RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C IPI3P53877 555 aa2.54□□□□□ -2
TPM2YIL138C TIM10P87108 93 aa2.54□□□□□ -2
TPM2YIL138C YVH1Q02256 364 aaKnown RBP2.54□□□□□ -2
TPM2YIL138C RBA50Q04418 439 aa2.54□□□□□ -2
TPM2YIL138C MFB1Q04922 465 aa2.54□□□□□ -2
TPM2YIL138C TSR2Q06672 205 aaKnown RBP2.54□□□□□ -2
TPM2YIL138C RTT109Q07794 436 aa2.54□□□□□ -2
TPM2YIL138C YEH1Q07804 573 aa2.54□□□□□ -2
TPM2YIL138C YJR112W-AQ3E743 109 aa2.54□□□□□ -2
TPM2YIL138C SSN2P38931 1420 aa2.53□□□□□ -2
TPM2YIL138C MRP7P12687 371 aa2.53□□□□□ -2
TPM2YIL138C SYN8P31377 255 aa2.53□□□□□ -2
TPM2YIL138C SPC110P32380 944 aa2.53□□□□□ -2
TPM2YIL138C HXT1P32465 570 aa2.53□□□□□ -2
TPM2YIL138C RPL32P38061 130 aaKnown RBP2.53□□□□□ -2
TPM2YIL138C CCT6P39079 546 aa2.53□□□□□ -2
TPM2YIL138C DOT5P40553 215 aa2.53□□□□□ -2
TPM2YIL138C YGR066CP53242 292 aa2.53□□□□□ -2
TPM2YIL138C ARE2P53629 642 aaKnown RBP2.53□□□□□ -2
TPM2YIL138C SMM1P53720 384 aaKnown RBP2.53□□□□□ -2
TPM2YIL138C VPS75P53853 264 aa2.53□□□□□ -2
TPM2YIL138C MDM1Q01846 1127 aa2.53□□□□□ -2
TPM2YIL138C YMR160WQ03823 816 aa2.53□□□□□ -2
TPM2YIL138C VPS38Q05919 439 aa2.53□□□□□ -2
TPM2YIL138C IMH1Q06704 911 aaKnown RBP2.53□□□□□ -2
TPM2YIL138C ETT1Q08421 412 aaKnown RBP2.53□□□□□ -2
TPM2YIL138C YPL272CQ08984 517 aa2.53□□□□□ -2
TPM2YIL138C GAL80P04387 435 aa2.52□□□□□ -2.01
TPM2YIL138C MRP13P12686 339 aa2.52□□□□□ -2.01
TPM2YIL138C SUI2P20459 304 aaKnown RBP2.52□□□□□ -2.01
TPM2YIL138C BUD5P25300 642 aaPredicted RBP2.52□□□□□ -2.01
TPM2YIL138C OCA4P25366 362 aa2.52□□□□□ -2.01
TPM2YIL138C SNC1P31109 117 aa2.52□□□□□ -2.01
TPM2YIL138C ATS1P31386 333 aa2.52□□□□□ -2.01
TPM2YIL138C YEL045CP32616 141 aa2.52□□□□□ -2.01
TPM2YIL138C PTR2P32901 601 aa2.52□□□□□ -2.01
TPM2YIL138C VPS17P32913 551 aa2.52□□□□□ -2.01
TPM2YIL138C NUP133P36161 1157 aa2.52□□□□□ -2.01
TPM2YIL138C ARP1P38696 384 aa2.52□□□□□ -2.01
TPM2YIL138C MTC6P38849 526 aa2.52□□□□□ -2.01
TPM2YIL138C NPR2P39923 615 aa2.52□□□□□ -2.01
TPM2YIL138C ESL1P40456 1118 aa2.52□□□□□ -2.01
TPM2YIL138C SGN1P40561 250 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
TPM2YIL138C ARF3P40994 183 aaRIP-Chip data2.52□□□□□ -2.01not detected
TPM2YIL138C SNG1P46950 547 aa2.52□□□□□ -2.01
TPM2YIL138C YGR126WP53274 230 aa2.52□□□□□ -2.01
TPM2YIL138C PAL1Q05518 499 aaKnown RBP2.52□□□□□ -2.01
TPM2YIL138C YDL057WQ07379 328 aa2.52□□□□□ -2.01
TPM2YIL138C SDH5Q08230 162 aa2.52□□□□□ -2.01
TPM2YIL138C ARG3P05150 338 aa2.51□□□□□ -2.01
TPM2YIL138C ART10P18634 518 aaKnown RBP2.51□□□□□ -2.01
TPM2YIL138C YME1P32795 747 aa2.51□□□□□ -2.01
TPM2YIL138C YKL023WP36103 277 aaKnown RBP2.51□□□□□ -2.01
TPM2YIL138C JNM1P36224 373 aa2.51□□□□□ -2.01
TPM2YIL138C PTH1P38876 190 aaKnown RBP2.51□□□□□ -2.01
TPM2YIL138C CIN4P39110 191 aa2.51□□□□□ -2.01
TPM2YIL138C SPO22P40511 975 aa2.51□□□□□ -2.01
TPM2YIL138C APT1P49435 187 aaKnown RBP2.51□□□□□ -2.01
TPM2YIL138C IMD4P50094 524 aaKnown RBP2.51□□□□□ -2.01
TPM2YIL138C PYK2P52489 506 aaKnown RBP2.51□□□□□ -2.01
TPM2YIL138C MRPL19P53875 158 aa2.51□□□□□ -2.01
TPM2YIL138C SAM50P53969 484 aa2.51□□□□□ -2.01
TPM2YIL138C YDR239CQ03780 787 aa2.51□□□□□ -2.01
TPM2YIL138C SSK1Q07084 712 aa2.51□□□□□ -2.01
TPM2YIL138C RLM1Q12224 676 aa2.51□□□□□ -2.01
TPM2YIL138C AVL9Q12500 764 aa2.51□□□□□ -2.01
TPM2YIL138C FOB1O13329 566 aa2.5□□□□□ -2.01
TPM2YIL138C DFR1P07807 211 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
TPM2YIL138C PMR1P13586 950 aa2.5□□□□□ -2.01
TPM2YIL138C SEC62P21825 274 aa2.5□□□□□ -2.01
TPM2YIL138C SIP2P34164 415 aaKnown RBP2.5□□□□□ -2.01
TPM2YIL138C MTR2P34232 184 aaKnown RBP2.5□□□□□ -2.01
TPM2YIL138C ECM15P35195 104 aa2.5□□□□□ -2.01
TPM2YIL138C TCD2P36101 447 aaKnown RBP2.5□□□□□ -2.01
TPM2YIL138C CST26P38226 397 aa2.5□□□□□ -2.01
TPM2YIL138C LAG1P38703 411 aa2.5□□□□□ -2.01
TPM2YIL138C PET130P47065 347 aa2.5□□□□□ -2.01
TPM2YIL138C BTN2P53286 410 aa2.5□□□□□ -2.01
TPM2YIL138C YPL014WQ02606 381 aa2.5□□□□□ -2.01
TPM2YIL138C MSC1Q03104 513 aa2.5□□□□□ -2.01
TPM2YIL138C DIC1Q06143 298 aa2.5□□□□□ -2.01
TPM2YIL138C THI20Q08224 551 aa2.5□□□□□ -2.01
TPM2YIL138C AYT1Q12226 474 aa2.5□□□□□ -2.01
TPM2YIL138C PDH1Q12428 516 aaKnown RBP2.5□□□□□ -2.01
TPM2YIL138C MON2P48563 1636 aaPredicted RBP2.5□□□□□ -2.01
TPM2YIL138C TY1B-DR4Q07793 1604 aa2.5□□□□□ -2.01
TPM2YIL138C RPL20AP0CX23 172 aaKnown RBP2.49□□□□□ -2.01
TPM2YIL138C RPL20BP0CX24 172 aaPredicted RBP2.49□□□□□ -2.01
TPM2YIL138C MTC4P38335 694 aaKnown RBP2.49□□□□□ -2.01
TPM2YIL138C MSR1P38714 643 aa2.49□□□□□ -2.01
TPM2YIL138C SDT1P53078 280 aa2.49□□□□□ -2.01
TPM2YIL138C YGL039WP53183 348 aaKnown RBP2.49□□□□□ -2.01
TPM2YIL138C CAF130P53280 1122 aaPredicted RBP2.49□□□□□ -2.01
TPM2YIL138C SHR3Q02774 210 aa2.49□□□□□ -2.01
TPM2YIL138C RPC11Q04307 110 aaPredicted RBP2.49□□□□□ -2.01
TPM2YIL138C COQ9Q05779 260 aa2.49□□□□□ -2.01
TPM2YIL138C RTP1Q12751 981 aa2.49□□□□□ -2.01
TPM2YIL138C YML133CQ03099 1374 aa2.49□□□□□ -2.01
TPM2YIL138C YLL067CQ07888 1374 aa2.49□□□□□ -2.01
TPM2YIL138C YLL066CQ99208 1374 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms