RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W PET123P17558 318 aa4.7□□□□□ -1.66
VPS29YHR012W PRP6P19735 899 aaPredicted RBP4.7□□□□□ -1.66
VPS29YHR012W CLN2P20438 545 aa4.7□□□□□ -1.66
VPS29YHR012W TRX2P22803 104 aaKnown RBP4.7□□□□□ -1.66
VPS29YHR012W YCK2P23292 546 aaKnown RBP4.7□□□□□ -1.66
VPS29YHR012W CDC20P26309 610 aa4.7□□□□□ -1.66
VPS29YHR012W NIP1P32497 812 aaKnown RBP4.7□□□□□ -1.66
VPS29YHR012W MFT1P33441 392 aaKnown RBP4.7□□□□□ -1.66
VPS29YHR012W AHP1P38013 176 aaKnown RBP4.7□□□□□ -1.66
VPS29YHR012W CTP1P38152 299 aa4.7□□□□□ -1.66
VPS29YHR012W AMN1P38285 549 aaPredicted RBP4.7□□□□□ -1.66
VPS29YHR012W AXL2P38928 823 aa4.7□□□□□ -1.66
VPS29YHR012W SEC24P40482 926 aaKnown RBP4.7□□□□□ -1.66
VPS29YHR012W INA22P40576 216 aa4.7□□□□□ -1.66
VPS29YHR012W YFL012WP43580 148 aa4.7□□□□□ -1.66
VPS29YHR012W IKS1P47042 667 aa4.7□□□□□ -1.66
VPS29YHR012W HOC1P47124 396 aa4.7□□□□□ -1.66
VPS29YHR012W SGF73P53165 657 aa4.7□□□□□ -1.66
VPS29YHR012W YGR015CP53208 328 aa4.7□□□□□ -1.66
VPS29YHR012W YNL260CP53846 198 aa4.7□□□□□ -1.66
VPS29YHR012W URH1Q04179 340 aa4.7□□□□□ -1.66
VPS29YHR012W YET2Q04210 160 aa4.7□□□□□ -1.66
VPS29YHR012W HDA3Q06623 655 aa4.7□□□□□ -1.66
VPS29YHR012W TEN1Q07921 160 aa4.7□□□□□ -1.66
VPS29YHR012W TMS1Q12116 473 aa4.7□□□□□ -1.66
VPS29YHR012W HAL9Q12180 1030 aa4.7□□□□□ -1.66
VPS29YHR012W YDR215CQ12240 137 aa4.7□□□□□ -1.66
VPS29YHR012W ICT1Q12385 394 aa4.7□□□□□ -1.66
VPS29YHR012W YLR111WQ12528 110 aa4.7□□□□□ -1.66
VPS29YHR012W CYR1P08678 2026 aaKnown RBP4.7□□□□□ -1.66
VPS29YHR012W GPM1P00950 247 aaKnown RBP4.69□□□□□ -1.66
VPS29YHR012W KAR1P11927 433 aa4.69□□□□□ -1.66
VPS29YHR012W PHO3P24031 467 aa4.69□□□□□ -1.66
VPS29YHR012W CMK1P27466 446 aaKnown RBP4.69□□□□□ -1.66
VPS29YHR012W LYP1P32487 611 aa4.69□□□□□ -1.66
VPS29YHR012W YEL043WP32618 956 aa4.69□□□□□ -1.66
VPS29YHR012W GCG1P32656 232 aaKnown RBP4.69□□□□□ -1.66
VPS29YHR012W KAP122P32767 1081 aa4.69□□□□□ -1.66
VPS29YHR012W NRP1P32770 719 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
VPS29YHR012W ORC2P32833 620 aa4.69□□□□□ -1.66
VPS29YHR012W INM1P38710 295 aa4.69□□□□□ -1.66
VPS29YHR012W YHI9P38765 294 aa4.69□□□□□ -1.66
VPS29YHR012W PLB1P39105 664 aa4.69□□□□□ -1.66
VPS29YHR012W GID8P40208 455 aa4.69□□□□□ -1.66
VPS29YHR012W GAT1P43574 510 aa4.69□□□□□ -1.66
VPS29YHR012W GCD14P46959 383 aaPredicted RBP4.69□□□□□ -1.66
VPS29YHR012W TEL2P53038 688 aa4.69□□□□□ -1.66
VPS29YHR012W ADE13Q05911 482 aaKnown RBP4.69□□□□□ -1.66
VPS29YHR012W UTP13Q05946 817 aaKnown RBP4.69□□□□□ -1.66
VPS29YHR012W YLR177WQ06251 628 aa4.69□□□□□ -1.66
VPS29YHR012W FRA1Q07825 749 aa4.69□□□□□ -1.66
VPS29YHR012W MRH1Q12117 320 aaPredicted RBP4.69□□□□□ -1.66
VPS29YHR012W RRP42Q12277 265 aaPredicted RBP4.69□□□□□ -1.66
VPS29YHR012W SRN2Q99176 213 aa4.69□□□□□ -1.66
VPS29YHR012W PHO5P00635 467 aa4.68□□□□□ -1.66
VPS29YHR012W AI3P03877 415 aa4.68□□□□□ -1.66
VPS29YHR012W RPL7AP05737 244 aaKnown RBP4.68□□□□□ -1.66
VPS29YHR012W STE3P06783 470 aa4.68□□□□□ -1.66
VPS29YHR012W CYT1P07143 309 aa4.68□□□□□ -1.66
VPS29YHR012W RPL43AP0CX25 92 aaKnown RBP4.68□□□□□ -1.66
VPS29YHR012W RPL43BP0CX26 92 aa4.68□□□□□ -1.66
VPS29YHR012W RPS4AP0CX35 261 aaKnown RBP4.68□□□□□ -1.66
VPS29YHR012W RPS4BP0CX36 261 aaKnown RBP4.68□□□□□ -1.66
VPS29YHR012W KIN2P13186 1147 aaKnown RBP4.68□□□□□ -1.66
VPS29YHR012W PRP16P15938 1071 aaPredicted RBP4.68□□□□□ -1.66
VPS29YHR012W CBF1P17106 351 aa4.68□□□□□ -1.66
VPS29YHR012W MRPL25P23369 157 aa4.68□□□□□ -1.66
VPS29YHR012W SPS22P25380 463 aa4.68□□□□□ -1.66
VPS29YHR012W KAR4P25583 335 aa4.68□□□□□ -1.66
VPS29YHR012W ADE1P27616 306 aa4.68□□□□□ -1.66
VPS29YHR012W YJU2P28320 278 aaPredicted RBP4.68□□□□□ -1.66
VPS29YHR012W PAP1P29468 568 aaKnown RBP4.68□□□□□ -1.66
VPS29YHR012W UGP1P32861 499 aaKnown RBP4.68□□□□□ -1.66
VPS29YHR012W BEM3P32873 1128 aa4.68□□□□□ -1.66
VPS29YHR012W LRG1P35688 1017 aa4.68□□□□□ -1.66
VPS29YHR012W MNL1P38888 796 aa4.68□□□□□ -1.66
VPS29YHR012W YHR210CP38893 341 aa4.68□□□□□ -1.66
VPS29YHR012W NPT1P39683 429 aaKnown RBP4.68□□□□□ -1.66
VPS29YHR012W YFR020WP43600 232 aa4.68□□□□□ -1.66
VPS29YHR012W NMD5P46970 1048 aa4.68□□□□□ -1.66
VPS29YHR012W ATG36P46983 293 aa4.68□□□□□ -1.66
VPS29YHR012W UBX6P47049 396 aa4.68□□□□□ -1.66
VPS29YHR012W ERG26P53199 349 aaKnown RBP4.68□□□□□ -1.66
VPS29YHR012W PRP38Q00723 242 aaPredicted RBP4.68□□□□□ -1.66
VPS29YHR012W HPT1Q04178 221 aaKnown RBP4.68□□□□□ -1.66
VPS29YHR012W SPO20Q04359 397 aa4.68□□□□□ -1.66
VPS29YHR012W ROY1Q04847 553 aa4.68□□□□□ -1.66
VPS29YHR012W ENT2Q05785 613 aa4.68□□□□□ -1.66
VPS29YHR012W MDM30Q05930 598 aa4.68□□□□□ -1.66
VPS29YHR012W XYL2Q07993 356 aa4.68□□□□□ -1.66
VPS29YHR012W ACM1Q08981 209 aa4.68□□□□□ -1.66
VPS29YHR012W RPL7BQ12213 244 aaKnown RBP4.68□□□□□ -1.66
VPS29YHR012W MCM16Q12262 181 aa4.68□□□□□ -1.66
VPS29YHR012W RGT2Q12300 763 aa4.68□□□□□ -1.66
VPS29YHR012W HEM2P05373 342 aa4.67□□□□□ -1.66
VPS29YHR012W CDC21P06785 304 aa4.67□□□□□ -1.66
VPS29YHR012W SEC53P07283 254 aaKnown RBP4.67□□□□□ -1.66
VPS29YHR012W CRM1P30822 1084 aaKnown RBP4.67□□□□□ -1.66
VPS29YHR012W MKK2P32491 506 aa4.67□□□□□ -1.66
VPS29YHR012W OAR1P35731 278 aa4.67□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms