RNA–Protein interactions for RNA: YLR047C

FRE8, Transcript of Protein with sequence similarity to iron/copper reductases, yeast

Gene FRE8, Length 2,061 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE8	YLR047C	GLG1	P36143	616 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	YMC2	P38087	329 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	SEC31	P38968	1273 aa	Known RBP	3.16	□□□□□ -1.9
FRE8	YLR047C	LAS21	P40367	830 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	OPT1	P40897	799 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	CCT7	P42943	550 aa	Known RBP	3.16	□□□□□ -1.9
FRE8	YLR047C	YFR020W	P43600	232 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	ATP22	P50273	684 aa	Predicted RBP	3.16	□□□□□ -1.9
FRE8	YLR047C	VID30	P53076	958 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	NNF2	P53253	936 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	IPI3	P53877	555 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	WAR1	Q03631	944 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	ROY1	Q04847	553 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	HRD3	Q05787	833 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	PGC1	Q08959	321 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	ATG9	Q12142	997 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	PDH1	Q12428	516 aa	Known RBP	3.16	□□□□□ -1.9
FRE8	YLR047C	AVL9	Q12500	764 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	FKS1	P38631	1876 aa	Known RBP	3.16	□□□□□ -1.9
FRE8	YLR047C	PET111	P08468	800 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	MRPL9	P31334	269 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	CMC1	P36064	111 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	SLX1	P38324	304 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	ECM10	P39987	644 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	YFL015C	P43578	164 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	TCB2	P48231	1178 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	BTN2	P53286	410 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
FRE8	YLR047C	RBS1	Q05672	457 aa	Known RBP	3.16	□□□□□ -1.9
FRE8	YLR047C	MMR1	Q06324	491 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	YPL191C	Q08930	360 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	FMP40	Q08968	688 aa	Predicted RBP	3.16	□□□□□ -1.9
FRE8	YLR047C	AFI1	Q99222	893 aa		3.16	□□□□□ -1.9
FRE8	YLR047C	PDA1	P16387	420 aa	Known RBP	3.15	□□□□□ -1.9
FRE8	YLR047C	MRE11	P32829	692 aa		3.15	□□□□□ -1.9
FRE8	YLR047C	SOF1	P33750	489 aa	Known RBP	3.15	□□□□□ -1.9
FRE8	YLR047C	DRE2	P36152	348 aa		3.15	□□□□□ -1.9
FRE8	YLR047C	ADE17	P38009	592 aa	Known RBP	3.15	□□□□□ -1.9
FRE8	YLR047C	YHL017W	P38745	532 aa		3.15	□□□□□ -1.9
FRE8	YLR047C	SEC28	P40509	296 aa	Known RBP	3.15	□□□□□ -1.9
FRE8	YLR047C	VMA13	P41807	478 aa	Known RBP	3.15	□□□□□ -1.9
FRE8	YLR047C	SAD1	P43589	448 aa		3.15	□□□□□ -1.9
FRE8	YLR047C	DPB11	P47027	764 aa	Predicted RBP	3.15	□□□□□ -1.9
FRE8	YLR047C	HOS2	P53096	452 aa	Predicted RBP	3.15	□□□□□ -1.9
FRE8	YLR047C	YGL117W	P53133	265 aa		3.15	□□□□□ -1.9
FRE8	YLR047C	TWF1	P53250	332 aa		3.15	□□□□□ -1.9
FRE8	YLR047C	ZPR1	P53303	486 aa	Known RBP	3.15	□□□□□ -1.9
FRE8	YLR047C	VPS9	P54787	451 aa		3.15	□□□□□ -1.9
FRE8	YLR047C	PNG1	Q02890	363 aa		3.15	□□□□□ -1.9
FRE8	YLR047C	RQC1	Q05468	723 aa	Known RBP	3.15	□□□□□ -1.9
FRE8	YLR047C	YDR341C	Q05506	607 aa	Known RBP	3.15	□□□□□ -1.9
FRE8	YLR047C	AHA1	Q12449	350 aa	Known RBP	3.15	□□□□□ -1.9
FRE8	YLR047C	PGK1	P00560	416 aa	Known RBP	3.15	□□□□□ -1.91
FRE8	YLR047C	MF(ALPHA)1	P01149	165 aa		3.15	□□□□□ -1.91
FRE8	YLR047C	HXK2	P04807	486 aa	Known RBP	3.15	□□□□□ -1.91
FRE8	YLR047C	KRR1	P25586	316 aa	Predicted RBP	3.15	□□□□□ -1.91
FRE8	YLR047C	PAP1	P29468	568 aa	Known RBP	3.15	□□□□□ -1.91
FRE8	YLR047C	SSE2	P32590	693 aa	Known RBP	3.15	□□□□□ -1.91
FRE8	YLR047C	SEF1	P34228	1148 aa		3.15	□□□□□ -1.91
FRE8	YLR047C	DIA4	P38705	446 aa	Predicted RBP	3.15	□□□□□ -1.91
FRE8	YLR047C	BDH2	P39713	417 aa		3.15	□□□□□ -1.91
FRE8	YLR047C	GDI1	P39958	451 aa	Known RBP	3.15	□□□□□ -1.91
FRE8	YLR047C	DIA3	P52290	468 aa		3.15	□□□□□ -1.91
FRE8	YLR047C	VPS73	P53142	486 aa	Known RBP	3.15	□□□□□ -1.91
FRE8	YLR047C	OGG1	P53397	376 aa	Predicted RBP	3.15	□□□□□ -1.91
FRE8	YLR047C	BOP3	P53958	396 aa		3.15	□□□□□ -1.91
FRE8	YLR047C	EFM6	P53970	246 aa		3.15	□□□□□ -1.91
FRE8	YLR047C	ARG7	Q04728	441 aa		3.15	□□□□□ -1.91
FRE8	YLR047C	YLR455W	Q06188	304 aa		3.15	□□□□□ -1.91
FRE8	YLR047C	SMF3	Q12078	473 aa	Predicted RBP	3.15	□□□□□ -1.91
FRE8	YLR047C	INP53	Q12271	1107 aa		3.15	□□□□□ -1.91
FRE8	YLR047C	GPM3	Q12326	303 aa		3.15	□□□□□ -1.91
FRE8	YLR047C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
FRE8	YLR047C	ADH7	P25377	361 aa		3.14	□□□□□ -1.91
FRE8	YLR047C	YJU2	P28320	278 aa	Predicted RBP	3.14	□□□□□ -1.91
FRE8	YLR047C	BUD2	P33314	1104 aa		3.14	□□□□□ -1.91
FRE8	YLR047C	LHS1	P36016	881 aa		3.14	□□□□□ -1.91
FRE8	YLR047C	SNU114	P36048	1008 aa	Known RBP	3.14	□□□□□ -1.91
FRE8	YLR047C	ELO1	P39540	310 aa		3.14	□□□□□ -1.91
FRE8	YLR047C	MRX1	P40050	688 aa		3.14	□□□□□ -1.91
FRE8	YLR047C	ALG5	P40350	334 aa		3.14	□□□□□ -1.91
FRE8	YLR047C	EFM4	P40516	257 aa		3.14	□□□□□ -1.91
FRE8	YLR047C	PEX25	Q02969	394 aa		3.14	□□□□□ -1.91
FRE8	YLR047C	DPB4	Q04603	196 aa	Known RBP	3.14	□□□□□ -1.91
FRE8	YLR047C	RPL3	P14126	387 aa	Known RBP	3.13	□□□□□ -1.91
FRE8	YLR047C	MBR1	P23493	339 aa		3.13	□□□□□ -1.91
FRE8	YLR047C	PUP3	P25451	205 aa	Known RBP	3.13	□□□□□ -1.91
FRE8	YLR047C	PTC6	P25646	442 aa		3.13	□□□□□ -1.91
FRE8	YLR047C	BUD14	P27637	709 aa		3.13	□□□□□ -1.91
FRE8	YLR047C	HXT3	P32466	567 aa	Known RBP	3.13	□□□□□ -1.91
FRE8	YLR047C	GSH1	P32477	678 aa		3.13	□□□□□ -1.91
FRE8	YLR047C	SEC66	P33754	206 aa		3.13	□□□□□ -1.91
FRE8	YLR047C	YBR144C	P34215	104 aa		3.13	□□□□□ -1.91
FRE8	YLR047C	THI2	P38141	450 aa		3.13	□□□□□ -1.91
FRE8	YLR047C	OTU2	P38747	307 aa	Known RBP	3.13	□□□□□ -1.91
FRE8	YLR047C	PHM8	P40025	321 aa		3.13	□□□□□ -1.91
FRE8	YLR047C	YIL166C	P40445	542 aa		3.13	□□□□□ -1.91
FRE8	YLR047C	HXT14	P42833	540 aa		3.13	□□□□□ -1.91
FRE8	YLR047C	ASN1	P49089	572 aa	Known RBP	3.13	□□□□□ -1.91
FRE8	YLR047C	YPR003C	P53394	754 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 28 ms