RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C TAT2P38967 592 aa7.79□□□□□ -1.16
SOD2YHR008C PRP39P39682 629 aaKnown RBP7.79□□□□□ -1.16
SOD2YHR008C LSM4P40070 187 aaKnown RBP7.79□□□□□ -1.16
SOD2YHR008C VRG4P40107 337 aa7.79□□□□□ -1.16
SOD2YHR008C YMR134WP40207 237 aa7.79□□□□□ -1.16
SOD2YHR008C VMA13P41807 478 aaKnown RBP7.79□□□□□ -1.16
SOD2YHR008C TIM54P47045 478 aa7.79□□□□□ -1.16
SOD2YHR008C BTN2P53286 410 aa7.79□□□□□ -1.16
SOD2YHR008C INN1P53901 409 aa7.79□□□□□ -1.16
SOD2YHR008C SOV1Q04748 898 aa7.79□□□□□ -1.16
SOD2YHR008C MMT2Q08970 484 aa7.79□□□□□ -1.16
SOD2YHR008C YMC1P32331 307 aa7.78□□□□□ -1.16
SOD2YHR008C KKQ8P36004 724 aa7.78□□□□□ -1.16
SOD2YHR008C SPC42P36094 363 aa7.78□□□□□ -1.16
SOD2YHR008C VPS52P39904 641 aa7.78□□□□□ -1.16
SOD2YHR008C BPL1P48445 690 aaPredicted RBP7.78□□□□□ -1.16
SOD2YHR008C MDM34P53083 459 aa7.78□□□□□ -1.16
SOD2YHR008C YMR210WQ03649 449 aa7.78□□□□□ -1.16
SOD2YHR008C REX3Q12090 404 aa7.78□□□□□ -1.16
SOD2YHR008C MDM32Q12171 622 aa7.78□□□□□ -1.16
SOD2YHR008C ICT1Q12385 394 aa7.78□□□□□ -1.16
SOD2YHR008C CDC21P06785 304 aa7.77□□□□□ -1.17
SOD2YHR008C PRP6P19735 899 aaPredicted RBP7.77□□□□□ -1.17
SOD2YHR008C MGR1P25573 417 aa7.77□□□□□ -1.17
SOD2YHR008C CMK1P27466 446 aaKnown RBP7.77□□□□□ -1.17
SOD2YHR008C CDC12P32468 407 aaKnown RBP7.77□□□□□ -1.17
SOD2YHR008C BEM3P32873 1128 aa7.77□□□□□ -1.17
SOD2YHR008C MNN1P39106 762 aa7.77□□□□□ -1.17
SOD2YHR008C STR2P47164 639 aa7.77□□□□□ -1.17
SOD2YHR008C RTA1P53047 317 aa7.77□□□□□ -1.17
SOD2YHR008C KXD1P53158 218 aa7.77□□□□□ -1.17
SOD2YHR008C ATG4P53867 494 aa7.77□□□□□ -1.17
SOD2YHR008C YOR032W-AQ8TGS1 66 aa7.77□□□□□ -1.17
SOD2YHR008C HSP26P15992 214 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
SOD2YHR008C TAH1P25638 111 aaPredicted RBP7.76□□□□□ -1.17
SOD2YHR008C DCG1P32460 244 aa7.76□□□□□ -1.17
SOD2YHR008C TCD1P38756 429 aa7.76□□□□□ -1.17
SOD2YHR008C HAT2P39984 401 aa7.76□□□□□ -1.17
SOD2YHR008C ICE2P40499 491 aa7.76□□□□□ -1.17
SOD2YHR008C BIO3P50277 480 aa7.76□□□□□ -1.17
SOD2YHR008C BCH1Q05029 724 aa7.76□□□□□ -1.17
SOD2YHR008C SYT1Q06836 1226 aa7.76□□□□□ -1.17
SOD2YHR008C CYK3Q07533 885 aa7.76□□□□□ -1.17
SOD2YHR008C BAG7Q12128 409 aa7.76□□□□□ -1.17
SOD2YHR008C STE2D6VTK4 431 aa7.75□□□□□ -1.17
SOD2YHR008C ERG1P32476 496 aaKnown RBP7.75□□□□□ -1.17
SOD2YHR008C NFU1P32860 256 aa7.75□□□□□ -1.17
SOD2YHR008C YBR062CP38239 180 aa7.75□□□□□ -1.17
SOD2YHR008C TDA11P38854 504 aa7.75□□□□□ -1.17
SOD2YHR008C FRT2P39734 528 aa7.75□□□□□ -1.17
SOD2YHR008C CEP3P40969 608 aa7.75□□□□□ -1.17
SOD2YHR008C ALF1P53904 254 aa7.75□□□□□ -1.17
SOD2YHR008C MOT3P54785 490 aaKnown RBP7.75□□□□□ -1.17
SOD2YHR008C NUP116Q02630 1113 aa7.75□□□□□ -1.17
SOD2YHR008C VAM6Q07468 1049 aa7.75□□□□□ -1.17
SOD2YHR008C RCN2Q12044 265 aa7.75□□□□□ -1.17
SOD2YHR008C MRH1Q12117 320 aaPredicted RBP7.75□□□□□ -1.17
SOD2YHR008C UPC2Q12151 913 aa7.75□□□□□ -1.17
SOD2YHR008C RAD57P25301 460 aa7.74□□□□□ -1.17
SOD2YHR008C URA10P30402 227 aa7.74□□□□□ -1.17
SOD2YHR008C OAR1P35731 278 aa7.74□□□□□ -1.17
SOD2YHR008C ALG3P38179 458 aa7.74□□□□□ -1.17
SOD2YHR008C NPT1P39683 429 aaKnown RBP7.74□□□□□ -1.17
SOD2YHR008C TPA1P40032 644 aaKnown RBP7.74□□□□□ -1.17
SOD2YHR008C APQ12P40532 138 aa7.74□□□□□ -1.17
SOD2YHR008C YFL012WP43580 148 aa7.74□□□□□ -1.17
SOD2YHR008C ALG12P53730 551 aa7.74□□□□□ -1.17
SOD2YHR008C YPL068CQ02749 293 aa7.74□□□□□ -1.17
SOD2YHR008C MTG1Q03151 367 aaPredicted RBP7.74□□□□□ -1.17
SOD2YHR008C TDA9Q04545 1251 aa7.74□□□□□ -1.17
SOD2YHR008C GLO2Q05584 274 aa7.74□□□□□ -1.17
SOD2YHR008C RRP42Q12277 265 aaPredicted RBP7.74□□□□□ -1.17
SOD2YHR008C STE3P06783 470 aa7.73□□□□□ -1.17
SOD2YHR008C MSS116P15424 664 aaKnown RBP7.73□□□□□ -1.17
SOD2YHR008C MLS1P30952 554 aa7.73□□□□□ -1.17
SOD2YHR008C SUI1P32911 108 aaKnown RBP7.73□□□□□ -1.17
SOD2YHR008C YKL100CP34248 587 aa7.73□□□□□ -1.17
SOD2YHR008C RSM22P36056 628 aa7.73□□□□□ -1.17
SOD2YHR008C EFM1P38732 585 aa7.73□□□□□ -1.17
SOD2YHR008C SPC97P38863 823 aa7.73□□□□□ -1.17
SOD2YHR008C SEH1P53011 349 aaKnown RBP7.73□□□□□ -1.17
SOD2YHR008C UTP13Q05946 817 aaKnown RBP7.73□□□□□ -1.17
SOD2YHR008C PUS9Q12069 462 aa7.73□□□□□ -1.17
SOD2YHR008C RGT2Q12300 763 aa7.73□□□□□ -1.17
SOD2YHR008C PAR32Q12515 295 aaKnown RBP7.73□□□□□ -1.17
SOD2YHR008C REC107P21651 314 aa7.72□□□□□ -1.17
SOD2YHR008C MRPL10P36520 322 aa7.72□□□□□ -1.17
SOD2YHR008C YHI9P38765 294 aa7.72□□□□□ -1.17
SOD2YHR008C YDR089WP38966 869 aa7.72□□□□□ -1.17
SOD2YHR008C GIP2P40036 548 aa7.72□□□□□ -1.17
SOD2YHR008C MET12P46151 657 aa7.72□□□□□ -1.17
SOD2YHR008C TEL2P53038 688 aa7.72□□□□□ -1.17
SOD2YHR008C PBP1P53297 722 aaKnown RBP7.72□□□□□ -1.17
SOD2YHR008C ATG21Q02887 496 aa7.72□□□□□ -1.17
SOD2YHR008C BOP2Q06150 570 aa7.72□□□□□ -1.17
SOD2YHR008C RPS21AP0C0V8 87 aaKnown RBP7.71□□□□□ -1.18
SOD2YHR008C CDC5P32562 705 aa7.71□□□□□ -1.18
SOD2YHR008C ASC1P38011 319 aaKnown RBP7.71□□□□□ -1.18
SOD2YHR008C MSG5P38590 489 aa7.71□□□□□ -1.18
SOD2YHR008C TOK1P40310 691 aa7.71□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms