RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 GDF11O95390 407 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 ZNF18P17022 549 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 SLC16A2P36021 539 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 TECP42680 631 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 CLK2P49760 499 aaKnown RBP9.34□□□□□ -0.91
PNKP-231ENST00000640501 PSMD2Q13200 908 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 IL17AQ16552 155 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 KLHL10Q6JEL2 608 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 SH3BP5LQ7L8J4 393 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 DEFB132Q7Z7B7 95 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 PPFIBP1Q86W92 1011 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 GRAMD1CQ8IYS0 662 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 CACTINQ8WUQ7 758 aaKnown RBP9.34□□□□□ -0.91
PNKP-231ENST00000640501 DHTKD1Q96HY7 919 aaPredicted RBP9.34□□□□□ -0.91
PNKP-231ENST00000640501 C7orf25Q9BPX7 421 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 KCNF1Q9H3M0 494 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 KCND1Q9NSA2 647 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 ZBTB21Q9ULJ3 1066 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 PCDHA12Q9UN75 941 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 R3HCC1Q9Y3T6 440 aaKnown RBP9.34□□□□□ -0.91
PNKP-231ENST00000640501 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.34□□□□□ -0.91
PNKP-231ENST00000640501 FER1L6Q2WGJ9 1857 aa9.34□□□□□ -0.91
PNKP-231ENST00000640501 A0A087WWV3 80 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 A0A087X0B3 334 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 PVALEFA0A1B0GWK0 134 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 CLRN2A0PK11 232 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 PSDA5PKW4 1024 aaPredicted RBP9.33□□□□□ -0.92
PNKP-231ENST00000640501 WNT7AO00755 349 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 RHOBTB3O94955 611 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 NDUFB10O96000 172 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 PLCG1P19174 1290 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 KCNA3P22001 575 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 BMP6P22004 513 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 EEF1GP26641 437 aaKnown RBP9.33□□□□□ -0.92
PNKP-231ENST00000640501 CUL4BQ13620 913 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 DCAF15Q66K64 600 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 TTBK2Q6IQ55 1244 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 POTEDQ86YR6 584 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 CLEC10AQ8IUN9 316 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 SNX29Q8TEQ0 813 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 LARP4BQ92615 738 aaKnown RBP9.33□□□□□ -0.92
PNKP-231ENST00000640501 IQCDQ96DY2 449 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 CCDC51Q96ER9 411 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 MTMR9Q96QG7 549 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 NAA15Q9BXJ9 866 aaKnown RBP9.33□□□□□ -0.92
PNKP-231ENST00000640501 ANO3Q9BYT9 981 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 TMEM60Q9H2L4 133 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 MYOZ2Q9NPC6 264 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 TMEM260Q9NX78 707 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 NRBP1Q9UHY1 535 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 FEM1BQ9UK73 627 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 CTNND2Q9UQB3 1225 aa9.33□□□□□ -0.92
PNKP-231ENST00000640501 MRPL11Q9Y3B7 192 aaKnown RBP9.33□□□□□ -0.92
PNKP-231ENST00000640501 ABCB11O95342 1321 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 CYP3A7-CYP3A51PA0A087WV96 503 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 A0A1B0GTH6 734 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 FAM196BA6NMK8 535 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 PPP1R3GB7ZBB8 358 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 PIK3CDO00329 1044 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 ARHGAP6O43182 974 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 FDX1P10109 184 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 ATP1A3P13637 1013 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 PRKCSHP14314 528 aaPredicted RBP9.32□□□□□ -0.92
PNKP-231ENST00000640501 CYP3A7P24462 503 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 ZNF76P36508 570 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 CAP2P40123 477 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 ASIC1P78348 528 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 CXCL9Q07325 125 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 PDE4DQ08499 809 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 PTPN14Q15678 1187 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 TSR1Q2NL82 804 aaKnown RBP9.32□□□□□ -0.92
PNKP-231ENST00000640501 CCDC144BQ3MJ40 725 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 COBLL1Q53SF7 1204 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 CDKAL1Q5VV42 579 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 CNGA4Q8IV77 575 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 SAMD3Q8N6K7 520 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 GIMAP8Q8ND71 665 aaPredicted RBP9.32□□□□□ -0.92
PNKP-231ENST00000640501 NELFBQ8WX92 580 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 LPAR1Q92633 364 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 DPF2Q92785 391 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 FAM20AQ96MK3 541 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 FEZ1Q99689 392 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 TSG101Q99816 390 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 BLZF1Q9H2G9 400 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 THAP9Q9H5L6 903 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 VCPKMTQ9H867 229 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 PYCARDQ9ULZ3 195 aa9.32□□□□□ -0.92
PNKP-231ENST00000640501 ATF5Q9Y2D1 282 aaPredicted RBP9.32□□□□□ -0.92
PNKP-231ENST00000640501 CTDP1Q9Y5B0 961 aaPredicted RBP9.32□□□□□ -0.92
PNKP-231ENST00000640501 BRCA1P38398 1863 aaKnown RBP9.32□□□□□ -0.92
PNKP-231ENST00000640501 ITIH6Q6UXX5 1313 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 STX10O60499 249 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 TDP2O95551 362 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 SREBF1P36956 1147 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 USP14P54578 494 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 UBE2SQ16763 222 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 KMT5BQ4FZB7 885 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 Q4G0T1 1027 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 FOXR2Q6PJQ5 311 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 UNC13DQ70J99 1090 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms