ -1.96
UBX4YMR067C RBS1Q05672 457 aaKnown RBP2.8□□□□□ -1.96
UBX4YMR067C HHF1P02309 103 aaKnown RBP2.79□□□□□ -1.96
UBX4YMR067C POL4P25615 582 aa2.79□□□□□ -1.96
UBX4YMR067C ARO2P28777 376 aaKnown RBP2.79□□□□□ -1.96
UBX4YMR067C PAP1P29468 568 aaKnown RBP2.79□□□□□ -1.96
UBX4YMR067C CRM1P30822 1084 aaKnown RBP2.79□□□□□ -1.96
UBX4YMR067C DEG1P31115 442 aaKnown RBP2.79□□□□□ -1.96
UBX4YMR067C YEL045CP32616 141 aa2.79□□□□□ -1.96
UBX4YMR067C YME1P32795 747 aa2.79□□□□□ -1.96
UBX4YMR067C YBL059WP34224 193 aa2.79□□□□□ -1.96
UBX4YMR067C SEF1P34228 1148 aa2.79□□□□□ -1.96
UBX4YMR067C UBP11P36026 717 aa2.79□□□□□ -1.96
UBX4YMR067C TCM62P38228 572 aaKnown RBP2.79□□□□□ -1.96
UBX4YMR067C ALG5P40350 334 aa2.79□□□□□ -1.96
UBX4YMR067C YOR387CQ08910 206 aa2.79□□□□□ -1.96
UBX4YMR067C CFT2Q12102 859 aaPredicted RBP2.79□□□□□ -1.96
UBX4YMR067C ERV2Q12284 196 aa2.79□□□□□ -1.96
UBX4YMR067C YBR126W-AQ8TGU7 68 aa2.79□□□□□ -1.96
UBX4YMR067C HIP1P06775 603 aa2.78□□□□□ -1.96
UBX4YMR067C CDC16P09798 840 aa2.78□□□□□ -1.96
UBX4YMR067C HEM15P16622 393 aa2.78□□□□□ -1.96
UBX4YMR067C MRP4P32902 394 aa2.78□□□□□ -1.96
UBX4YMR067C MSN2P33748 704 aa2.78□□□□□ -1.96
UBX4YMR067C FLC2P39719 783 aa2.78□□□□□ -1.96
UBX4YMR067C YGL039WP53183 348 aaKnown RBP2.78□□□□□ -1.96
UBX4YMR067C HEF3P53978 1044 aaKnown RBP2.78□□□□□ -1.96
UBX4YMR067C FIN1Q03898 291 aa2.78□□□□□ -1.96
UBX4YMR067C YEH1Q07804 573 aa2.78□□□□□ -1.96
UBX4YMR067C KEL3Q08979 651 aaPredicted RBP2.78□□□□□ -1.96
UBX4YMR067C NMD4Q12129 218 aa2.78□□□□□ -1.96
UBX4YMR067C MRP13P12686 339 aa2.77□□□□□ -1.97
UBX4YMR067C GLK1P17709 500 aaKnown RBP2.77□□□□□ -1.97
UBX4YMR067C RFS1P38234 210 aaKnown RBP2.77□□□□□ -1.97
UBX4YMR067C NDT80P38830 627 aa2.77□□□□□ -1.97
UBX4YMR067C AIM22P47051 409 aa2.77□□□□□ -1.97
UBX4YMR067C URB2P47108 1174 aa2.77□□□□□ -1.97
UBX4YMR067C ELP3Q02908 557 aaKnown RBP2.77□□□□□ -1.97
UBX4YMR067C COQ9Q05779 260 aa2.77□□□□□ -1.97
UBX4YMR067C ESA1Q08649 445 aa2.77□□□□□ -1.97
UBX4YMR067C HUA2Q12134 243 aa2.77□□□□□ -1.97
UBX4YMR067C YPT6Q99260 215 aa2.77□□□□□ -1.97
UBX4YMR067C PRP2P20095 876 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms