RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 DPCR1Q3MIW9 517 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 TDRD12Q587J7 1177 aaKnown RBP6.25□□□□□ -1.41
SCARB2-218ENST00000639715 GKAP1Q5VSY0 366 aaPredicted RBP6.25□□□□□ -1.41
SCARB2-218ENST00000639715 CC2D2BQ6DHV5 1058 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 ZNF804AQ7Z570 1209 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 LZTS2Q9BRK4 669 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 NUP58Q9BVL2 599 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 GREM2Q9H772 168 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 UBAP1Q9NZ09 502 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 KCNJ14Q9UNX9 436 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 PCDHA5Q9Y5H7 936 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 BTBD18B2RXH4 712 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 LDHBP07195 334 aaKnown RBP6.25□□□□□ -1.41
SCARB2-218ENST00000639715 HIBADHP31937 336 aaKnown RBP6.25□□□□□ -1.41
SCARB2-218ENST00000639715 EXOSC10Q01780 885 aaKnown RBP6.25□□□□□ -1.41
SCARB2-218ENST00000639715 PAK1Q13153 545 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 CCDC80Q76M96 950 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 MSL3Q8N5Y2 521 aaKnown RBP6.25□□□□□ -1.41
SCARB2-218ENST00000639715 RRP36Q96EU6 259 aaKnown RBP6.25□□□□□ -1.41
SCARB2-218ENST00000639715 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.25□□□□□ -1.41
SCARB2-218ENST00000639715 RNF26Q9BY78 433 aaPredicted RBP6.25□□□□□ -1.41
SCARB2-218ENST00000639715 FTOQ9C0B1 505 aaKnown RBP eCLIP6.25□□□□□ -1.41
SCARB2-218ENST00000639715 MAF1Q9H063 256 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 IL25Q9H293 177 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 UNC45AQ9H3U1 944 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 VCPKMTQ9H867 229 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 MYO1AQ9UBC5 1043 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 CCDC160A6NGH7 325 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 STXBP3O00186 592 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 ANP32DO95626 131 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 PHKA1P46020 1223 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 GJA8P48165 433 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 IFI16Q16666 785 aaKnown RBP6.25□□□□□ -1.41
SCARB2-218ENST00000639715 C17orf50Q8WW18 174 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 IQCDQ96DY2 449 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 CCDC42Q96M95 316 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 PNKPQ96T60 521 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 NOD2Q9HC29 1040 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 POLD4Q9HCU8 107 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 FAM114A2Q9NRY5 505 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 FANCLQ9NW38 375 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 EVI5O60447 810 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 IMPDH2P12268 514 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 GBP1P32455 592 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 NT5C2P49902 561 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 KBTBD12Q3ZCT8 623 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 SPATA1Q5VX52 437 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 SPATA31A3Q5VYP0 1347 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 NLRP10Q86W26 655 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 ZSCAN29Q8IWY8 852 aaPredicted RBP6.24□□□□□ -1.41
SCARB2-218ENST00000639715 FMR1NBQ8N0W7 255 aaPredicted RBP6.24□□□□□ -1.41
SCARB2-218ENST00000639715 CRACR2BQ8N4Y2 399 aaPredicted RBP6.24□□□□□ -1.41
SCARB2-218ENST00000639715 IFT81Q8WYA0 676 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 CUL5Q93034 780 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 STAMBPL1Q96FJ0 436 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 GSDMAQ96QA5 445 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 PUS7LQ9H0K6 701 aaKnown RBP6.24□□□□□ -1.41
SCARB2-218ENST00000639715 ZNF335Q9H4Z2 1342 aaPredicted RBP6.24□□□□□ -1.41
SCARB2-218ENST00000639715 VAT1LQ9HCJ6 419 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 LRRIQ3A6PVS8 624 aaPredicted RBP6.24□□□□□ -1.41
SCARB2-218ENST00000639715 HLA-DOAP06340 250 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 RFC4P35249 363 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 TRAPPC10P48553 1259 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 RCAN1P53805 252 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 FOXO4P98177 505 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 SFSWAPQ12872 951 aaKnown RBP6.24□□□□□ -1.41
SCARB2-218ENST00000639715 TMED1Q13445 227 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 DRP2Q13474 957 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 MAP7Q14244 749 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 IQCB1Q15051 598 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 KRT79Q5XKE5 535 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 OLFML1Q6UWY5 402 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 RSRC2Q7L4I2 434 aaKnown RBP6.24□□□□□ -1.41
SCARB2-218ENST00000639715 RNF10Q8N5U6 811 aaKnown RBP6.24□□□□□ -1.41
SCARB2-218ENST00000639715 CCDC155Q8N6L0 562 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 COG1Q8WTW3 980 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 ACSBG1Q96GR2 724 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 ZSCAN10Q96SZ4 725 aaPredicted RBP6.24□□□□□ -1.41
SCARB2-218ENST00000639715 NAP1L4Q99733 375 aaKnown RBP6.24□□□□□ -1.41
SCARB2-218ENST00000639715 ISCA1Q9BUE6 129 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 PHACTR1Q9C0D0 580 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 SAMD15Q9P1V8 674 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 ZFATQ9P243 1243 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 WWC3Q9ULE0 1092 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 CDHR2Q9BYE9 1310 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 DDAH1O94760 285 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 NNTQ13423 1086 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 UBE4AQ14139 1066 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 ALX1Q15699 326 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 SEPT7Q16181 437 aaKnown RBP6.24□□□□□ -1.41
SCARB2-218ENST00000639715 CWF19L1Q69YN2 538 aaKnown RBP6.24□□□□□ -1.41
SCARB2-218ENST00000639715 PIK3AP1Q6ZUJ8 805 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 CCDC65Q8IXS2 484 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 SLC35F6Q8N357 371 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 TTLL11Q8NHH1 800 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 ERMNQ8TAM6 284 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 ENOX1Q8TC92 643 aaKnown RBP6.24□□□□□ -1.41
SCARB2-218ENST00000639715 KCNV2Q8TDN2 545 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 IFT74Q96LB3 600 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 RMDN2Q96LZ7 410 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms