RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 JMYQ8N9B5 988 aa14.13□□□□□ -0.15
LINC00339-213ENST00000642137 BRMS1Q9HCU9 246 aa14.13□□□□□ -0.15
LINC00339-213ENST00000642137 M0R2N6 131 aa14.12□□□□□ -0.15
LINC00339-213ENST00000642137 GPR25O00155 361 aa14.12□□□□□ -0.15
LINC00339-213ENST00000642137 FOSP01100 380 aaPredicted RBP14.12□□□□□ -0.15
LINC00339-213ENST00000642137 FCER1AP12319 257 aa14.12□□□□□ -0.15
LINC00339-213ENST00000642137 BAATQ14032 418 aaPredicted RBP14.12□□□□□ -0.15
LINC00339-213ENST00000642137 USP17L6PQ6QN14 398 aa14.12□□□□□ -0.15
LINC00339-213ENST00000642137 NSMFQ6X4W1 530 aa14.12□□□□□ -0.15
LINC00339-213ENST00000642137 GPR142Q7Z601 462 aa14.12□□□□□ -0.15
LINC00339-213ENST00000642137 PLEKHH3Q7Z736 793 aa14.12□□□□□ -0.15
LINC00339-213ENST00000642137 ANKRD35Q8N283 1001 aa14.12□□□□□ -0.15
LINC00339-213ENST00000642137 MMP19Q99542 508 aa14.12□□□□□ -0.15
LINC00339-213ENST00000642137 FOXP1Q9H334 677 aaPredicted RBP14.12□□□□□ -0.15
LINC00339-213ENST00000642137 CYP39A1Q9NYL5 469 aa14.12□□□□□ -0.15
LINC00339-213ENST00000642137 PCDHA6Q9UN73 950 aa14.12□□□□□ -0.15
LINC00339-213ENST00000642137 PCDHA8Q9Y5H6 950 aa14.12□□□□□ -0.15
LINC00339-213ENST00000642137 PFASO15067 1338 aa14.12□□□□□ -0.15
LINC00339-213ENST00000642137 SLC15A5A6NIM6 579 aa14.11□□□□□ -0.15
LINC00339-213ENST00000642137 BTBD18B2RXH4 712 aa14.11□□□□□ -0.15
LINC00339-213ENST00000642137 PTPREP23469 700 aa14.11□□□□□ -0.15
LINC00339-213ENST00000642137 U2AF2P26368 475 aaKnown RBP eCLIP14.11□□□□□ -0.15
LINC00339-213ENST00000642137 RPS6P62753 249 aaKnown RBP14.11□□□□□ -0.15
LINC00339-213ENST00000642137 NUCB2P80303 420 aa14.11□□□□□ -0.15
LINC00339-213ENST00000642137 KCTD2Q14681 263 aa14.11□□□□□ -0.15
LINC00339-213ENST00000642137 KIF22Q14807 665 aa14.11□□□□□ -0.15
LINC00339-213ENST00000642137 WDR78Q5VTH9 848 aa14.11□□□□□ -0.15
LINC00339-213ENST00000642137 DIS3L2Q8IYB7 885 aaKnown RBP14.11□□□□□ -0.15
LINC00339-213ENST00000642137 A1CFQ9NQ94 594 aaKnown RBP14.11□□□□□ -0.15
LINC00339-213ENST00000642137 BIN2Q9UBW5 565 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-213ENST00000642137 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-213ENST00000642137 MTMR6Q9Y217 621 aa14.11□□□□□ -0.15
LINC00339-213ENST00000642137 IVNS1ABPQ9Y6Y0 642 aa14.11□□□□□ -0.15
LINC00339-213ENST00000642137 VPS37CA5D8V6 355 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-213ENST00000642137 ADAMTS3O15072 1205 aa14.1□□□□□ -0.15
LINC00339-213ENST00000642137 FKTNO75072 461 aa14.1□□□□□ -0.15
LINC00339-213ENST00000642137 FCGRTP55899 365 aa14.1□□□□□ -0.15
LINC00339-213ENST00000642137 LACTBP83111 547 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-213ENST00000642137 AP3B2Q13367 1082 aa14.1□□□□□ -0.15
LINC00339-213ENST00000642137 UBE2SQ16763 222 aa14.1□□□□□ -0.15
LINC00339-213ENST00000642137 REXO1Q8N1G1 1221 aaKnown RBP14.1□□□□□ -0.15
LINC00339-213ENST00000642137 OXER1Q8TDS5 423 aa14.1□□□□□ -0.15
LINC00339-213ENST00000642137 SYTL5Q8TDW5 730 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-213ENST00000642137 TNFRSF25Q93038 417 aa14.1□□□□□ -0.15
LINC00339-213ENST00000642137 ZSCAN16Q9H4T2 348 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-213ENST00000642137 MGAMO43451 1857 aa14.1□□□□□ -0.15
LINC00339-213ENST00000642137 DOCK3Q8IZD9 2030 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 DNAJC25-GNG10A0A024R161 153 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 SPDYE3A6NKU9 549 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 POTEB2H3BUK9 544 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 BRD1O95696 1058 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 ZSCAN22P10073 491 aaPredicted RBP14.09□□□□□ -0.15
LINC00339-213ENST00000642137 HOXA13P31271 388 aaPredicted RBP14.09□□□□□ -0.15
LINC00339-213ENST00000642137 PSMC4P43686 418 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 GNL2Q13823 731 aaKnown RBP14.09□□□□□ -0.15
LINC00339-213ENST00000642137 GRB14Q14449 540 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 ARHGEF6Q15052 776 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 MORN1Q5T089 497 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 JAKMIP3Q5VZ66 844 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 MCTP1Q6DN14 999 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 KRT25Q7Z3Z0 450 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 FAM133AQ8N9E0 248 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 DNERQ8NFT8 737 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 TAAR1Q96RJ0 339 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 TMEM260Q9NX78 707 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 GJD2Q9UKL4 321 aa14.09□□□□□ -0.15
LINC00339-213ENST00000642137 DIS3Q9Y2L1 958 aaKnown RBP14.09□□□□□ -0.15
LINC00339-213ENST00000642137 LOC102724159A0A0B4J2E5 919 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 CCDC194A0A1B0GVG4 234 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 TNPO2O14787 897 aaKnown RBP14.08□□□□□ -0.16
LINC00339-213ENST00000642137 GNRH1P01148 92 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 CTGFP29279 349 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 NR5A1Q13285 461 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 PWP2Q15269 919 aaKnown RBP14.08□□□□□ -0.16
LINC00339-213ENST00000642137 SLC30A10Q6XR72 485 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 FCHSD1Q86WN1 690 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 NOSTRINQ8IVI9 506 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 RASGRP4Q8TDF6 673 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 USP6NLQ92738 828 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 ERO1AQ96HE7 468 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 NUDT12Q9BQG2 462 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 EHMT1Q9H9B1 1298 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 SLC5A4Q9NY91 659 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 CHMP5Q9NZZ3 219 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 COL20A1Q9P218 1284 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 ZDHHC9Q9Y397 364 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 PLXNB2O15031 1838 aa14.08□□□□□ -0.16
LINC00339-213ENST00000642137 RBBP6Q7Z6E9 1792 aaKnown RBP14.07□□□□□ -0.16
LINC00339-213ENST00000642137 B4DLN1 442 aa14.07□□□□□ -0.16
LINC00339-213ENST00000642137 KIF28PB7ZC32 967 aa14.07□□□□□ -0.16
LINC00339-213ENST00000642137 COBLO75128 1261 aa14.07□□□□□ -0.16
LINC00339-213ENST00000642137 HOXD10P28358 340 aa14.07□□□□□ -0.16
LINC00339-213ENST00000642137 ADORA2AP29274 412 aa14.07□□□□□ -0.16
LINC00339-213ENST00000642137 MAP2K5Q13163 448 aa14.07□□□□□ -0.16
LINC00339-213ENST00000642137 PKP1Q13835 747 aa14.07□□□□□ -0.16
LINC00339-213ENST00000642137 NONOQ15233 471 aaKnown RBP eCLIP14.07□□□□□ -0.16
LINC00339-213ENST00000642137 ZNF792Q3KQV3 632 aa14.07□□□□□ -0.16
LINC00339-213ENST00000642137 BRAPQ7Z569 592 aa14.07□□□□□ -0.16
LINC00339-213ENST00000642137 DPP9Q86TI2 863 aa14.07□□□□□ -0.16
LINC00339-213ENST00000642137 NSUN6Q8TEA1 469 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms