RNA–Protein interactions for RNA: ENST00000641923.1

SAMMSON-223, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, human

Gene SAMMSON, Length 1,213 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMMSON-223	ENST00000641923	USH1G	Q495M9	461 aa		10.29	□□□□□ -0.76
SAMMSON-223	ENST00000641923	REXO1	Q8N1G1	1221 aa	Known RBP	10.29	□□□□□ -0.76
SAMMSON-223	ENST00000641923	ANKRD13C	Q8N6S4	541 aa		10.29	□□□□□ -0.76
SAMMSON-223	ENST00000641923	SOCS4	Q8WXH5	440 aa		10.29	□□□□□ -0.76
SAMMSON-223	ENST00000641923	TRERF1	Q96PN7	1200 aa		10.29	□□□□□ -0.76
SAMMSON-223	ENST00000641923	NAP1L4	Q99733	375 aa	Known RBP	10.29	□□□□□ -0.76
SAMMSON-223	ENST00000641923	PHF20	Q9BVI0	1012 aa		10.29	□□□□□ -0.76
SAMMSON-223	ENST00000641923	FOXP1	Q9H334	677 aa	Predicted RBP	10.29	□□□□□ -0.76
SAMMSON-223	ENST00000641923	CPVL	Q9H3G5	476 aa		10.29	□□□□□ -0.76
SAMMSON-223	ENST00000641923	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.29	□□□□□ -0.76
SAMMSON-223	ENST00000641923	PSTPIP2	Q9H939	334 aa		10.29	□□□□□ -0.76
SAMMSON-223	ENST00000641923	PCDHA4	Q9UN74	947 aa		10.29	□□□□□ -0.76
SAMMSON-223	ENST00000641923	ATP6V1D	Q9Y5K8	247 aa		10.29	□□□□□ -0.76
SAMMSON-223	ENST00000641923	SMCO2	A6NFE2	343 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	SPDYE3	A6NKU9	549 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	STX6	O43752	255 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	MMP1	P03956	469 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	POLR2M	P0CAP2	368 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	FCER1A	P12319	257 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	HOXD10	P28358	340 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	KRT2	P35908	639 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	KRT40	Q6A162	431 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	BRAP	Q7Z569	592 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	NCAPG2	Q86XI2	1143 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	DNER	Q8NFT8	737 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	PIBF1	Q8WXW3	757 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	COA7	Q96BR5	231 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	AGBL1	Q96MI9	1066 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	MOV10L1	Q9BXT6	1211 aa	Known RBP	10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	RNF186	Q9NXI6	227 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	BTBD7	Q9P203	1132 aa		10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	ADD3	Q9UEY8	706 aa	Known RBP	10.28	□□□□□ -0.76
SAMMSON-223	ENST00000641923	MGAM	O43451	1857 aa		10.27	□□□□□ -0.76
SAMMSON-223	ENST00000641923	ZNFX1	Q9P2E3	1918 aa	Known RBP	10.27	□□□□□ -0.76
SAMMSON-223	ENST00000641923	CASP8AP2	Q9UKL3	1982 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	SLC15A5	A6NIM6	579 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	CNMD	O75829	334 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	ERCC3	P19447	782 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	PTMS	P20962	102 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	SYT1	P21579	422 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	HSD17B4	P51659	736 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	PRMT2	P55345	433 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	FCGRT	P55899	365 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	SP3	Q02447	781 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	XRRA1	Q6P2D8	792 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	RNF207	Q6ZRF8	634 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	KRT25	Q7Z3Z0	450 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	BLID	Q8IZY5	108 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	ANKRD35	Q8N283	1001 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	ERO1A	Q96HE7	468 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	ZIC5	Q96T25	663 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	VPS54	Q9P1Q0	977 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	DIS3	Q9Y2L1	958 aa	Known RBP	10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	PLXNB2	O15031	1838 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	SMCHD1	A6NHR9	2005 aa		10.27	□□□□□ -0.77
SAMMSON-223	ENST00000641923	CCDC194	A0A1B0GVG4	234 aa		10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	hCG_1642624	A0A1W2PR95	340 aa		10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	PPP1R11	O60927	126 aa	Predicted RBP	10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	TRPA1	O75762	1119 aa		10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	STAM2	O75886	525 aa		10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	CFB	P00751	764 aa		10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	U2AF2	P26368	475 aa	Known RBP eCLIP	10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	TRAPPC10	P48553	1259 aa		10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	ORC2	Q13416	577 aa	Predicted RBP	10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	IRF5	Q13568	498 aa		10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	ATL3	Q6DD88	541 aa		10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	PLEKHH3	Q7Z736	793 aa		10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	DIS3L2	Q8IYB7	885 aa	Known RBP	10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	TRMT44	Q8IYL2	757 aa	Known RBP	10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	MSL3	Q8N5Y2	521 aa	Known RBP	10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	JMY	Q8N9B5	988 aa		10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	MMP19	Q99542	508 aa		10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	TXNRD2	Q9NNW7	524 aa		10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	HOMER2	Q9NSB8	354 aa		10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	WBP1L	Q9NX94	342 aa		10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	CPA4	Q9UI42	421 aa		10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	NOL7	Q9UMY1	257 aa	Known RBP	10.26	□□□□□ -0.77
SAMMSON-223	ENST00000641923	VPS37C	A5D8V6	355 aa	Predicted RBP	10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	TNPO2	O14787	897 aa	Known RBP	10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	FKTN	O75072	461 aa		10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	CLK2	P49760	499 aa	Known RBP	10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	SNAP25	P60880	206 aa		10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	HTRA3	P83110	453 aa		10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	LACTB	P83111	547 aa	Predicted RBP	10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	NONO	Q15233	471 aa	Known RBP eCLIP	10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	RILPL1	Q5EBL4	403 aa		10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	WDR78	Q5VTH9	848 aa		10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	MOXD1	Q6UVY6	613 aa		10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	NSMF	Q6X4W1	530 aa		10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	GPR142	Q7Z601	462 aa		10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	DNAJC5G	Q8N7S2	189 aa		10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	NSUN6	Q8TEA1	469 aa	Known RBP	10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	CLEC4D	Q8WXI8	215 aa		10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	IWS1	Q96ST2	819 aa		10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	MAP7D2	Q96T17	732 aa		10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	NUDT12	Q9BQG2	462 aa		10.25	□□□□□ -0.77
SAMMSON-223	ENST00000641923	A1CF	Q9NQ94	594 aa	Known RBP	10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms