RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W TIS11P47977 285 aa8.63□□□□□ -1.03
CPD1YGR247W LCL3P53153 274 aa8.63□□□□□ -1.03
CPD1YGR247W ERG13P54839 491 aaKnown RBP8.63□□□□□ -1.03
CPD1YGR247W YDR338CQ05497 695 aa8.63□□□□□ -1.03
CPD1YGR247W ADE13Q05911 482 aaKnown RBP8.63□□□□□ -1.03
CPD1YGR247W RRP42Q12277 265 aaPredicted RBP8.63□□□□□ -1.03
CPD1YGR247W RGT2Q12300 763 aa8.63□□□□□ -1.03
CPD1YGR247W FAS1P07149 2051 aaKnown RBP8.63□□□□□ -1.03
CPD1YGR247W STE3P06783 470 aa8.62□□□□□ -1.03
CPD1YGR247W TRX2P22803 104 aaKnown RBP8.62□□□□□ -1.03
CPD1YGR247W RIM1P32445 135 aaKnown RBP8.62□□□□□ -1.03
CPD1YGR247W KKQ8P36004 724 aa8.62□□□□□ -1.03
CPD1YGR247W SEC28P40509 296 aaKnown RBP8.62□□□□□ -1.03
CPD1YGR247W PHB1P40961 287 aa8.62□□□□□ -1.03
CPD1YGR247W OCA1P50946 238 aaPredicted RBP8.62□□□□□ -1.03
CPD1YGR247W HST2P53686 357 aa8.62□□□□□ -1.03
CPD1YGR247W PRP38Q00723 242 aaPredicted RBP8.62□□□□□ -1.03
CPD1YGR247W GOT1Q03554 138 aa8.62□□□□□ -1.03
CPD1YGR247W SPO20Q04359 397 aa8.62□□□□□ -1.03
CPD1YGR247W NOP6Q07623 225 aaKnown RBP8.62□□□□□ -1.03
CPD1YGR247W TPO4Q12256 659 aa8.62□□□□□ -1.03
CPD1YGR247W SRN2Q99176 213 aa8.62□□□□□ -1.03
CPD1YGR247W CHA1P25379 360 aaKnown RBP8.61□□□□□ -1.03
CPD1YGR247W PMT2P31382 759 aa8.61□□□□□ -1.03
CPD1YGR247W UBC6P33296 250 aaPredicted RBP8.61□□□□□ -1.03
CPD1YGR247W MFT1P33441 392 aaKnown RBP8.61□□□□□ -1.03
CPD1YGR247W RPS27AP35997 82 aaKnown RBP8.61□□□□□ -1.03
CPD1YGR247W RPS27BP38711 82 aa8.61□□□□□ -1.03
CPD1YGR247W MUP3P38734 546 aa8.61□□□□□ -1.03
CPD1YGR247W VRG4P40107 337 aa8.61□□□□□ -1.03
CPD1YGR247W YIL152WP40455 235 aa8.61□□□□□ -1.03
CPD1YGR247W NHP10Q03435 203 aa8.61□□□□□ -1.03
CPD1YGR247W NUP53Q03790 475 aa8.61□□□□□ -1.03
CPD1YGR247W CRN1Q06440 651 aa8.61□□□□□ -1.03
CPD1YGR247W YDL218WQ07629 317 aa8.61□□□□□ -1.03
CPD1YGR247W BDS1Q08347 646 aa8.61□□□□□ -1.03
CPD1YGR247W RPP2BP02400 110 aaKnown RBP8.6□□□□□ -1.03
CPD1YGR247W RPB4P20433 221 aaPredicted RBP8.6□□□□□ -1.03
CPD1YGR247W KIP2P28743 706 aa8.6□□□□□ -1.03
CPD1YGR247W GCG1P32656 232 aaKnown RBP8.6□□□□□ -1.03
CPD1YGR247W GPI16P38875 610 aa8.6□□□□□ -1.03
CPD1YGR247W YER034WP40022 185 aaKnown RBP8.6□□□□□ -1.03
CPD1YGR247W EMP65P40085 556 aa8.6□□□□□ -1.03
CPD1YGR247W CUP9P41817 306 aa8.6□□□□□ -1.03
CPD1YGR247W STB2P46679 850 aa8.6□□□□□ -1.03
CPD1YGR247W GCD14P46959 383 aaPredicted RBP8.6□□□□□ -1.03
CPD1YGR247W BUD32P53323 261 aa8.6□□□□□ -1.03
CPD1YGR247W YNL260CP53846 198 aa8.6□□□□□ -1.03
CPD1YGR247W FDC1Q03034 503 aa8.6□□□□□ -1.03
CPD1YGR247W YMR027WQ04371 470 aa8.6□□□□□ -1.03
CPD1YGR247W XYL2Q07993 356 aa8.6□□□□□ -1.03
CPD1YGR247W YOL159CQ08300 171 aa8.6□□□□□ -1.03
CPD1YGR247W MMT2Q08970 484 aa8.6□□□□□ -1.03
CPD1YGR247W YOR342CQ12182 319 aa8.6□□□□□ -1.03
CPD1YGR247W UBX3Q12229 455 aa8.6□□□□□ -1.03
CPD1YGR247W RPS21AP0C0V8 87 aaKnown RBP8.59□□□□□ -1.03
CPD1YGR247W PET123P17558 318 aa8.59□□□□□ -1.03
CPD1YGR247W MXR2P25566 168 aa8.59□□□□□ -1.03
CPD1YGR247W MGR1P25573 417 aa8.59□□□□□ -1.03
CPD1YGR247W PTM1P32857 523 aa8.59□□□□□ -1.03
CPD1YGR247W SDH3P33421 198 aa8.59□□□□□ -1.03
CPD1YGR247W AZF1P41696 914 aa8.59□□□□□ -1.03
CPD1YGR247W SNP1Q00916 300 aaPredicted RBP8.59□□□□□ -1.03
CPD1YGR247W VTI1Q04338 217 aa8.59□□□□□ -1.03
CPD1YGR247W VAM6Q07468 1049 aa8.59□□□□□ -1.03
CPD1YGR247W PUS7Q08647 676 aaKnown RBP8.59□□□□□ -1.03
CPD1YGR247W YPR011CQ12251 326 aa8.59□□□□□ -1.03
CPD1YGR247W GLO4Q12320 285 aa8.59□□□□□ -1.03
CPD1YGR247W AI3P03877 415 aa8.58□□□□□ -1.04
CPD1YGR247W KAR4P25583 335 aa8.58□□□□□ -1.04
CPD1YGR247W HXT4P32467 576 aa8.58□□□□□ -1.04
CPD1YGR247W CDC12P32468 407 aaKnown RBP8.58□□□□□ -1.04
CPD1YGR247W HXT6P39003 570 aaKnown RBP8.58□□□□□ -1.04
CPD1YGR247W HXT7P39004 570 aa8.58□□□□□ -1.04
CPD1YGR247W APQ12P40532 138 aa8.58□□□□□ -1.04
CPD1YGR247W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.58□□□□□ -1.04not detected
CPD1YGR247W TAF12Q03761 539 aa8.58□□□□□ -1.04
CPD1YGR247W IOC2Q12072 812 aa8.58□□□□□ -1.04
CPD1YGR247W NSI1Q12457 570 aa8.58□□□□□ -1.04
CPD1YGR247W GRR1P24814 1151 aa8.57□□□□□ -1.04
CPD1YGR247W TAH1P25638 111 aaPredicted RBP8.57□□□□□ -1.04
CPD1YGR247W CRM1P30822 1084 aaKnown RBP8.57□□□□□ -1.04
CPD1YGR247W ERG1P32476 496 aaKnown RBP8.57□□□□□ -1.04
CPD1YGR247W APT2P36973 181 aa8.57□□□□□ -1.04
CPD1YGR247W CCT4P39078 528 aaKnown RBP8.57□□□□□ -1.04
CPD1YGR247W PRP39P39682 629 aaKnown RBP8.57□□□□□ -1.04
CPD1YGR247W NDC80P40460 691 aa8.57□□□□□ -1.04
CPD1YGR247W SLT2Q00772 484 aa8.57□□□□□ -1.04
CPD1YGR247W YLR177WQ06251 628 aa8.57□□□□□ -1.04
CPD1YGR247W ENT4Q07872 247 aa8.57□□□□□ -1.04
CPD1YGR247W NBA1Q08229 501 aaKnown RBP8.57□□□□□ -1.04
CPD1YGR247W SEC14P24280 304 aaKnown RBP8.56□□□□□ -1.04
CPD1YGR247W YMC1P32331 307 aa8.56□□□□□ -1.04
CPD1YGR247W CDC5P32562 705 aa8.56□□□□□ -1.04
CPD1YGR247W ATO2P32907 282 aa8.56□□□□□ -1.04
CPD1YGR247W EAP1P36041 632 aaKnown RBP8.56□□□□□ -1.04
CPD1YGR247W HOS4P40480 1083 aa8.56□□□□□ -1.04
CPD1YGR247W INA22P40576 216 aa8.56□□□□□ -1.04
CPD1YGR247W TIM54P47045 478 aa8.56□□□□□ -1.04
CPD1YGR247W SHY1P53266 389 aa8.56□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 55.3 ms