RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 PORCNQ9H237 461 aa16.56■□□□□ 0.24
LINC00339-208ENST00000634934 EFCC1Q9HA90 598 aa16.56■□□□□ 0.24
LINC00339-208ENST00000634934 PRDM10Q9NQV6 1147 aa16.56■□□□□ 0.24
LINC00339-208ENST00000634934 ESYT2A0FGR8 921 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 CFBP00751 764 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 MRPL12P52815 198 aaKnown RBP16.55■□□□□ 0.24
LINC00339-208ENST00000634934 MCTP1Q6DN14 999 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 FAM177A1Q8N128 213 aaPredicted RBP16.55■□□□□ 0.24
LINC00339-208ENST00000634934 MROH8Q9H579 483 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 BRMS1Q9HCU9 246 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 RIC8AQ9NPQ8 531 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 FBXO40Q9UH90 709 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 PCDHA4Q9UN74 947 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 OPLAHO14841 1288 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 FKTNO75072 461 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 HOXA13P31271 388 aaPredicted RBP16.55■□□□□ 0.24
LINC00339-208ENST00000634934 GNL2Q13823 731 aaKnown RBP16.55■□□□□ 0.24
LINC00339-208ENST00000634934 UBE2SQ16763 222 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 FOXD4L5Q5VV16 416 aaPredicted RBP16.55■□□□□ 0.24
LINC00339-208ENST00000634934 GALNT17Q6IS24 598 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 USP17L6PQ6QN14 398 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 DIS3L2Q8IYB7 885 aaKnown RBP16.55■□□□□ 0.24
LINC00339-208ENST00000634934 SHCBP1Q8NEM2 672 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 BICD2Q8TD16 824 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 FOXD4L4Q8WXT5 416 aaPredicted RBP16.55■□□□□ 0.24
LINC00339-208ENST00000634934 TBC1D5Q92609 795 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 ARHGAP39Q9C0H5 1083 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 GLT8D2Q9H1C3 349 aa16.55■□□□□ 0.24
LINC00339-208ENST00000634934 GCOM1H8Y6P7 765 aaPredicted RBP16.54■□□□□ 0.24
LINC00339-208ENST00000634934 POLR2MP0CAP2 368 aa16.54■□□□□ 0.24
LINC00339-208ENST00000634934 KRT2P35908 639 aa16.54■□□□□ 0.24
LINC00339-208ENST00000634934 SP3Q02447 781 aa16.54■□□□□ 0.24
LINC00339-208ENST00000634934 NOM1Q5C9Z4 860 aaKnown RBP16.54■□□□□ 0.24
LINC00339-208ENST00000634934 BLIDQ8IZY5 108 aa16.54■□□□□ 0.24
LINC00339-208ENST00000634934 ANKRD35Q8N283 1001 aa16.54■□□□□ 0.24
LINC00339-208ENST00000634934 CD99L2Q8TCZ2 262 aa16.54■□□□□ 0.24
LINC00339-208ENST00000634934 OXER1Q8TDS5 423 aa16.54■□□□□ 0.24
LINC00339-208ENST00000634934 BIN2Q9UBW5 565 aaPredicted RBP16.54■□□□□ 0.24
LINC00339-208ENST00000634934 MTMR6Q9Y217 621 aa16.54■□□□□ 0.24
LINC00339-208ENST00000634934 SMCHD1A6NHR9 2005 aa16.53■□□□□ 0.24
LINC00339-208ENST00000634934 BTBD18B2RXH4 712 aa16.53■□□□□ 0.24
LINC00339-208ENST00000634934 ADAMTS3O15072 1205 aa16.53■□□□□ 0.24
LINC00339-208ENST00000634934 CTGFP29279 349 aa16.53■□□□□ 0.24
LINC00339-208ENST00000634934 MAPK4P31152 587 aa16.53■□□□□ 0.24
LINC00339-208ENST00000634934 PKP1Q13835 747 aa16.53■□□□□ 0.24
LINC00339-208ENST00000634934 NPY5RQ15761 445 aa16.53■□□□□ 0.24
LINC00339-208ENST00000634934 KLHL40Q2TBA0 621 aa16.53■□□□□ 0.24
LINC00339-208ENST00000634934 JAKMIP3Q5VZ66 844 aa16.53■□□□□ 0.24
LINC00339-208ENST00000634934 RNF207Q6ZRF8 634 aa16.53■□□□□ 0.24
LINC00339-208ENST00000634934 REXO1Q8N1G1 1221 aaKnown RBP16.53■□□□□ 0.24
LINC00339-208ENST00000634934 DAGLBQ8NCG7 672 aa16.53■□□□□ 0.24
LINC00339-208ENST00000634934 RASGRP4Q8TDF6 673 aa16.53■□□□□ 0.24
LINC00339-208ENST00000634934 HTTP42858 3142 aa16.53■□□□□ 0.24
LINC00339-208ENST00000634934 CENPFP49454 3210 aa16.52■□□□□ 0.24
LINC00339-208ENST00000634934 MGAMO43451 1857 aa16.52■□□□□ 0.24
LINC00339-208ENST00000634934 MEIS2O14770 477 aa16.52■□□□□ 0.24
LINC00339-208ENST00000634934 PDIA4P13667 645 aaKnown RBP16.52■□□□□ 0.24
LINC00339-208ENST00000634934 NR5A1Q13285 461 aa16.52■□□□□ 0.24
LINC00339-208ENST00000634934 BAATQ14032 418 aaPredicted RBP16.52■□□□□ 0.24
LINC00339-208ENST00000634934 KCTD2Q14681 263 aa16.52■□□□□ 0.24
LINC00339-208ENST00000634934 SLC30A10Q6XR72 485 aa16.52■□□□□ 0.24
LINC00339-208ENST00000634934 FERMT3Q86UX7 667 aa16.52■□□□□ 0.24
LINC00339-208ENST00000634934 FCHSD1Q86WN1 690 aa16.52■□□□□ 0.24
LINC00339-208ENST00000634934 RGS22Q8NE09 1264 aa16.52■□□□□ 0.24
LINC00339-208ENST00000634934 MMP19Q99542 508 aa16.52■□□□□ 0.24
LINC00339-208ENST00000634934 A1CFQ9NQ94 594 aaKnown RBP16.52■□□□□ 0.24
LINC00339-208ENST00000634934 TMEM260Q9NX78 707 aa16.52■□□□□ 0.24
LINC00339-208ENST00000634934 IVNS1ABPQ9Y6Y0 642 aa16.52■□□□□ 0.24
LINC00339-208ENST00000634934 FCER1AP12319 257 aa16.51■□□□□ 0.23
LINC00339-208ENST00000634934 HSD17B4P51659 736 aa16.51■□□□□ 0.23
LINC00339-208ENST00000634934 RPS6P62753 249 aaKnown RBP16.51■□□□□ 0.23
LINC00339-208ENST00000634934 LACTBP83111 547 aaPredicted RBP16.51■□□□□ 0.23
LINC00339-208ENST00000634934 GPR142Q7Z601 462 aa16.51■□□□□ 0.23
LINC00339-208ENST00000634934 PLEKHH3Q7Z736 793 aa16.51■□□□□ 0.23
LINC00339-208ENST00000634934 GRPEL1Q9HAV7 217 aa16.51■□□□□ 0.23
LINC00339-208ENST00000634934 CYP39A1Q9NYL5 469 aa16.51■□□□□ 0.23
LINC00339-208ENST00000634934 PCDHA6Q9UN73 950 aa16.51■□□□□ 0.23
LINC00339-208ENST00000634934 PCDHA8Q9Y5H6 950 aa16.51■□□□□ 0.23
LINC00339-208ENST00000634934 SPDYE3A6NKU9 549 aa16.5■□□□□ 0.23
LINC00339-208ENST00000634934 KIF28PB7ZC32 967 aa16.5■□□□□ 0.23
LINC00339-208ENST00000634934 PIK3CDO00329 1044 aa16.5■□□□□ 0.23
LINC00339-208ENST00000634934 ZSCAN22P10073 491 aaPredicted RBP16.5■□□□□ 0.23
LINC00339-208ENST00000634934 SYTL5Q8TDW5 730 aaPredicted RBP16.5■□□□□ 0.23
LINC00339-208ENST00000634934 PGBD1Q96JS3 809 aa16.5■□□□□ 0.23
LINC00339-208ENST00000634934 FOXP1Q9H334 677 aaPredicted RBP16.5■□□□□ 0.23
LINC00339-208ENST00000634934 PFASO15067 1338 aa16.5■□□□□ 0.23
LINC00339-208ENST00000634934 CCDC194A0A1B0GVG4 234 aa16.5■□□□□ 0.23
LINC00339-208ENST00000634934 CLK2P49760 499 aaKnown RBP16.5■□□□□ 0.23
LINC00339-208ENST00000634934 PIK3AP1Q6ZUJ8 805 aa16.5■□□□□ 0.23
LINC00339-208ENST00000634934 SAMD3Q8N6K7 520 aa16.5■□□□□ 0.23
LINC00339-208ENST00000634934 ERO1AQ96HE7 468 aa16.5■□□□□ 0.23
LINC00339-208ENST00000634934 MAP3K20Q9NYL2 800 aaKnown RBP16.5■□□□□ 0.23
LINC00339-208ENST00000634934 POTEB2H3BUK9 544 aa16.49■□□□□ 0.23
LINC00339-208ENST00000634934 M0R2N6 131 aa16.49■□□□□ 0.23
LINC00339-208ENST00000634934 TNPO2O14787 897 aaKnown RBP16.49■□□□□ 0.23
LINC00339-208ENST00000634934 STRNO43815 780 aa16.49■□□□□ 0.23
LINC00339-208ENST00000634934 BRD1O95696 1058 aa16.49■□□□□ 0.23
LINC00339-208ENST00000634934 FOSP01100 380 aaPredicted RBP16.49■□□□□ 0.23
LINC00339-208ENST00000634934 PGK2P07205 417 aa16.49■□□□□ 0.23
LINC00339-208ENST00000634934 PSMC4P43686 418 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms