RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 POU3F3P20264 500 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 SCRN1Q12765 414 aa6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 SF1Q15637 639 aaKnown RBP6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 DPY19L1Q2PZI1 675 aa6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 BRDTQ58F21 947 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 ACBD5Q5T8D3 534 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 E4F1Q66K89 784 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 IQCEQ6IPM2 695 aa6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 TMC3Q7Z5M5 1100 aa6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 NECAB2Q7Z6G3 386 aa6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 DDX53Q86TM3 631 aaKnown RBP6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 KIF18BQ86Y91 864 aa6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 IFNL3Q8IZI9 196 aa6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 ARMC10Q8N2F6 343 aa6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 MFSD4AQ8N468 514 aa6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 GPATCH2Q9NW75 528 aa6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 G3BP2Q9UN86 482 aaKnown RBP6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 ST14Q9Y5Y6 855 aa6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 BACE2Q9Y5Z0 518 aa6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 TRBV23OR9-2A0A075B6M9 112 aa6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 C2orf71A6NGG8 1288 aa6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 H0Y8X5 98 aa6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 CD3EP07766 207 aa6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 ZNF865P0CJ78 1059 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 SEPHS1P49903 392 aa6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 GUCY2FP51841 1108 aa6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 NTRK3Q16288 839 aa6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 MTDHQ86UE4 582 aaKnown RBP6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 KSR1Q8IVT5 923 aa6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 OR2W6PQ8NHA6 318 aa6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 WDR66Q8TBY9 1149 aa6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 USP7Q93009 1102 aa6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 C1orf159Q96HA4 380 aa6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 WNK4Q96J92 1243 aa6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 Q96M66 194 aa6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 TBC1D32Q96NH3 1257 aa6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 GPR62Q9BZJ7 368 aa6.77□□□□□ -1.33
TRAPPC9-216ENST00000634178 KDM5BQ9UGL1 1544 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 TCRBV16S1A1N1A0A5B0 115 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 BLACEA4D250 179 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 FAM155AB1AL88 458 aaPredicted RBP6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 MEIS1O00470 390 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 AURKAO14965 403 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 LEFTY1O75610 366 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 JMJD7P0C870 316 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 BMP8BP34820 402 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 SCNN1BP51168 640 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 GPR85P60893 370 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 GUCY1A3Q02108 690 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 STRN3Q13033 797 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 KCNAB2Q13303 367 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 SART3Q15020 963 aaKnown RBP6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 RSPO4Q2I0M5 234 aaPredicted RBP6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 DUSP27Q5VZP5 1158 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 EEF1DP3Q658K8 133 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 ARHGAP27Q6ZUM4 889 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 FGD2Q7Z6J4 655 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 PPIL6Q8IXY8 311 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 COPS5Q92905 334 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 SCLYQ96I15 445 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 MEGF10Q96KG7 1140 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 TTC1Q99614 292 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 GPR27Q9NS67 375 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 TNIKQ9UKE5 1360 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 PCF11O94913 1555 aaKnown RBP6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 CUL7Q14999 1698 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 MAGI3Q5TCQ9 1506 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 WASHC2CQ9Y4E1 1318 aa6.76□□□□□ -1.33
TRAPPC9-216ENST00000634178 ADAMTSL3P82987 1691 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 PTPRMP28827 1452 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 SSU72P8A0A1W2PR75 194 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 ZEB2O60315 1214 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 EYA4O95677 639 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 CRTAMO95727 393 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 LTBRP36941 435 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 EPHB1P54762 984 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 EVA1CP58658 441 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 TESK1Q15569 626 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 CDCA2Q69YH5 1023 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 RCSD1Q6JBY9 416 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 ZCCHC8Q6NZY4 707 aaKnown RBP6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 ZAR1Q86SH2 424 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 KREMEN2Q8NCW0 462 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 ORAI3Q9BRQ5 295 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 ALG1Q9BT22 464 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 HDAC8Q9BY41 377 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 GEMIN8Q9NWZ8 242 aaKnown RBP6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 SLC5A4Q9NY91 659 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 CAPN6Q9Y6Q1 641 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 CARMIL2Q6F5E8 1435 aa6.75□□□□□ -1.33
TRAPPC9-216ENST00000634178 DISP3Q9P2K9 1392 aa6.74□□□□□ -1.33
TRAPPC9-216ENST00000634178 STXBP3O00186 592 aa6.74□□□□□ -1.33
TRAPPC9-216ENST00000634178 GSTA4O15217 222 aa6.74□□□□□ -1.33
TRAPPC9-216ENST00000634178 KPNA6O60684 536 aa6.74□□□□□ -1.33
TRAPPC9-216ENST00000634178 THBDP07204 575 aa6.74□□□□□ -1.33
TRAPPC9-216ENST00000634178 PCBP3P57721 371 aaKnown RBP6.74□□□□□ -1.33
TRAPPC9-216ENST00000634178 TNK2Q07912 1038 aa6.74□□□□□ -1.33
TRAPPC9-216ENST00000634178 FAM50AQ14320 339 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms