RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 PLIN4Q96Q06 1357 aa17.85■□□□□ 0.45
SRRM4-204ENST00000641899 LRFN3Q9BTN0 628 aa17.85■□□□□ 0.45
SRRM4-204ENST00000641899 CCPG1Q9ULG6 757 aa17.85■□□□□ 0.45
SRRM4-204ENST00000641899 NKRFO15226 690 aaKnown RBP eCLIP17.84■□□□□ 0.45
SRRM4-204ENST00000641899 CHGBP05060 677 aa17.84■□□□□ 0.45
SRRM4-204ENST00000641899 MYL3P08590 195 aa17.84■□□□□ 0.45
SRRM4-204ENST00000641899 CYP2C9P11712 490 aa17.84■□□□□ 0.45
SRRM4-204ENST00000641899 KCNJ6P48051 423 aa17.84■□□□□ 0.45
SRRM4-204ENST00000641899 TFAP4Q01664 338 aa17.84■□□□□ 0.45
SRRM4-204ENST00000641899 PTPN11Q06124 597 aaPredicted RBP17.84■□□□□ 0.45
SRRM4-204ENST00000641899 NFRKBQ6P4R8 1299 aa17.84■□□□□ 0.45
SRRM4-204ENST00000641899 WDR11Q9BZH6 1224 aa17.84■□□□□ 0.45
SRRM4-204ENST00000641899 PDGFCQ9NRA1 345 aa17.84■□□□□ 0.45
SRRM4-204ENST00000641899 ZBTB40Q9NUA8 1239 aa17.84■□□□□ 0.45
SRRM4-204ENST00000641899 TRMT13Q9NUP7 481 aaKnown RBP17.84■□□□□ 0.45
SRRM4-204ENST00000641899 STX8Q9UNK0 236 aa17.84■□□□□ 0.45
SRRM4-204ENST00000641899 ZNF536O15090 1300 aa17.83■□□□□ 0.44
SRRM4-204ENST00000641899 BAZ2AQ9UIF9 1905 aaKnown RBP17.83■□□□□ 0.44
SRRM4-204ENST00000641899 TLL1O43897 1013 aa17.83■□□□□ 0.44
SRRM4-204ENST00000641899 MCCP23508 829 aa17.83■□□□□ 0.44
SRRM4-204ENST00000641899 PURAQ00577 322 aaKnown RBP17.83■□□□□ 0.44
SRRM4-204ENST00000641899 RCSD1Q6JBY9 416 aa17.83■□□□□ 0.44
SRRM4-204ENST00000641899 HERC6Q8IVU3 1022 aa17.83■□□□□ 0.44
SRRM4-204ENST00000641899 OR6J1Q8NGC5 347 aa17.83■□□□□ 0.44
SRRM4-204ENST00000641899 MORC4Q8TE76 937 aa17.83■□□□□ 0.44
SRRM4-204ENST00000641899 OSBP2Q969R2 916 aa17.83■□□□□ 0.44
SRRM4-204ENST00000641899 NAPBQ9H115 298 aa17.83■□□□□ 0.44
SRRM4-204ENST00000641899 CERS4Q9HA82 394 aa17.83■□□□□ 0.44
SRRM4-204ENST00000641899 LMCD1Q9NZU5 365 aa17.83■□□□□ 0.44
SRRM4-204ENST00000641899 TSPY2A6NKD2 308 aa17.82■□□□□ 0.44
SRRM4-204ENST00000641899 GPR37L1O60883 481 aa17.82■□□□□ 0.44
SRRM4-204ENST00000641899 PARNO95453 639 aaKnown RBP17.82■□□□□ 0.44
SRRM4-204ENST00000641899 ICAM1P05362 532 aa17.82■□□□□ 0.44
SRRM4-204ENST00000641899 SIRT2Q8IXJ6 389 aa17.82■□□□□ 0.44
SRRM4-204ENST00000641899 IFNL3Q8IZI9 196 aa17.82■□□□□ 0.44
SRRM4-204ENST00000641899 ZBED2Q9BTP6 218 aa17.82■□□□□ 0.44
SRRM4-204ENST00000641899 EPHX3Q9H6B9 360 aa17.82■□□□□ 0.44
SRRM4-204ENST00000641899 RFXAPO00287 272 aa17.81■□□□□ 0.44
SRRM4-204ENST00000641899 IQCF3P0C7M6 154 aa17.81■□□□□ 0.44
SRRM4-204ENST00000641899 TAP1Q03518 808 aa17.81■□□□□ 0.44
SRRM4-204ENST00000641899 PPP2R5BQ15173 497 aa17.81■□□□□ 0.44
SRRM4-204ENST00000641899 PRR12Q9ULL5 1215 aa17.81■□□□□ 0.44
SRRM4-204ENST00000641899 ALDH5A1P51649 535 aaPredicted RBP17.8■□□□□ 0.44
SRRM4-204ENST00000641899 PDE4DQ08499 809 aa17.8■□□□□ 0.44
SRRM4-204ENST00000641899 CCDC96Q2M329 555 aa17.8■□□□□ 0.44
SRRM4-204ENST00000641899 NBPF20Q3BBV1 942 aa17.8■□□□□ 0.44
SRRM4-204ENST00000641899 MUM1L1Q5H9M0 696 aa17.8■□□□□ 0.44
SRRM4-204ENST00000641899 KCTD1Q719H9 257 aa17.8■□□□□ 0.44
SRRM4-204ENST00000641899 CAGE1Q8TC20 777 aa17.8■□□□□ 0.44
SRRM4-204ENST00000641899 SCFD2Q8WU76 684 aa17.8■□□□□ 0.44
SRRM4-204ENST00000641899 EPB41L4AQ9HCS5 686 aaPredicted RBP17.8■□□□□ 0.44
SRRM4-204ENST00000641899 NCOR1O75376 2440 aa17.8■□□□□ 0.44
SRRM4-204ENST00000641899 BDP1A6H8Y1 2624 aa17.8■□□□□ 0.44
SRRM4-204ENST00000641899 GREB1LQ9C091 1923 aaPredicted RBP17.79■□□□□ 0.44
SRRM4-204ENST00000641899 PTPDC1A2A3K4 754 aa17.79■□□□□ 0.44
SRRM4-204ENST00000641899 PPARAQ07869 468 aa17.79■□□□□ 0.44
SRRM4-204ENST00000641899 GRB10Q13322 594 aa17.79■□□□□ 0.44
SRRM4-204ENST00000641899 BAATQ14032 418 aaPredicted RBP17.79■□□□□ 0.44
SRRM4-204ENST00000641899 DCAF4Q8WV16 495 aa17.79■□□□□ 0.44
SRRM4-204ENST00000641899 CRBNQ96SW2 442 aa17.79■□□□□ 0.44
SRRM4-204ENST00000641899 CHD9Q3L8U1 2897 aa17.79■□□□□ 0.44
SRRM4-204ENST00000641899 RBM47A0AV96 593 aaKnown RBP17.78■□□□□ 0.44
SRRM4-204ENST00000641899 EFCAB14O75071 495 aa17.78■□□□□ 0.44
SRRM4-204ENST00000641899 AFAP1L1Q8TED9 768 aa17.78■□□□□ 0.44
SRRM4-204ENST00000641899 DNERQ8NFT8 737 aa17.77■□□□□ 0.44
SRRM4-204ENST00000641899 CHMP4CQ96CF2 233 aa17.77■□□□□ 0.44
SRRM4-204ENST00000641899 VWCEQ96DN2 955 aa17.77■□□□□ 0.44
SRRM4-204ENST00000641899 RANBP17Q9H2T7 1088 aaKnown RBP17.77■□□□□ 0.44
SRRM4-204ENST00000641899 MYO9BQ13459 2157 aa17.77■□□□□ 0.43
SRRM4-204ENST00000641899 XIRP2A4UGR9 3374 aa17.77■□□□□ 0.43
SRRM4-204ENST00000641899 A6NJR5 290 aa17.76■□□□□ 0.43
SRRM4-204ENST00000641899 PTGS1P23219 599 aa17.76■□□□□ 0.43
SRRM4-204ENST00000641899 CALML3P27482 149 aa17.76■□□□□ 0.43
SRRM4-204ENST00000641899 SNAP25P60880 206 aa17.76■□□□□ 0.43
SRRM4-204ENST00000641899 PTGISQ16647 500 aa17.76■□□□□ 0.43
SRRM4-204ENST00000641899 RNF207Q6ZRF8 634 aa17.76■□□□□ 0.43
SRRM4-204ENST00000641899 MTMR7Q9Y216 660 aa17.76■□□□□ 0.43
SRRM4-204ENST00000641899 EPOPA6NHQ4 379 aa17.75■□□□□ 0.43
SRRM4-204ENST00000641899 PI4K2BG5E9Z4 385 aa17.75■□□□□ 0.43
SRRM4-204ENST00000641899 M0R2C6 588 aa17.75■□□□□ 0.43
SRRM4-204ENST00000641899 SMARCA5O60264 1052 aaPredicted RBP17.75■□□□□ 0.43
SRRM4-204ENST00000641899 RANBP6O60518 1105 aaKnown RBP17.75■□□□□ 0.43
SRRM4-204ENST00000641899 TXNP10599 105 aaKnown RBP17.75■□□□□ 0.43
SRRM4-204ENST00000641899 ALADP13716 330 aa17.75■□□□□ 0.43
SRRM4-204ENST00000641899 CHMP4BP1P59074 171 aa17.75■□□□□ 0.43
SRRM4-204ENST00000641899 CSPP1Q1MSJ5 1256 aa17.75■□□□□ 0.43
SRRM4-204ENST00000641899 PUS10Q3MIT2 529 aaKnown RBP17.75■□□□□ 0.43
SRRM4-204ENST00000641899 SYDE2Q5VT97 1194 aa17.75■□□□□ 0.43
SRRM4-204ENST00000641899 KRT40Q6A162 431 aa17.75■□□□□ 0.43
SRRM4-204ENST00000641899 CNKSR3Q6P9H4 555 aa17.75■□□□□ 0.43
SRRM4-204ENST00000641899 CTNNA3Q9UI47 895 aa17.75■□□□□ 0.43
SRRM4-204ENST00000641899 DDX49Q9Y6V7 483 aaKnown RBP17.75■□□□□ 0.43
SRRM4-204ENST00000641899 ABHD14A-ACY1A0A1B0GW23 586 aa17.74■□□□□ 0.43
SRRM4-204ENST00000641899 PRR33A8MZF0 331 aa17.74■□□□□ 0.43
SRRM4-204ENST00000641899 SELPP16109 830 aa17.74■□□□□ 0.43
SRRM4-204ENST00000641899 TMEM63BQ5T3F8 832 aa17.74■□□□□ 0.43
SRRM4-204ENST00000641899 TGS1Q96RS0 853 aaKnown RBP17.74■□□□□ 0.43
SRRM4-204ENST00000641899 RAD9AQ99638 391 aa17.74■□□□□ 0.43
SRRM4-204ENST00000641899 FSD1Q9BTV5 496 aa17.74■□□□□ 0.43
SRRM4-204ENST00000641899 NFIBO00712 420 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms