RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 NDUFAB1O14561 156 aa22.46■■□□□ 1.19
CACNA1A-243ENST00000637616 USO1O60763 962 aaKnown RBP22.46■■□□□ 1.19
CACNA1A-243ENST00000637616 CCDC155Q8N6L0 562 aa22.46■■□□□ 1.19
CACNA1A-243ENST00000637616 SLIT2O94813 1529 aa22.45■■□□□ 1.18
CACNA1A-243ENST00000637616 INPP5BP32019 993 aa22.45■■□□□ 1.18
CACNA1A-243ENST00000637616 RRAGAQ7L523 313 aa22.45■■□□□ 1.18
CACNA1A-243ENST00000637616 FNBP4Q8N3X1 1017 aaPredicted RBP22.45■■□□□ 1.18
CACNA1A-243ENST00000637616 STIM2Q9P246 746 aa22.45■■□□□ 1.18
CACNA1A-243ENST00000637616 CCNE1P24864 410 aa22.45■■□□□ 1.18
CACNA1A-243ENST00000637616 GUCY2FP51841 1108 aa22.45■■□□□ 1.18
CACNA1A-243ENST00000637616 RASSF7Q02833 373 aa22.45■■□□□ 1.18
CACNA1A-243ENST00000637616 GFPT1Q06210 699 aaPredicted RBP22.45■■□□□ 1.18
CACNA1A-243ENST00000637616 TRADDQ15628 312 aa22.45■■□□□ 1.18
CACNA1A-243ENST00000637616 TXNRD1Q16881 649 aa22.45■■□□□ 1.18
CACNA1A-243ENST00000637616 HEATR3Q7Z4Q2 680 aa22.45■■□□□ 1.18
CACNA1A-243ENST00000637616 SH3GL2Q99962 352 aa22.45■■□□□ 1.18
CACNA1A-243ENST00000637616 NFU1Q9UMS0 254 aa22.45■■□□□ 1.18
CACNA1A-243ENST00000637616 PCDHA4Q9UN74 947 aa22.45■■□□□ 1.18
CACNA1A-243ENST00000637616 HSF2BPO75031 334 aa22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 HNRNPH1P31943 449 aaKnown RBP22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 CARSP49589 748 aaKnown RBP22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 MNAT1P51948 309 aa22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 GUCY1A3Q02108 690 aa22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 PCDHA6Q9UN73 950 aa22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 PCDHA8Q9Y5H6 950 aa22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 GOLGA8KD6RF30 607 aa22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 DHTKD1Q96HY7 919 aaPredicted RBP22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 MYH3P11055 1940 aa22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 BCORQ6W2J9 1755 aa22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 COL5A2P05997 1499 aaPredicted RBP22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 GLI1P08151 1106 aa22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 C8orf74Q6P047 294 aa22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 KCNV1Q6PIU1 500 aa22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 CCDC43Q96MW1 224 aaKnown RBP22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 TRIM9Q9C026 710 aa22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 SEMA6BQ9H3T3 888 aa22.44■■□□□ 1.18
CACNA1A-243ENST00000637616 PAPPAQ13219 1627 aa22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 LRRC53A6NM62 1247 aa22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 MYO1FO00160 1098 aa22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 OPA1O60313 960 aa22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 NNTQ13423 1086 aa22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 CCDC152Q4G0S7 254 aa22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 RCSD1Q6JBY9 416 aa22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 MTMR8Q96EF0 704 aa22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 CAPN7Q9Y6W3 813 aa22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 ZNF142P52746 1687 aaPredicted RBP22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 MAGEA1P43355 309 aa22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 EPHB4P54760 987 aa22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 CABP7Q86V35 215 aa22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 RETREG2Q8NC44 543 aa22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 BRIP1Q9BX63 1249 aa22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 TSGA10Q9BZW7 698 aa22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 DOCK2Q92608 1830 aa22.43■■□□□ 1.18
CACNA1A-243ENST00000637616 FAM107BQ9H098 131 aa22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 PLAGL2Q9UPG8 496 aa22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 HYOU1Q9Y4L1 999 aa22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 COL1A1P02452 1464 aaPredicted RBP22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 DUOX1Q9NRD9 1551 aa22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 GOLGA8HP0CJ92 632 aa22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 CALML3P27482 149 aa22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 LETM2Q2VYF4 491 aa22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 TLR10Q9BXR5 811 aa22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 PACSIN2Q9UNF0 486 aaPredicted RBP22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 KLRK1P26718 216 aa22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 TECP42680 631 aa22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 ENOX2Q16206 610 aaKnown RBP22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 SLC35G1Q2M3R5 365 aa22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 KIAA0895Q8NCT3 520 aa22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 RNPC3Q96LT9 517 aaKnown RBP22.42■■□□□ 1.18
CACNA1A-243ENST00000637616 GUCY2DQ02846 1103 aa22.41■■□□□ 1.18
CACNA1A-243ENST00000637616 MCTP2Q6DN12 878 aa22.41■■□□□ 1.18
CACNA1A-243ENST00000637616 EPB41L5Q9HCM4 733 aa22.41■■□□□ 1.18
CACNA1A-243ENST00000637616 DCP1AQ9NPI6 582 aaPredicted RBP22.41■■□□□ 1.18
CACNA1A-243ENST00000637616 SLC1A4P43007 532 aa22.41■■□□□ 1.18
CACNA1A-243ENST00000637616 PAFAH1B1P43034 410 aa22.41■■□□□ 1.18
CACNA1A-243ENST00000637616 SEC24CP53992 1094 aa22.41■■□□□ 1.18
CACNA1A-243ENST00000637616 DYMQ7RTS9 669 aa22.41■■□□□ 1.18
CACNA1A-243ENST00000637616 ERGIC2Q96RQ1 377 aa22.41■■□□□ 1.18
CACNA1A-243ENST00000637616 NDST4Q9H3R1 872 aa22.4■■□□□ 1.18
CACNA1A-243ENST00000637616 NLRC4Q9NPP4 1024 aa22.4■■□□□ 1.18
CACNA1A-243ENST00000637616 BICDL2A1A5D9 508 aa22.4■■□□□ 1.18
CACNA1A-243ENST00000637616 ERVV-1B6SEH8 477 aa22.4■■□□□ 1.18
CACNA1A-243ENST00000637616 USP17L8P0C7I0 530 aa22.4■■□□□ 1.18
CACNA1A-243ENST00000637616 TFAP4Q01664 338 aa22.4■■□□□ 1.18
CACNA1A-243ENST00000637616 CADPS2Q86UW7 1296 aa22.4■■□□□ 1.18
CACNA1A-243ENST00000637616 SUGP1Q8IWZ8 645 aaKnown RBP22.4■■□□□ 1.18
CACNA1A-243ENST00000637616 PROCA1Q8NCQ7 364 aaPredicted RBP22.4■■□□□ 1.18
CACNA1A-243ENST00000637616 NOC3LQ8WTT2 800 aaKnown RBP22.4■■□□□ 1.18
CACNA1A-243ENST00000637616 DYNLL2Q96FJ2 89 aa22.4■■□□□ 1.18
CACNA1A-243ENST00000637616 ALS2CR12Q96Q35 445 aa22.4■■□□□ 1.18
CACNA1A-243ENST00000637616 TOGARAM1Q9Y4F4 1720 aa22.4■■□□□ 1.18
CACNA1A-243ENST00000637616 ZNF233A6NK53 670 aa22.39■■□□□ 1.18
CACNA1A-243ENST00000637616 CCNT1O60563 726 aaKnown RBP22.39■■□□□ 1.18
CACNA1A-243ENST00000637616 FTCDO95954 541 aa22.39■■□□□ 1.18
CACNA1A-243ENST00000637616 FGRP09769 529 aa22.39■■□□□ 1.18
CACNA1A-243ENST00000637616 GBP6Q6ZN66 633 aa22.39■■□□□ 1.18
CACNA1A-243ENST00000637616 NIP7Q9Y221 180 aaKnown RBP eCLIP22.39■■□□□ 1.18
CACNA1A-243ENST00000637616 USP17L3A6NCW0 530 aa22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 USP17L4A6NCW7 530 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms