RNA–Protein interactions for RNA: ENST00000641715.1

SAMMSON-221, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-221ENST00000641715 TAPT1Q6NXT6 567 aa13.71□□□□□ -0.21
SAMMSON-221ENST00000641715 CATIPQ7Z7H3 387 aa13.71□□□□□ -0.21
SAMMSON-221ENST00000641715 FBXO16Q8IX29 292 aaPredicted RBP13.71□□□□□ -0.21
SAMMSON-221ENST00000641715 KLHDC9Q8NEP7 349 aa13.71□□□□□ -0.21
SAMMSON-221ENST00000641715 MTA3Q9BTC8 594 aa13.71□□□□□ -0.21
SAMMSON-221ENST00000641715 ABCB11O95342 1321 aa13.71□□□□□ -0.21
SAMMSON-221ENST00000641715 SZT2Q5T011 3432 aa13.71□□□□□ -0.22
SAMMSON-221ENST00000641715 A0A1W2PQ45 241 aaPredicted RBP13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 A0A1W2PQY0 241 aa13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 SH2B2O14492 632 aaPredicted RBP13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 ZBTB5O15062 677 aa13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 CYTH3O43739 400 aa13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 C6orf222P0C671 652 aaPredicted RBP13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 PTGS1P23219 599 aa13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 GJA9P57773 515 aa13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 SNX17Q15036 470 aa13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 KCNA10Q16322 511 aa13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 TMEM63BQ5T3F8 832 aa13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 RASEFQ8IZ41 740 aa13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 TSEN34Q9BSV6 310 aaKnown RBP13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 MYL10Q9BUA6 226 aa13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 AMNQ9BXJ7 453 aa13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 UPF3AQ9H1J1 476 aaKnown RBP13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 RIOX1Q9H6W3 641 aa13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 GNEQ9Y223 722 aaKnown RBP13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 LAMA2P24043 3122 aaKnown RBP13.7□□□□□ -0.22
SAMMSON-221ENST00000641715 LOC102724159A0A0B4J2E5 919 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 CTAGE5O15320 804 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 SMPD1P17405 629 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 CST5P28325 142 aaPredicted RBP13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 ACLYP53396 1101 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 PWP2Q15269 919 aaKnown RBP13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 RNF20Q5VTR2 975 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 C1orf53Q5VUE5 145 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 IQSEC1Q6DN90 963 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 NOL8Q76FK4 1167 aaKnown RBP13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 ZNF654Q8IZM8 581 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 DNERQ8NFT8 737 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 NUP133Q8WUM0 1156 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 TMEM87BQ96K49 555 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 PIGSQ96S52 555 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 GDF15Q99988 308 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 LRRC2Q9BYS8 371 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 VTA1Q9NP79 307 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 COL20A1Q9P218 1284 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 ATP11BQ9Y2G3 1177 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 MRPL11Q9Y3B7 192 aaKnown RBP13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 OPLAHO14841 1288 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 EDNRBP24530 442 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 LIFRP42702 1097 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 MAGEA10P43363 369 aaPredicted RBP13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 ADCK5Q3MIX3 580 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 TSGA10IPQ3SY00 556 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 TRIM60Q495X7 471 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 GNASQ5JWF2 1037 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 HOMER1Q86YM7 354 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 MCF2L2Q86YR7 1114 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 TMTC2Q8N394 836 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 SYTL5Q8TDW5 730 aaPredicted RBP13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 MAP3K14Q99558 947 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 MAF1Q9H063 256 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 SPC25Q9HBM1 224 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 PPP4R2Q9NY27 417 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 PCDHA1Q9Y5I3 950 aa13.69□□□□□ -0.22
SAMMSON-221ENST00000641715 MOXD2PA6NHM9 499 aa13.68□□□□□ -0.22
SAMMSON-221ENST00000641715 CCDC69A6NI79 296 aa13.68□□□□□ -0.22
SAMMSON-221ENST00000641715 DDAH1O94760 285 aa13.68□□□□□ -0.22
SAMMSON-221ENST00000641715 ASGR1P07306 291 aa13.68□□□□□ -0.22
SAMMSON-221ENST00000641715 NKX3-2P78367 333 aa13.68□□□□□ -0.22
SAMMSON-221ENST00000641715 BEX3Q00994 111 aa13.68□□□□□ -0.22
SAMMSON-221ENST00000641715 PDE4DQ08499 809 aa13.68□□□□□ -0.22
SAMMSON-221ENST00000641715 NFXL1Q6ZNB6 911 aa13.68□□□□□ -0.22
SAMMSON-221ENST00000641715 TLK2Q86UE8 772 aa13.68□□□□□ -0.22
SAMMSON-221ENST00000641715 PCSK9Q8NBP7 692 aaKnown RBP13.68□□□□□ -0.22
SAMMSON-221ENST00000641715 NEK1Q96PY6 1258 aa13.68□□□□□ -0.22
SAMMSON-221ENST00000641715 TAAR1Q96RJ0 339 aa13.68□□□□□ -0.22
SAMMSON-221ENST00000641715 PNMA6FA0A0J9YX94 578 aa13.67□□□□□ -0.22
SAMMSON-221ENST00000641715 RBM47A0AV96 593 aaKnown RBP13.67□□□□□ -0.22
SAMMSON-221ENST00000641715 DYNC1LI2O43237 492 aaPredicted RBP13.67□□□□□ -0.22
SAMMSON-221ENST00000641715 CFBP00751 764 aa13.67□□□□□ -0.22
SAMMSON-221ENST00000641715 RXRAP19793 462 aa13.67□□□□□ -0.22
SAMMSON-221ENST00000641715 KIF5BP33176 963 aa13.67□□□□□ -0.22
SAMMSON-221ENST00000641715 EXOSC10Q01780 885 aaKnown RBP13.67□□□□□ -0.22
SAMMSON-221ENST00000641715 TLE2Q04725 743 aa13.67□□□□□ -0.22
SAMMSON-221ENST00000641715 DUSP28Q4G0W2 176 aa13.67□□□□□ -0.22
SAMMSON-221ENST00000641715 ERICH6BQ5W0A0 696 aa13.67□□□□□ -0.22
SAMMSON-221ENST00000641715 CTCFLQ8NI51 663 aaPredicted RBP13.67□□□□□ -0.22
SAMMSON-221ENST00000641715 PIBF1Q8WXW3 757 aa13.67□□□□□ -0.22
SAMMSON-221ENST00000641715 MPHOSPH6Q99547 160 aaKnown RBP13.67□□□□□ -0.22
SAMMSON-221ENST00000641715 WDR11Q9BZH6 1224 aa13.67□□□□□ -0.22
SAMMSON-221ENST00000641715 STARD7Q9NQZ5 370 aa13.67□□□□□ -0.22
SAMMSON-221ENST00000641715 CENPBP07199 599 aaPredicted RBP13.66□□□□□ -0.22
SAMMSON-221ENST00000641715 BMP8BP34820 402 aa13.66□□□□□ -0.22
SAMMSON-221ENST00000641715 FXR1P51114 621 aaKnown RBP eCLIP13.66□□□□□ -0.22
SAMMSON-221ENST00000641715 HSD17B4P51659 736 aa13.66□□□□□ -0.22
SAMMSON-221ENST00000641715 MDM2Q00987 491 aaPredicted RBP13.66□□□□□ -0.22
SAMMSON-221ENST00000641715 GHRHRQ02643 423 aa13.66□□□□□ -0.22
SAMMSON-221ENST00000641715 SGMS1Q86VZ5 419 aa13.66□□□□□ -0.22
SAMMSON-221ENST00000641715 RAB11FIP4Q86YS3 637 aa13.66□□□□□ -0.22
SAMMSON-221ENST00000641715 NSUN6Q8TEA1 469 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms