RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W RPL15AP05748 204 aaKnown RBP3.21□□□□□ -1.9
LOC1YFR001W AMD1P15274 810 aaKnown RBP3.21□□□□□ -1.9
LOC1YFR001W PRD1P25375 712 aa3.21□□□□□ -1.9
LOC1YFR001W ATS1P31386 333 aa3.21□□□□□ -1.9
LOC1YFR001W NDC1P32500 655 aa3.21□□□□□ -1.9
LOC1YFR001W NPR2P39923 615 aa3.21□□□□□ -1.9
LOC1YFR001W ALK1P43633 760 aaKnown RBP3.21□□□□□ -1.9
LOC1YFR001W SCD6P45978 349 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
LOC1YFR001W AIM22P47051 409 aa3.21□□□□□ -1.9
LOC1YFR001W SLD5Q03406 294 aa3.21□□□□□ -1.9
LOC1YFR001W FIN1Q03898 291 aa3.21□□□□□ -1.9
LOC1YFR001W THP1Q08231 455 aa3.21□□□□□ -1.9
LOC1YFR001W MED1Q12321 566 aa3.21□□□□□ -1.9
LOC1YFR001W RRI2Q12348 645 aa3.21□□□□□ -1.9
LOC1YFR001W YBR298C-AQ8TGK4 73 aa3.21□□□□□ -1.9
LOC1YFR001W DFR1P07807 211 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
LOC1YFR001W PRP2P20095 876 aaPredicted RBP3.2□□□□□ -1.9
LOC1YFR001W SPC110P32380 944 aa3.2□□□□□ -1.9
LOC1YFR001W PTR2P32901 601 aa3.2□□□□□ -1.9
LOC1YFR001W WBP1P33767 430 aaKnown RBP3.2□□□□□ -1.9
LOC1YFR001W DUG2P38149 878 aa3.2□□□□□ -1.9
LOC1YFR001W SRO77P38163 1010 aa3.2□□□□□ -1.9
LOC1YFR001W TCM62P38228 572 aaKnown RBP3.2□□□□□ -1.9
LOC1YFR001W MDM31P38880 579 aa3.2□□□□□ -1.9
LOC1YFR001W TIF4631P39935 952 aaKnown RBP3.2□□□□□ -1.9
LOC1YFR001W RTT101P47050 842 aa3.2□□□□□ -1.9
LOC1YFR001W RBG2P53295 368 aaKnown RBP3.2□□□□□ -1.9
LOC1YFR001W RLI1Q03195 608 aaKnown RBP3.2□□□□□ -1.9
LOC1YFR001W ERP1Q05359 219 aaKnown RBP3.2□□□□□ -1.9
LOC1YFR001W YDL009CQ12210 107 aa3.2□□□□□ -1.9
LOC1YFR001W MTF1P14908 341 aaKnown RBP3.19□□□□□ -1.9
LOC1YFR001W YCR007CP25354 239 aa3.19□□□□□ -1.9
LOC1YFR001W PAP1P29468 568 aaKnown RBP3.19□□□□□ -1.9
LOC1YFR001W UTR4P32626 227 aa3.19□□□□□ -1.9
LOC1YFR001W FRE1P32791 686 aa3.19□□□□□ -1.9
LOC1YFR001W MRE11P32829 692 aa3.19□□□□□ -1.9
LOC1YFR001W MSN2P33748 704 aa3.19□□□□□ -1.9
LOC1YFR001W BNA4P38169 460 aa3.19□□□□□ -1.9
LOC1YFR001W MUM2P38236 366 aa3.19□□□□□ -1.9
LOC1YFR001W RPH1P39956 796 aa3.19□□□□□ -1.9
LOC1YFR001W RPR2P40571 144 aa3.19□□□□□ -1.9
LOC1YFR001W MET28P40573 187 aa3.19□□□□□ -1.9
LOC1YFR001W YFR016CP43597 1233 aaKnown RBP3.19□□□□□ -1.9
LOC1YFR001W COS10P52924 374 aa3.19□□□□□ -1.9
LOC1YFR001W HEF3P53978 1044 aaKnown RBP3.19□□□□□ -1.9
LOC1YFR001W MFB1Q04922 465 aa3.19□□□□□ -1.9
LOC1YFR001W IVY1Q04934 453 aa3.19□□□□□ -1.9
LOC1YFR001W PPT2Q12036 173 aa3.19□□□□□ -1.9
LOC1YFR001W FOB1O13329 566 aa3.18□□□□□ -1.9
LOC1YFR001W CAR1P00812 333 aaKnown RBP3.18□□□□□ -1.9
LOC1YFR001W PRP16P15938 1071 aaPredicted RBP3.18□□□□□ -1.9
LOC1YFR001W OCA4P25366 362 aa3.18□□□□□ -1.9
LOC1YFR001W YCR022CP25620 114 aa3.18□□□□□ -1.9
LOC1YFR001W BUD14P27637 709 aa3.18□□□□□ -1.9
LOC1YFR001W YME1P32795 747 aa3.18□□□□□ -1.9
LOC1YFR001W MTC4P38335 694 aaKnown RBP3.18□□□□□ -1.9
LOC1YFR001W KRE9P39005 276 aa3.18□□□□□ -1.9
LOC1YFR001W YEL057CP39983 233 aa3.18□□□□□ -1.9
LOC1YFR001W SPO22P40511 975 aa3.18□□□□□ -1.9
LOC1YFR001W DOT5P40553 215 aa3.18□□□□□ -1.9
LOC1YFR001W PET130P47065 347 aa3.18□□□□□ -1.9
LOC1YFR001W ZPR1P53303 486 aaKnown RBP3.18□□□□□ -1.9
LOC1YFR001W MRPL51Q06090 140 aaPredicted RBP3.18□□□□□ -1.9
LOC1YFR001W PHO92Q06390 306 aa3.18□□□□□ -1.9
LOC1YFR001W AYT1Q12226 474 aa3.18□□□□□ -1.9
LOC1YFR001W SET6Q12529 373 aa3.18□□□□□ -1.9
LOC1YFR001W GDH1P07262 454 aaKnown RBP3.17□□□□□ -1.9
LOC1YFR001W MCK1P21965 375 aaKnown RBP3.17□□□□□ -1.9
LOC1YFR001W YJL213WP40896 331 aa3.17□□□□□ -1.9
LOC1YFR001W RMD8P43620 662 aa3.17□□□□□ -1.9
LOC1YFR001W YDL186WP48568 277 aa3.17□□□□□ -1.9
LOC1YFR001W SUB1P54000 292 aaKnown RBP3.17□□□□□ -1.9
LOC1YFR001W TIM10P87108 93 aa3.17□□□□□ -1.9
LOC1YFR001W RPT6Q01939 405 aaKnown RBP3.17□□□□□ -1.9
LOC1YFR001W YDR239CQ03780 787 aa3.17□□□□□ -1.9
LOC1YFR001W LSP1Q12230 341 aaKnown RBP3.17□□□□□ -1.9
LOC1YFR001W ARG3P05150 338 aa3.16□□□□□ -1.9
LOC1YFR001W COR1P07256 457 aa3.16□□□□□ -1.9
LOC1YFR001W HSC82P15108 705 aaKnown RBP3.16□□□□□ -1.9
LOC1YFR001W MBB1P39534 108 aa3.16□□□□□ -1.9
LOC1YFR001W CAF130P53280 1122 aaPredicted RBP3.16□□□□□ -1.9
LOC1YFR001W GPI1P53306 609 aa3.16□□□□□ -1.9
LOC1YFR001W IMP4P53941 290 aaKnown RBP3.16□□□□□ -1.9
LOC1YFR001W IRC15Q02733 499 aa3.16□□□□□ -1.9
LOC1YFR001W RBS1Q05672 457 aaKnown RBP3.16□□□□□ -1.9
LOC1YFR001W VPS74Q06385 345 aa3.16□□□□□ -1.9
LOC1YFR001W SEC39Q12745 709 aa3.16□□□□□ -1.9
LOC1YFR001W CYB2P00175 591 aa3.15□□□□□ -1.91
LOC1YFR001W RPL20AP0CX23 172 aaKnown RBP3.15□□□□□ -1.91
LOC1YFR001W RPL20BP0CX24 172 aaPredicted RBP3.15□□□□□ -1.91
LOC1YFR001W EXO70P19658 623 aa3.15□□□□□ -1.91
LOC1YFR001W AGA1P32323 725 aa3.15□□□□□ -1.91
LOC1YFR001W SWE1P32944 819 aa3.15□□□□□ -1.91
LOC1YFR001W CST26P38226 397 aa3.15□□□□□ -1.91
LOC1YFR001W KEL1P38853 1164 aaKnown RBP3.15□□□□□ -1.91
LOC1YFR001W ERP2P39704 215 aa3.15□□□□□ -1.91
LOC1YFR001W HAT2P39984 401 aa3.15□□□□□ -1.91
LOC1YFR001W SHO1P40073 367 aa3.15□□□□□ -1.91
LOC1YFR001W ROK1P45818 564 aaPredicted RBP3.15□□□□□ -1.91
LOC1YFR001W SLG1P54867 378 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms