RNA–Protein interactions for RNA: YEL004W

YEA4, Transcript of Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter, yeast

Gene YEA4, Length 1,029 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEA4	YEL004W	YBL029W	P38201	376 aa		3.49	□□□□□ -1.85
YEA4	YEL004W	AFG3	P39925	761 aa		3.49	□□□□□ -1.85
YEA4	YEL004W	YML037C	Q03703	340 aa		3.49	□□□□□ -1.85
YEA4	YEL004W	SSP2	Q08646	371 aa		3.49	□□□□□ -1.85
YEA4	YEL004W	RPL19A	P0CX82	189 aa	Known RBP	3.48	□□□□□ -1.85
YEA4	YEL004W	RPL19B	P0CX83	189 aa	Predicted RBP	3.48	□□□□□ -1.85
YEA4	YEL004W	EXO70	P19658	623 aa		3.48	□□□□□ -1.85
YEA4	YEL004W	PUT3	P25502	979 aa	Predicted RBP	3.48	□□□□□ -1.85
YEA4	YEL004W	FUN19	P28003	413 aa	Predicted RBP	3.48	□□□□□ -1.85
YEA4	YEL004W	HAT2	P39984	401 aa		3.48	□□□□□ -1.85
YEA4	YEL004W	DRN1	P53255	507 aa	Known RBP	3.48	□□□□□ -1.85
YEA4	YEL004W	FMP40	Q08968	688 aa	Predicted RBP	3.48	□□□□□ -1.85
YEA4	YEL004W	LSP1	Q12230	341 aa	Known RBP	3.48	□□□□□ -1.85
YEA4	YEL004W	SPE4	Q12455	300 aa		3.48	□□□□□ -1.85
YEA4	YEL004W	CTF3	Q12748	733 aa		3.48	□□□□□ -1.85
YEA4	YEL004W	HSH49	Q99181	213 aa	Predicted RBP	3.48	□□□□□ -1.85
YEA4	YEL004W	SUC2	P00724	532 aa		3.47	□□□□□ -1.85
YEA4	YEL004W	LPD1	P09624	499 aa	Known RBP	3.47	□□□□□ -1.85
YEA4	YEL004W	KAR3	P17119	729 aa		3.47	□□□□□ -1.85
YEA4	YEL004W	YCK1	P23291	538 aa		3.47	□□□□□ -1.85
YEA4	YEL004W	POL4	P25615	582 aa		3.47	□□□□□ -1.85
YEA4	YEL004W	YEL045C	P32616	141 aa		3.47	□□□□□ -1.85
YEA4	YEL004W	FUI1	P38196	639 aa		3.47	□□□□□ -1.85
YEA4	YEL004W	MTC6	P38849	526 aa		3.47	□□□□□ -1.85
YEA4	YEL004W	HEL2	Q05580	639 aa	Known RBP	3.47	□□□□□ -1.85
YEA4	YEL004W	PEP4	P07267	405 aa	Known RBP	3.46	□□□□□ -1.86
YEA4	YEL004W	ART10	P18634	518 aa	Known RBP	3.46	□□□□□ -1.86
YEA4	YEL004W	CHS3	P29465	1165 aa		3.46	□□□□□ -1.86
YEA4	YEL004W	RFS1	P38234	210 aa	Known RBP	3.46	□□□□□ -1.86
YEA4	YEL004W	PHO92	Q06390	306 aa		3.46	□□□□□ -1.86
YEA4	YEL004W	YER078W-A	Q3E7A2	54 aa		3.46	□□□□□ -1.86
YEA4	YEL004W	SHP1	P34223	423 aa		3.45	□□□□□ -1.86
YEA4	YEL004W	PTH1	P38876	190 aa	Known RBP	3.45	□□□□□ -1.86
YEA4	YEL004W	ELP2	P42935	788 aa		3.45	□□□□□ -1.86
YEA4	YEL004W	LCL3	P53153	274 aa		3.45	□□□□□ -1.86
YEA4	YEL004W	TOF2	Q02208	771 aa		3.45	□□□□□ -1.86
YEA4	YEL004W	THP1	Q08231	455 aa		3.45	□□□□□ -1.86
YEA4	YEL004W	MRP13	P12686	339 aa		3.44	□□□□□ -1.86
YEA4	YEL004W	CPR1	P14832	162 aa	Known RBP	3.44	□□□□□ -1.86
YEA4	YEL004W	RNA14	P25298	677 aa	Known RBP	3.44	□□□□□ -1.86
YEA4	YEL004W	DUG2	P38149	878 aa		3.44	□□□□□ -1.86
YEA4	YEL004W	LYS14	P40971	790 aa		3.44	□□□□□ -1.86
YEA4	YEL004W	ALK1	P43633	760 aa	Known RBP	3.44	□□□□□ -1.86
YEA4	YEL004W	GWT1	P47026	490 aa		3.44	□□□□□ -1.86
YEA4	YEL004W	GPI1	P53306	609 aa		3.44	□□□□□ -1.86
YEA4	YEL004W	YMR018W	Q04364	514 aa		3.44	□□□□□ -1.86
YEA4	YEL004W	YOR387C	Q08910	206 aa		3.44	□□□□□ -1.86
YEA4	YEL004W	YBR126W-A	Q8TGU7	68 aa		3.44	□□□□□ -1.86
YEA4	YEL004W	SGS1	P35187	1447 aa		3.44	□□□□□ -1.86
YEA4	YEL004W	SPT15	P13393	240 aa	Known RBP	3.43	□□□□□ -1.86
YEA4	YEL004W	DEG1	P31115	442 aa	Known RBP	3.43	□□□□□ -1.86
YEA4	YEL004W	HXT1	P32465	570 aa		3.43	□□□□□ -1.86
YEA4	YEL004W	BNA4	P38169	460 aa		3.43	□□□□□ -1.86
YEA4	YEL004W	TCM62	P38228	572 aa	Known RBP	3.43	□□□□□ -1.86
YEA4	YEL004W	TIF4631	P39935	952 aa	Known RBP	3.43	□□□□□ -1.86
YEA4	YEL004W	IPI3	P53877	555 aa		3.43	□□□□□ -1.86
YEA4	YEL004W	PAL1	Q05518	499 aa	Known RBP	3.43	□□□□□ -1.86
YEA4	YEL004W	OPY2	Q06810	360 aa		3.43	□□□□□ -1.86
YEA4	YEL004W	RRP12	Q12754	1228 aa	Known RBP	3.43	□□□□□ -1.86
YEA4	YEL004W	EST1	P17214	699 aa	Predicted RBP	3.42	□□□□□ -1.86
YEA4	YEL004W	MRP4	P32902	394 aa		3.42	□□□□□ -1.86
YEA4	YEL004W	ALG5	P40350	334 aa		3.42	□□□□□ -1.86
YEA4	YEL004W	BTN2	P53286	410 aa		3.42	□□□□□ -1.86
YEA4	YEL004W	YKU80	Q04437	629 aa		3.42	□□□□□ -1.86
YEA4	YEL004W	RBS1	Q05672	457 aa	Known RBP	3.42	□□□□□ -1.86
YEA4	YEL004W	COQ9	Q05779	260 aa		3.42	□□□□□ -1.86
YEA4	YEL004W	TMC1	Q08422	150 aa	Predicted RBP	3.42	□□□□□ -1.86
YEA4	YEL004W	HUA2	Q12134	243 aa		3.42	□□□□□ -1.86
YEA4	YEL004W	NOP58	Q12499	511 aa	Known RBP	3.42	□□□□□ -1.86
YEA4	YEL004W	GLK1	P17709	500 aa	Known RBP	3.41	□□□□□ -1.86
YEA4	YEL004W	MSN2	P33748	704 aa		3.41	□□□□□ -1.86
YEA4	YEL004W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.41	□□□□□ -1.86	not detected
YEA4	YEL004W	YBL059W	P34224	193 aa		3.41	□□□□□ -1.86
YEA4	YEL004W	SEF1	P34228	1148 aa		3.41	□□□□□ -1.86
YEA4	YEL004W	CCT6	P39079	546 aa		3.41	□□□□□ -1.86
YEA4	YEL004W	MEP3	P53390	489 aa		3.41	□□□□□ -1.86
YEA4	YEL004W	RRN11	Q04712	507 aa		3.41	□□□□□ -1.86
YEA4	YEL004W	YEH1	Q07804	573 aa		3.41	□□□□□ -1.86
YEA4	YEL004W	CFT2	Q12102	859 aa	Predicted RBP	3.41	□□□□□ -1.86
YEA4	YEL004W	CDC16	P09798	840 aa		3.4	□□□□□ -1.87
YEA4	YEL004W	TRX2	P22803	104 aa	Known RBP	3.4	□□□□□ -1.87
YEA4	YEL004W	NAM9	P27929	486 aa		3.4	□□□□□ -1.87
YEA4	YEL004W	YME1	P32795	747 aa		3.4	□□□□□ -1.87
YEA4	YEL004W	NDT80	P38830	627 aa		3.4	□□□□□ -1.87
YEA4	YEL004W	VID30	P53076	958 aa		3.4	□□□□□ -1.87
YEA4	YEL004W	DUO1	P53168	247 aa	Known RBP	3.4	□□□□□ -1.87
YEA4	YEL004W	ZPR1	P53303	486 aa	Known RBP	3.4	□□□□□ -1.87
YEA4	YEL004W	HEF3	P53978	1044 aa	Known RBP	3.4	□□□□□ -1.87
YEA4	YEL004W	PIR3	Q03180	325 aa		3.4	□□□□□ -1.87
YEA4	YEL004W	YPT6	Q99260	215 aa		3.4	□□□□□ -1.87
YEA4	YEL004W	HIP1	P06775	603 aa		3.39	□□□□□ -1.87
YEA4	YEL004W	YIM1	P28625	365 aa		3.39	□□□□□ -1.87
YEA4	YEL004W	PAP1	P29468	568 aa	Known RBP	3.39	□□□□□ -1.87
YEA4	YEL004W	MSR1	P38714	643 aa		3.39	□□□□□ -1.87
YEA4	YEL004W	YFL067W	P43537	175 aa		3.39	□□□□□ -1.87
YEA4	YEL004W	TIS11	P47977	285 aa		3.39	□□□□□ -1.87
YEA4	YEL004W	CAF40	P53829	373 aa		3.39	□□□□□ -1.87
YEA4	YEL004W	NGL3	Q03210	505 aa		3.39	□□□□□ -1.87
YEA4	YEL004W	NMD4	Q12129	218 aa		3.39	□□□□□ -1.87
YEA4	YEL004W	HEM15	P16622	393 aa		3.38	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms