RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 MATN3O15232 486 aa6.2□□□□□ -1.42
CLN5-212ENST00000636602 IBSPP21815 317 aaPredicted RBP6.2□□□□□ -1.42
CLN5-212ENST00000636602 POLR2BP30876 1174 aaKnown RBP6.2□□□□□ -1.42
CLN5-212ENST00000636602 KCNC1P48547 511 aa6.2□□□□□ -1.42
CLN5-212ENST00000636602 SLC7A5Q01650 507 aa6.2□□□□□ -1.42
CLN5-212ENST00000636602 GNPTABQ3T906 1256 aa6.2□□□□□ -1.42
CLN5-212ENST00000636602 OLFML2BQ68BL8 750 aa6.2□□□□□ -1.42
CLN5-212ENST00000636602 MCATQ8IVS2 390 aaKnown RBP6.2□□□□□ -1.42
CLN5-212ENST00000636602 PHACTR4Q8IZ21 702 aa6.2□□□□□ -1.42
CLN5-212ENST00000636602 VWCEQ96DN2 955 aa6.2□□□□□ -1.42
CLN5-212ENST00000636602 TMEM260Q9NX78 707 aa6.2□□□□□ -1.42
CLN5-212ENST00000636602 ABLIM1O14639 778 aa6.19□□□□□ -1.42
CLN5-212ENST00000636602 PPP1R12AO14974 1030 aaPredicted RBP6.19□□□□□ -1.42
CLN5-212ENST00000636602 NRDCO43847 1150 aa6.19□□□□□ -1.42
CLN5-212ENST00000636602 DNAJC6O75061 913 aa6.19□□□□□ -1.42
CLN5-212ENST00000636602 USP2O75604 605 aaPredicted RBP6.19□□□□□ -1.42
CLN5-212ENST00000636602 FSHBP01225 129 aa6.19□□□□□ -1.42
CLN5-212ENST00000636602 SDHBP21912 280 aa6.19□□□□□ -1.42
CLN5-212ENST00000636602 C16orf86Q6ZW13 317 aa6.19□□□□□ -1.42
CLN5-212ENST00000636602 LDHDQ86WU2 507 aa6.19□□□□□ -1.42
CLN5-212ENST00000636602 SLFN12Q8IYM2 578 aa6.19□□□□□ -1.42
CLN5-212ENST00000636602 ZCRB1Q8TBF4 217 aaKnown RBP6.19□□□□□ -1.42
CLN5-212ENST00000636602 ZNF669Q96BR6 464 aaPredicted RBP6.19□□□□□ -1.42
CLN5-212ENST00000636602 SORCS2Q96PQ0 1159 aa6.19□□□□□ -1.42
CLN5-212ENST00000636602 IFT57Q9NWB7 429 aa6.19□□□□□ -1.42
CLN5-212ENST00000636602 ZNF214Q9UL59 606 aaPredicted RBP6.19□□□□□ -1.42
CLN5-212ENST00000636602 PTCH2Q9Y6C5 1203 aa6.19□□□□□ -1.42
CLN5-212ENST00000636602 FFAR3O14843 346 aa6.18□□□□□ -1.42
CLN5-212ENST00000636602 SUSD5O60279 629 aa6.18□□□□□ -1.42
CLN5-212ENST00000636602 LRRN2O75325 713 aa6.18□□□□□ -1.42
CLN5-212ENST00000636602 SLURP1P55000 103 aa6.18□□□□□ -1.42
CLN5-212ENST00000636602 IGBP1P78318 339 aa6.18□□□□□ -1.42
CLN5-212ENST00000636602 ADAM17P78536 824 aa6.18□□□□□ -1.42
CLN5-212ENST00000636602 BBS9Q3SYG4 887 aa6.18□□□□□ -1.42
CLN5-212ENST00000636602 TAF7LQ5H9L4 462 aa6.18□□□□□ -1.42
CLN5-212ENST00000636602 UBXN11Q5T124 520 aa6.18□□□□□ -1.42
CLN5-212ENST00000636602 KLHL6Q8WZ60 621 aa6.18□□□□□ -1.42
CLN5-212ENST00000636602 DHRS1Q96LJ7 313 aa6.18□□□□□ -1.42
CLN5-212ENST00000636602 SLC6A18Q96N87 628 aa6.18□□□□□ -1.42
CLN5-212ENST00000636602 KIF2CQ99661 725 aa6.18□□□□□ -1.42
CLN5-212ENST00000636602 SPC25Q9HBM1 224 aa6.18□□□□□ -1.42
CLN5-212ENST00000636602 FAM86C1Q9NVL1 165 aa6.18□□□□□ -1.42
CLN5-212ENST00000636602 IQCA1LA6NCM1 817 aa6.17□□□□□ -1.42
CLN5-212ENST00000636602 PNLIPP16233 465 aa6.17□□□□□ -1.42
CLN5-212ENST00000636602 GBP1P32455 592 aa6.17□□□□□ -1.42
CLN5-212ENST00000636602 CCNFP41002 786 aa6.17□□□□□ -1.42
CLN5-212ENST00000636602 GYS2P54840 703 aa6.17□□□□□ -1.42
CLN5-212ENST00000636602 ANAPC15P60006 121 aa6.17□□□□□ -1.42
CLN5-212ENST00000636602 SLC14A2Q15849 920 aa6.17□□□□□ -1.42
CLN5-212ENST00000636602 SLC10A6Q3KNW5 377 aa6.17□□□□□ -1.42
CLN5-212ENST00000636602 KIAA0907Q7Z7F0 614 aaPredicted RBP6.17□□□□□ -1.42
CLN5-212ENST00000636602 JMYQ8N9B5 988 aa6.17□□□□□ -1.42
CLN5-212ENST00000636602 FEZ1Q99689 392 aa6.17□□□□□ -1.42
CLN5-212ENST00000636602 SPATA9Q9BWV2 254 aa6.17□□□□□ -1.42
CLN5-212ENST00000636602 EPN3Q9H201 632 aa6.17□□□□□ -1.42
CLN5-212ENST00000636602 PRKAB1Q9Y478 270 aa6.17□□□□□ -1.42
CLN5-212ENST00000636602 COL4A3BPQ9Y5P4 624 aa6.17□□□□□ -1.42
CLN5-212ENST00000636602 RGS13O14921 159 aa6.16□□□□□ -1.42
CLN5-212ENST00000636602 TP53P04637 393 aaPredicted RBP6.16□□□□□ -1.42
CLN5-212ENST00000636602 KIR2DL1P43626 348 aaPredicted RBP6.16□□□□□ -1.42
CLN5-212ENST00000636602 KIR2DL2P43627 348 aaPredicted RBP6.16□□□□□ -1.42
CLN5-212ENST00000636602 PMS1P54277 932 aaKnown RBP6.16□□□□□ -1.42
CLN5-212ENST00000636602 ERVFRD-1P60508 538 aa6.16□□□□□ -1.42
CLN5-212ENST00000636602 CAP1Q01518 475 aa6.16□□□□□ -1.42
CLN5-212ENST00000636602 TKFCQ3LXA3 575 aa6.16□□□□□ -1.42
CLN5-212ENST00000636602 TDRD10Q5VZ19 366 aaKnown RBP6.16□□□□□ -1.42
CLN5-212ENST00000636602 TMEM192Q8IY95 271 aa6.16□□□□□ -1.42
CLN5-212ENST00000636602 LRRC47Q8N1G4 583 aaKnown RBP6.16□□□□□ -1.42
CLN5-212ENST00000636602 ZSWIM2Q8NEG5 633 aa6.16□□□□□ -1.42
CLN5-212ENST00000636602 CCDC74BQ96LY2 380 aa6.16□□□□□ -1.42
CLN5-212ENST00000636602 KLHL14Q9P2G3 628 aa6.16□□□□□ -1.42
CLN5-212ENST00000636602 NOP58Q9Y2X3 529 aaKnown RBP6.16□□□□□ -1.42
CLN5-212ENST00000636602 PCDHA5Q9Y5H7 936 aa6.16□□□□□ -1.42
CLN5-212ENST00000636602 SHISA3A0PJX4 238 aa6.15□□□□□ -1.42
CLN5-212ENST00000636602 AGRPO00253 132 aa6.15□□□□□ -1.42
CLN5-212ENST00000636602 CLEC3AO75596 197 aa6.15□□□□□ -1.42
CLN5-212ENST00000636602 UBOX5O94941 541 aa6.15□□□□□ -1.42
CLN5-212ENST00000636602 ASMTLO95671 621 aa6.15□□□□□ -1.42
CLN5-212ENST00000636602 FAM153BP0C7A2 387 aa6.15□□□□□ -1.42
CLN5-212ENST00000636602 HMGA2P52926 109 aa6.15□□□□□ -1.42
CLN5-212ENST00000636602 TCEA2Q15560 299 aa6.15□□□□□ -1.42
CLN5-212ENST00000636602 SV2CQ496J9 727 aa6.15□□□□□ -1.42
CLN5-212ENST00000636602 CEP128Q6ZU80 1094 aa6.15□□□□□ -1.42
CLN5-212ENST00000636602 FERMT3Q86UX7 667 aa6.15□□□□□ -1.42
CLN5-212ENST00000636602 RNF141Q8WVD5 230 aa6.15□□□□□ -1.42
CLN5-212ENST00000636602 SUCOQ9UBS9 1254 aaKnown RBP6.15□□□□□ -1.42
CLN5-212ENST00000636602 BUB1BO60566 1050 aaPredicted RBP6.14□□□□□ -1.43
CLN5-212ENST00000636602 NAT2P11245 290 aa6.14□□□□□ -1.43
CLN5-212ENST00000636602 RPL10P27635 214 aaKnown RBP6.14□□□□□ -1.43
CLN5-212ENST00000636602 TMC6Q7Z403 805 aa6.14□□□□□ -1.43
CLN5-212ENST00000636602 PPFIBP1Q86W92 1011 aa6.14□□□□□ -1.43
CLN5-212ENST00000636602 SYNPOQ8N3V7 929 aa6.14□□□□□ -1.43
CLN5-212ENST00000636602 ZBTB38Q8NAP3 1195 aaPredicted RBP6.14□□□□□ -1.43
CLN5-212ENST00000636602 CYB5D2Q8WUJ1 264 aa6.14□□□□□ -1.43
CLN5-212ENST00000636602 MAP6Q96JE9 813 aa6.14□□□□□ -1.43
CLN5-212ENST00000636602 MENTQ9BUN1 341 aa6.14□□□□□ -1.43
CLN5-212ENST00000636602 BRINP2Q9C0B6 783 aa6.14□□□□□ -1.43
CLN5-212ENST00000636602 TMX1Q9H3N1 280 aa6.14□□□□□ -1.43
CLN5-212ENST00000636602 PCDH12Q9NPG4 1184 aa6.14□□□□□ -1.43
CLN5-212ENST00000636602 ADCY3O60266 1144 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms