RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CCDC88AQ3V6T2 1871 aa14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 DDX39AO00148 427 aaKnown RBP14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 HERVK_113P62684 666 aa14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 HTRA3P83110 453 aa14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 KIF23Q02241 960 aaPredicted RBP14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 RRP1BQ14684 758 aaKnown RBP14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 GMCL1P1Q8NEA9 526 aa14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 KCNG4Q8TDN1 519 aa14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 GMCL1Q96IK5 515 aa14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 SPZ1Q9BXG8 430 aa14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 ACAD9Q9H845 621 aa14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 JMJD4Q9H9V9 463 aa14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 NID2Q14112 1375 aa14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 FCER1AP12319 257 aa14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 NTRK3Q16288 839 aa14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 SPRYD7Q5W111 196 aa14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 C11orf57Q6ZUT1 292 aaPredicted RBP14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 MAD2L2Q9UI95 211 aa14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 PPP1R9AQ9ULJ8 1098 aa14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 PCDHA7Q9UN72 937 aa14.08□□□□□ -0.16
SYNGAP1-207ENST00000628646 UBA7P41226 1012 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 FSTL1Q12841 308 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 PFKFB3Q16875 520 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 LINC00301Q8NCQ3 95 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 CCDC47Q96A33 483 aaKnown RBP14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 CHMP2AO43633 222 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 R3HCC1Q9Y3T6 440 aaKnown RBP14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 QSER1Q2KHR3 1735 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 DLEC1Q9Y238 1755 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 BACH1O14867 736 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 GUCY1A2P33402 732 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 APLP1P51693 650 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 NR5A1Q13285 461 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 CREBRFQ8IUR6 639 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 PDILTQ8N807 584 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 MB21D1Q8N884 522 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 MMP19Q99542 508 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 ZHX1Q9UKY1 873 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 CLIC4Q9Y696 253 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 ZBTB22O15209 634 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 FOSP01100 380 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 WWC2Q6AWC2 1192 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 TRIM5Q9C035 493 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 DNAJC25Q9H1X3 360 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 EMILIN3Q9NT22 766 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 ANO10Q9NW15 660 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 AGTPBP1Q9UPW5 1226 aa14.07□□□□□ -0.16
SYNGAP1-207ENST00000628646 BAZ2AQ9UIF9 1905 aaKnown RBP14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 NOLC1Q14978 699 aaKnown RBP eCLIP14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 PRR16Q569H4 304 aa14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 RILPL1Q5EBL4 403 aa14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 CEP57L1Q8IYX8 460 aa14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 PCDHA4Q9UN74 947 aa14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 PALM3A6NDB9 673 aaPredicted RBP14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 INHBEP58166 350 aa14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 TTC38Q5R3I4 469 aa14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 PROCA1Q8NCQ7 364 aaPredicted RBP14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 RMDN3Q96TC7 470 aa14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 SCN9AQ15858 1988 aa14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 ABCB11O95342 1321 aa14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 hCG_1984214I3L0E3 225 aa14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 ALDH1A1P00352 501 aa14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 GNPTABQ3T906 1256 aa14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 DHX40Q8IX18 779 aaKnown RBP14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 ZNF713Q8N859 430 aaPredicted RBP14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 POLR3EQ9NVU0 708 aa14.06□□□□□ -0.16
SYNGAP1-207ENST00000628646 ROBO3Q96MS0 1386 aa14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 NOP56O00567 594 aaKnown RBP14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 FGRP09769 529 aa14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 TXKP42681 527 aa14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 JAG1P78504 1218 aa14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 AXDND1Q5T1B0 1012 aaPredicted RBP14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 TREML2Q5T2D2 321 aa14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 GALNT17Q6IS24 598 aa14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 SEPT14Q6ZU15 432 aa14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 MKL1Q969V6 931 aa14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 A0A087WWV3 80 aa14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 GCLCP48506 637 aaPredicted RBP14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 NOSTRINQ8IVI9 506 aa14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 FSIP1Q8NA03 581 aa14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 POTECB2RU33 542 aa14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 TAL1P17542 331 aaPredicted RBP14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 CYP2B6P20813 491 aa14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 FAM160A1Q05DH4 1040 aa14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 BAATQ14032 418 aaPredicted RBP14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 ADALQ6DHV7 355 aa14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 NBPF11Q86T75 865 aa14.05□□□□□ -0.16
SYNGAP1-207ENST00000628646 A0A1W2PQ27 194 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 A0A1W2PQ64 194 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 A0A1W2PQD8 194 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 BMP15O95972 392 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 ZNF75DP51815 510 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 NLRX1Q86UT6 975 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 NRBP1Q9UHY1 535 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 AFG3L2Q9Y4W6 797 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 PHF20L1A8MW92 1017 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 ZBTB48P10074 688 aaPredicted RBP14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 HOXD10P28358 340 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 DSG3P32926 999 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 TMEM132AQ24JP5 1023 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms