RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 PPFIBP2Q8ND30 876 aa17.44■□□□□ 0.38
CLN5-218ENST00000637397 USTQ9Y2C2 406 aa17.44■□□□□ 0.38
CLN5-218ENST00000637397 ARAP3Q8WWN8 1544 aa17.43■□□□□ 0.38
CLN5-218ENST00000637397 HARSP12081 509 aaKnown RBP17.43■□□□□ 0.38
CLN5-218ENST00000637397 ZYXQ15942 572 aaKnown RBP17.43■□□□□ 0.38
CLN5-218ENST00000637397 CEP83Q9Y592 693 aa17.43■□□□□ 0.38
CLN5-218ENST00000637397 KRT15P19012 456 aa17.43■□□□□ 0.38
CLN5-218ENST00000637397 VPS41P49754 854 aa17.43■□□□□ 0.38
CLN5-218ENST00000637397 CACNB1Q02641 598 aaPredicted RBP17.43■□□□□ 0.38
CLN5-218ENST00000637397 GSPT2Q8IYD1 628 aaKnown RBP17.43■□□□□ 0.38
CLN5-218ENST00000637397 NDST4Q9H3R1 872 aa17.43■□□□□ 0.38
CLN5-218ENST00000637397 CCNL1Q9UK58 526 aaPredicted RBP17.43■□□□□ 0.38
CLN5-218ENST00000637397 NRKQ7Z2Y5 1582 aa17.43■□□□□ 0.38
CLN5-218ENST00000637397 BACH1O14867 736 aa17.43■□□□□ 0.38
CLN5-218ENST00000637397 RBM17Q96I25 401 aaKnown RBP17.43■□□□□ 0.38
CLN5-218ENST00000637397 MYL1P05976 194 aa17.43■□□□□ 0.38
CLN5-218ENST00000637397 CLTAP09496 248 aa17.43■□□□□ 0.38
CLN5-218ENST00000637397 STX2P32856 288 aa17.43■□□□□ 0.38
CLN5-218ENST00000637397 CYP4A11Q02928 519 aa17.43■□□□□ 0.38
CLN5-218ENST00000637397 STMN2Q93045 179 aa17.43■□□□□ 0.38
CLN5-218ENST00000637397 FUCA2Q9BTY2 467 aa17.43■□□□□ 0.38
CLN5-218ENST00000637397 HOMER3Q9NSC5 361 aa17.43■□□□□ 0.38
CLN5-218ENST00000637397 STK36Q9NRP7 1315 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 NR2F2P24468 414 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 SMTNP53814 917 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 PPP1R12CQ9BZL4 782 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 HDAC6Q9UBN7 1215 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 IL6STP40189 918 aaPredicted RBP17.42■□□□□ 0.38
CLN5-218ENST00000637397 CLUL1Q15846 466 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 CEP63Q96MT8 703 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 PARP2Q9UGN5 583 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 PRCPP42785 496 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 IFNAR2P48551 515 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 RIPOR2Q9Y4F9 1068 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 WDR19Q8NEZ3 1342 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 GAS8O95995 478 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 ZNF131P52739 623 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 ARL6IP4Q66PJ3 421 aaKnown RBP17.42■□□□□ 0.38
CLN5-218ENST00000637397 NYAP1Q6ZVC0 841 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 FAM133AQ8N9E0 248 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 STAG1Q8WVM7 1258 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 FERMT1Q9BQL6 677 aa17.42■□□□□ 0.38
CLN5-218ENST00000637397 KCNJ6P48051 423 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 CHD1O14646 1710 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 IQGAP1P46940 1657 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 HLFQ16534 295 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 PPP2R5EQ16537 467 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 DPP8Q6V1X1 898 aaPredicted RBP17.41■□□□□ 0.38
CLN5-218ENST00000637397 NFU1Q9UMS0 254 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 PTPRMP28827 1452 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 NCAPD2Q15021 1401 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 CCDC160A6NGH7 325 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 LGALS16A8MUM7 142 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 CTDNEP1O95476 244 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 GTF2IP78347 998 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 FYB2Q5VWT5 728 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 ARHGEF2Q92974 986 aaKnown RBP17.41■□□□□ 0.38
CLN5-218ENST00000637397 MYCBPQ99417 103 aaPredicted RBP17.41■□□□□ 0.38
CLN5-218ENST00000637397 CDCA7Q9BWT1 371 aaPredicted RBP17.41■□□□□ 0.38
CLN5-218ENST00000637397 SLAIN2Q9P270 581 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 AGTPBP1Q9UPW5 1226 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 MYO3AQ8NEV4 1616 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 TTC26A0AVF1 554 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 GGCXP38435 758 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 HHATQ5VTY9 493 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 ATG9AQ7Z3C6 839 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 DNAI2Q9GZS0 605 aa17.41■□□□□ 0.38
CLN5-218ENST00000637397 ZBTB22O15209 634 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 USP17L8P0C7I0 530 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 GUCY1A2P33402 732 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 BTDP43251 543 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 FMR1Q06787 632 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLN5-218ENST00000637397 METTL14Q9HCE5 456 aaKnown RBP17.4■□□□□ 0.38
CLN5-218ENST00000637397 ADAMTS1Q9UHI8 967 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 ATP8A1Q9Y2Q0 1164 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 STK24Q9Y6E0 443 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 ANKARQ7Z5J8 1434 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 FDPSP14324 419 aaKnown RBP17.4■□□□□ 0.38
CLN5-218ENST00000637397 IRX5P78411 483 aaPredicted RBP17.4■□□□□ 0.38
CLN5-218ENST00000637397 FOXO4P98177 505 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 PDCLQ13371 301 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 RIC8AQ9NPQ8 531 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 EIF3CLB5ME19 914 aaKnown RBP17.4■□□□□ 0.38
CLN5-218ENST00000637397 VSNL1P62760 191 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 ENGASEQ8NFI3 743 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.4■□□□□ 0.38
CLN5-218ENST00000637397 DYNLL2Q96FJ2 89 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 EIF3CQ99613 913 aaKnown RBP17.4■□□□□ 0.38
CLN5-218ENST00000637397 COL4A3BPQ9Y5P4 624 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 NR1D1P20393 614 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 MAGEA9P43362 315 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 PABPC4Q13310 644 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLN5-218ENST00000637397 RABL6Q3YEC7 729 aaPredicted RBP17.4■□□□□ 0.38
CLN5-218ENST00000637397 LIN9Q5TKA1 542 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 TMTC3Q6ZXV5 915 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 MICAL1Q8TDZ2 1067 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 RNF14Q9UBS8 474 aa17.4■□□□□ 0.38
CLN5-218ENST00000637397 A0A0G2JLW4 131 aa17.39■□□□□ 0.37
CLN5-218ENST00000637397 CYP2C19P33261 490 aa17.39■□□□□ 0.37
CLN5-218ENST00000637397 ALS2CLQ60I27 953 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms