RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 USP14P54578 494 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 CETN1Q12798 172 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 NR1H3Q13133 447 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 SYCP2LQ5T4T6 812 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 KRT40Q6A162 431 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 VSTM4Q8IW00 320 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 ATP11CQ8NB49 1132 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 PPP1R14CQ8TAE6 165 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 XAGE2Q96GT9 111 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 CLMNQ96JQ2 1002 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 NOD2Q9HC29 1040 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 SH3BP1Q9Y3L3 701 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 PLA2R1Q13018 1463 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 hCG_1642624A0A1W2PR95 340 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 PRDM1O75626 825 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 A1BGP04217 495 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 HOXB7P09629 217 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 STRN3Q13033 797 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 DRAXINQ8NBI3 349 aaPredicted RBP9.01□□□□□ -0.97
NECAP1-227ENST00000640648 ZNF496Q96IT1 587 aaPredicted RBP9.01□□□□□ -0.97
NECAP1-227ENST00000640648 CARD8Q9Y2G2 431 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 DIAPH2O60879 1101 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 GAS8O95995 478 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 TSPY3P0CV98 308 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 TSPY8P0CW00 308 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 PNOCQ13519 176 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 AGBL2Q5U5Z8 902 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 CWF19L1Q69YN2 538 aaKnown RBP9.01□□□□□ -0.97
NECAP1-227ENST00000640648 OLFML1Q6UWY5 402 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 ZNF473Q8WTR7 871 aaKnown RBP9.01□□□□□ -0.97
NECAP1-227ENST00000640648 NLRP7Q8WX94 980 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 ATP6V1G3Q96LB4 118 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 KCNJ14Q9UNX9 436 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 CTNND2Q9UQB3 1225 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 SYCE1LA8MT33 242 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 C6orf229H3BNL8 230 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 LARGE1O95461 756 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 PAX7P23759 505 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 DDIT3P35638 169 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 ADKP55263 362 aaKnown RBP9.01□□□□□ -0.97
NECAP1-227ENST00000640648 PPARDQ03181 441 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 NSMCE1Q8WV22 266 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 DCAF5Q96JK2 942 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 FAM96AQ9H5X1 160 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 TRPM2O94759 1503 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 SYNMO15061 1565 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 PBRM1Q86U86 1689 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 CBFA2T3O75081 653 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 TBC1D8O95759 1140 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 MYBL2P10244 700 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 MDH1P40925 334 aaKnown RBP9.01□□□□□ -0.97
NECAP1-227ENST00000640648 ATP1A2P50993 1020 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 NAPAP54920 295 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 PRR16Q569H4 304 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 ANKRD35Q8N283 1001 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 TNIP2Q8NFZ5 429 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 SNX29Q8TEQ0 813 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 APPBP2Q92624 585 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 CHMP6Q96FZ7 201 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 FUT8Q9BYC5 575 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 OSBPL3Q9H4L5 887 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 MAGEB6P1A0A0J9YX57 407 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 ZNF189O75820 626 aaPredicted RBP9.01□□□□□ -0.97
NECAP1-227ENST00000640648 MAN1A1P33908 653 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 STX3Q13277 289 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 RASGRF1Q13972 1273 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 IRGCQ6NXR0 463 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 GSDMBQ8TAX9 411 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 ENOX1Q8TC92 643 aaKnown RBP9.01□□□□□ -0.97
NECAP1-227ENST00000640648 ZFAND2BQ8WV99 257 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 DNAJC9Q8WXX5 260 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 CFAP36Q96G28 342 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 FTOQ9C0B1 505 aaKnown RBP eCLIP9.01□□□□□ -0.97
NECAP1-227ENST00000640648 ARMT1Q9H993 441 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.01□□□□□ -0.97
NECAP1-227ENST00000640648 INTUQ9ULD6 942 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 COMMD3-BMI1R4GMX3 469 aa9.01□□□□□ -0.97
NECAP1-227ENST00000640648 IPO5O00410 1097 aaKnown RBP9□□□□□ -0.97
NECAP1-227ENST00000640648 RTN3O95197 1032 aaPredicted RBP9□□□□□ -0.97
NECAP1-227ENST00000640648 KRT6AP02538 564 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 KRT6BP04259 564 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 PLCB3Q01970 1234 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 RILPL1Q5EBL4 403 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 BEND3Q5T5X7 828 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 LGSNQ5TDP6 509 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 FAM43BQ6ZT52 329 aaPredicted RBP9□□□□□ -0.97
NECAP1-227ENST00000640648 OGFOD1Q8N543 542 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 ACSBG1Q96GR2 724 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 MPP4Q96JB8 637 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 DESI2Q9BSY9 194 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 BABAM1Q9NWV8 329 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 TLR7Q9NYK1 1049 aaKnown RBP9□□□□□ -0.97
NECAP1-227ENST00000640648 SUCLA2Q9P2R7 463 aaPredicted RBP9□□□□□ -0.97
NECAP1-227ENST00000640648 STAP2Q9UGK3 403 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 C15orf41Q9Y2V0 281 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 TMED5Q9Y3A6 229 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 XPO1O14980 1071 aaKnown RBP9□□□□□ -0.97
NECAP1-227ENST00000640648 FOXP2O15409 715 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 PPIP5K2O43314 1243 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 CTNND1O60716 968 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms