RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 RBPJLQ9UBG7 517 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 NOL7Q9UMY1 257 aaKnown RBP10.03□□□□□ -0.8
HLA-B-258ENST00000640615 RABGAP1Q9Y3P9 1069 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 LOC285556D6RIA3 1793 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 FAM205CA6NFA0 338 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 IGF2BP3O00425 579 aaKnown RBP eCLIP10.02□□□□□ -0.81
HLA-B-258ENST00000640615 NFIBO00712 420 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 MEIS2O14770 477 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 OPLAHO14841 1288 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 SLC34A2O95436 690 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 GCLCP48506 637 aaPredicted RBP10.02□□□□□ -0.81
HLA-B-258ENST00000640615 KRT85P78386 507 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 CEBPZQ03701 1054 aaKnown RBP10.02□□□□□ -0.81
HLA-B-258ENST00000640615 NONOQ15233 471 aaKnown RBP eCLIP10.02□□□□□ -0.81
HLA-B-258ENST00000640615 MCTP2Q6DN12 878 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 FCHSD1Q86WN1 690 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 NCAPG2Q86XI2 1143 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 IFNL1Q8IU54 200 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 RIOX2Q8IUF8 465 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 GPRC5AQ8NFJ5 357 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 TBC1D5Q92609 795 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 PGBD1Q96JS3 809 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 TXNRD2Q9NNW7 524 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 ZCCHC17Q9NP64 241 aaKnown RBP10.02□□□□□ -0.81
HLA-B-258ENST00000640615 CFAP45Q9UL16 551 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 CNPY2Q9Y2B0 182 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 CASP8AP2Q9UKL3 1982 aa10.02□□□□□ -0.81
HLA-B-258ENST00000640615 SPDYE3A6NKU9 549 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 PIK3CDO00329 1044 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 SLC25A27O95847 323 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 FOSP01100 380 aaPredicted RBP10.01□□□□□ -0.81
HLA-B-258ENST00000640615 TM4SF4P48230 202 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 CLK2P49760 499 aaKnown RBP10.01□□□□□ -0.81
HLA-B-258ENST00000640615 ERVK-9P63128 1117 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 ERVK-24P63145 666 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 TAF1CQ15572 869 aaPredicted RBP10.01□□□□□ -0.81
HLA-B-258ENST00000640615 INF2Q27J81 1249 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 Q3C1V9 767 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 RILPL1Q5EBL4 403 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 ATL3Q6DD88 541 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 NSMFQ6X4W1 530 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 RNF207Q6ZRF8 634 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 CLEC17AQ6ZS10 378 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 ANKRD13CQ8N6S4 541 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 CHST13Q8NET6 341 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 USP28Q96RU2 1077 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 MOV10L1Q9BXT6 1211 aaKnown RBP10.01□□□□□ -0.81
HLA-B-258ENST00000640615 ANO3Q9BYT9 981 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 ACAD9Q9H845 621 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 SAGE1Q9NXZ1 904 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 CLIC4Q9Y696 253 aa10.01□□□□□ -0.81
HLA-B-258ENST00000640615 PTPRFP10586 1907 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 MYH6P13533 1939 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 GOLGA6L22H0YM25 854 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 FIBPO43427 364 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 ERCC3P19447 782 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 COPB2P35606 906 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 TRAPPC10P48553 1259 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 TOB1P50616 345 aaPredicted RBP10□□□□□ -0.81
HLA-B-258ENST00000640615 HSD17B4P51659 736 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 CCNA1P78396 465 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 AP3B2Q13367 1082 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 BAATQ14032 418 aaPredicted RBP10□□□□□ -0.81
HLA-B-258ENST00000640615 NBR1Q14596 966 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 ZNF174Q15697 407 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 TTC38Q5R3I4 469 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 WDR78Q5VTH9 848 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 ANO1Q5XXA6 986 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 TEX2Q8IWB9 1127 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 CCAR1Q8IX12 1150 aaKnown RBP10□□□□□ -0.81
HLA-B-258ENST00000640615 ANKRD35Q8N283 1001 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 SAMD3Q8N6K7 520 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 TBCKQ8TEA7 893 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 FTOQ9C0B1 505 aaKnown RBP eCLIP10□□□□□ -0.81
HLA-B-258ENST00000640615 MCOLN1Q9GZU1 580 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 GDPD2Q9HCC8 539 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 ZFYVE28Q9HCC9 887 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 MAP3K20Q9NYL2 800 aaKnown RBP10□□□□□ -0.81
HLA-B-258ENST00000640615 FBXO40Q9UH90 709 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 TSKSQ9UJT2 592 aa10□□□□□ -0.81
HLA-B-258ENST00000640615 RPS6P62753 249 aaKnown RBP9.99□□□□□ -0.81
HLA-B-258ENST00000640615 MLLT1Q03111 559 aaPredicted RBP9.99□□□□□ -0.81
HLA-B-258ENST00000640615 STK38Q15208 465 aa9.99□□□□□ -0.81
HLA-B-258ENST00000640615 SF3A1Q15459 793 aaKnown RBP9.99□□□□□ -0.81
HLA-B-258ENST00000640615 CSPP1Q1MSJ5 1256 aa9.99□□□□□ -0.81
HLA-B-258ENST00000640615 LETM2Q2VYF4 491 aa9.99□□□□□ -0.81
HLA-B-258ENST00000640615 SLC30A10Q6XR72 485 aa9.99□□□□□ -0.81
HLA-B-258ENST00000640615 NEK8Q86SG6 692 aa9.99□□□□□ -0.81
HLA-B-258ENST00000640615 REM2Q8IYK8 340 aaPredicted RBP9.99□□□□□ -0.81
HLA-B-258ENST00000640615 SYTL5Q8TDW5 730 aaPredicted RBP9.99□□□□□ -0.81
HLA-B-258ENST00000640615 SPATA32Q96LK8 384 aa9.99□□□□□ -0.81
HLA-B-258ENST00000640615 SCAND2PQ9GZW5 306 aaPredicted RBP9.99□□□□□ -0.81
HLA-B-258ENST00000640615 MROH8Q9H579 483 aa9.99□□□□□ -0.81
HLA-B-258ENST00000640615 EHMT1Q9H9B1 1298 aa9.99□□□□□ -0.81
HLA-B-258ENST00000640615 A1CFQ9NQ94 594 aaKnown RBP9.99□□□□□ -0.81
HLA-B-258ENST00000640615 RTEL1Q9NZ71 1219 aa9.99□□□□□ -0.81
HLA-B-258ENST00000640615 MORF4L1Q9UBU8 362 aa9.99□□□□□ -0.81
HLA-B-258ENST00000640615 CPA4Q9UI42 421 aa9.99□□□□□ -0.81
HLA-B-258ENST00000640615 PCDHB6Q9Y5E3 794 aa9.99□□□□□ -0.81
HLA-B-258ENST00000640615 RLFQ13129 1914 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms