RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	RCY1	P39531	840 aa		3.79	□□□□□ -1.8
LOS1	YKL205W	VHR1	P40522	640 aa		3.79	□□□□□ -1.8
LOS1	YKL205W	TES1	P41903	349 aa	Known RBP	3.79	□□□□□ -1.8
LOS1	YKL205W	AIM22	P47051	409 aa		3.79	□□□□□ -1.8
LOS1	YKL205W	CUS2	P53830	285 aa	Predicted RBP	3.79	□□□□□ -1.8
LOS1	YKL205W	HSP31	Q04432	237 aa		3.79	□□□□□ -1.8
LOS1	YKL205W	BNA5	Q05979	453 aa		3.79	□□□□□ -1.8
LOS1	YKL205W	VPS74	Q06385	345 aa		3.79	□□□□□ -1.8
LOS1	YKL205W	YLR030W	Q07967	263 aa		3.79	□□□□□ -1.8
LOS1	YKL205W	PST1	Q12355	444 aa		3.79	□□□□□ -1.8
LOS1	YKL205W	FUS1	P11710	512 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	RAM1	P22007	431 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	VAN1	P23642	535 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	RPL5	P26321	297 aa	Known RBP	3.78	□□□□□ -1.8
LOS1	YKL205W	BUB2	P26448	306 aa	Predicted RBP	3.78	□□□□□ -1.8
LOS1	YKL205W	BUB3	P26449	341 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	MKK2	P32491	506 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	UTH1	P36135	365 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	SCO2	P38072	301 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	BEM4	P39011	633 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	GIM4	P40005	111 aa	Known RBP	3.78	□□□□□ -1.8
LOS1	YKL205W	YJL070C	P40361	888 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	YJL043W	P47053	257 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	SGF73	P53165	657 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	SWS2	P53937	143 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	RNY1	Q02933	434 aa	Known RBP	3.78	□□□□□ -1.8
LOS1	YKL205W	YMR210W	Q03649	449 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	VID22	Q05934	901 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	OSW1	Q08692	278 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	YPL066W	Q12194	479 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	HSP42	Q12329	375 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	NAG1	Q8TGN9	163 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	COX3	P00420	269 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	TUB1	P09733	447 aa	Known RBP	3.78	□□□□□ -1.8
LOS1	YKL205W	CLB3	P24870	427 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	GUT1	P32190	709 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	FZO1	P38297	855 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	PRM10	P42946	383 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	FAR3	P46671	204 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	YGR053C	P53234	283 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	ARC35	P53731	342 aa	Known RBP	3.78	□□□□□ -1.8
LOS1	YKL205W	ERG13	P54839	491 aa	Known RBP	3.78	□□□□□ -1.8
LOS1	YKL205W	LSM3	P57743	89 aa	Known RBP	3.78	□□□□□ -1.8
LOS1	YKL205W	RSF1	Q05043	376 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	SEC53	P07283	254 aa	Known RBP	3.78	□□□□□ -1.8
LOS1	YKL205W	DAP2	P18962	818 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	ARF2	P19146	181 aa	Known RBP	3.78	□□□□□ -1.8
LOS1	YKL205W	DMC1	P25453	334 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	ADE1	P27616	306 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	FUN30	P31380	1131 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	SLX5	P32828	619 aa	Known RBP	3.78	□□□□□ -1.8
LOS1	YKL205W	GIP1	P38229	639 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	BMT2	P38278	337 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	UBS1	P38290	277 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	TSL1	P38427	1098 aa	Known RBP	3.78	□□□□□ -1.8
LOS1	YKL205W	UTP9	P38882	575 aa	Known RBP	3.78	□□□□□ -1.8
LOS1	YKL205W	ERV46	P39727	415 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	YJR098C	P47139	656 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	EXG2	P52911	562 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	YMR102C	Q03177	834 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	RSM10	Q03201	203 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	HPT1	Q04178	221 aa	Known RBP	3.78	□□□□□ -1.8
LOS1	YKL205W	VTA1	Q06263	330 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	REX3	Q12090	404 aa		3.78	□□□□□ -1.8
LOS1	YKL205W	URA4	P20051	364 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	MRPL6	P32904	214 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	YDR089W	P38966	869 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	PRE6	P40303	254 aa	Known RBP	3.77	□□□□□ -1.81
LOS1	YKL205W	LRO1	P40345	661 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	SNM1	P40993	198 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	AIF1	P52923	378 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	DIN7	Q12086	430 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	MST1	P07236	462 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	LEU1	P07264	779 aa	Known RBP	3.77	□□□□□ -1.81
LOS1	YKL205W	CDC13	P32797	924 aa	Known RBP	3.77	□□□□□ -1.81
LOS1	YKL205W	ASC1	P38011	319 aa	Known RBP	3.77	□□□□□ -1.81
LOS1	YKL205W	GOS1	P38736	223 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	LRP1	P38801	184 aa	Known RBP	3.77	□□□□□ -1.81
LOS1	YKL205W	IES5	P40060	125 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	FET5	P43561	622 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	AAD10	P47182	288 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	YGL235W	P53071	178 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	YNL035C	P53962	389 aa	Known RBP	3.77	□□□□□ -1.81
LOS1	YKL205W	IDP3	P53982	420 aa	Known RBP	3.77	□□□□□ -1.81
LOS1	YKL205W	LGE1	Q02796	332 aa	Known RBP	3.77	□□□□□ -1.81
LOS1	YKL205W	YDR239C	Q03780	787 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	YML053C	Q04978	212 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	RAD34	Q06665	692 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	MLH3	Q12083	715 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	MSS18	P08593	268 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	YMR085W	P0CF18	432 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	RAD14	P28519	371 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	COX13	P32799	129 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	LOT5	P34234	306 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	URA8	P38627	578 aa	Predicted RBP	3.77	□□□□□ -1.81
LOS1	YKL205W	PCL5	P38794	229 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	DHH1	P39517	506 aa	Known RBP	3.77	□□□□□ -1.81
LOS1	YKL205W	YER158C	P40095	573 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	UBC9	P50623	157 aa	Predicted RBP	3.77	□□□□□ -1.81
LOS1	YKL205W	FRE4	P53746	719 aa		3.77	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms