RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 SP2Q02086 613 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 TNFAIP2Q03169 654 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 TFF2Q03403 129 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 TTLL4Q14679 1199 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 KCTD2Q14681 263 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 ALX1Q15699 326 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 CCDC85BQ15834 202 aaPredicted RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 USH1GQ495M9 461 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 GNASQ5JWF2 1037 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 RASIP1Q5U651 963 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 NSMFQ6X4W1 530 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 STOX1Q6ZVD7 989 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 DHX30Q7L2E3 1194 aaKnown RBP eCLIP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 ANKRD33Q7Z3H0 272 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 RAB11FIP4Q86YS3 637 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 PHF6Q8IWS0 365 aaKnown RBP eCLIP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 FAM126BQ8IXS8 530 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 SMC5Q8IY18 1101 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 TRMT44Q8IYL2 757 aaKnown RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZNF444Q8N0Y2 327 aaPredicted RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 ABRAQ8N0Z2 381 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 STAG2Q8N3U4 1231 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 MB21D1Q8N884 522 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 PRPF38AQ8NAV1 312 aaKnown RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLC43A3Q8NBI5 491 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 ARRDC4Q8NCT1 418 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 GMCL1P1Q8NEA9 526 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 MAFAQ8NHW3 353 aaPredicted RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 IL31RAQ8NI17 732 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 GTF3C2Q8WUA4 911 aaPredicted RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 STAG1Q8WVM7 1258 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 PPM1EQ8WY54 764 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 DHX38Q92620 1227 aaKnown RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 ANKS1AQ92625 1134 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 DDX11Q96FC9 970 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 TRERF1Q96PN7 1200 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 TAAR1Q96RJ0 339 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 LBHD1Q9BQE6 289 aaPredicted RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 NOC4LQ9BVI4 516 aaKnown RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 TEX13BQ9BXU2 312 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 PBX4Q9BYU1 374 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 DDX24Q9GZR7 859 aaKnown RBP eCLIP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 NAPBQ9H115 298 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 RANBP17Q9H2T7 1088 aaKnown RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 NKX2-4Q9H2Z4 354 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 PRDM12Q9H4Q4 367 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 CERS4Q9HA82 394 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 VAT1LQ9HCJ6 419 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 GOPCQ9HD26 462 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 TRMT13Q9NUP7 481 aaKnown RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 TMEM39AQ9NV64 488 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 CYP39A1Q9NYL5 469 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 ARPP21Q9UBL0 812 aaPredicted RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 ANAPC4Q9UJX5 808 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 FEM1BQ9UK73 627 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 ISY1Q9ULR0 285 aaKnown RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 STXBP5LQ9Y2K9 1186 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 DIS3Q9Y2L1 958 aaKnown RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 FRYLO94915 3013 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 ADAMTS9Q9P2N4 1935 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 SPTBN4Q9H254 2564 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 MUC3AQ02505 3323 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 TTC41PQ6P2S7 1318 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 SYNGAP1Q96PV0 1343 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 PTPRDP23468 1912 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 HELZP42694 1942 aaKnown RBP1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 hCG_1642624A0A1W2PR95 340 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 RBM47A0AV96 593 aaKnown RBP1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 PTPDC1A2A3K4 754 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 TSPY2A6NKD2 308 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 TRIM6-TRIM34B2RNG4 842 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 CYTH3O43739 400 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 ORC4O43929 436 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 MSCO60682 206 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 LPXNO60711 386 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 IGSF3O75054 1194 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 ZBED4O75132 1171 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 KDM4AO75164 1064 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 ICAM1P05362 532 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 ZFYP08048 801 aaPredicted RBP1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 MYL3P08590 195 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 TSPY3P0CV98 308 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 TSPY8P0CW00 308 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 SNHG28P0DPA3 235 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 ARP10275 920 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 PDHBP11177 359 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 MS4A1P11836 297 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 AKR1A1P14550 325 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 RAG1P15918 1043 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 SDSP20132 328 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 CALML3P27482 149 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 CST5P28325 142 aaPredicted RBP1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 KCNQ1P51787 676 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 STAT2P52630 851 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 ANTXR2P58335 489 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 CHMP4BP1P59074 171 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 RPS6P62753 249 aaKnown RBP1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 NKX3-2P78367 333 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 DEFB103AP81534 67 aa1.9□□□□□ -2.11
SYNGAP1-216ENST00000636640 SMAD3P84022 425 aaKnown RBP1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms