RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 ITGB8P26012 769 aa14.16□□□□□ -0.14
UBR1-212ENST00000627960 RPS6P62753 249 aaKnown RBP14.16□□□□□ -0.14
UBR1-212ENST00000627960 SEC23AQ15436 765 aa14.16□□□□□ -0.14
UBR1-212ENST00000627960 SHHQ15465 462 aa14.16□□□□□ -0.14
UBR1-212ENST00000627960 CDC37Q16543 378 aaPredicted RBP14.16□□□□□ -0.14
UBR1-212ENST00000627960 TMEM63BQ5T3F8 832 aa14.16□□□□□ -0.14
UBR1-212ENST00000627960 KIAA1211Q6ZU35 1233 aa14.16□□□□□ -0.14
UBR1-212ENST00000627960 CYB5R4Q7L1T6 521 aa14.16□□□□□ -0.14
UBR1-212ENST00000627960 TLK2Q86UE8 772 aa14.16□□□□□ -0.14
UBR1-212ENST00000627960 ADGRF4Q8IZF3 695 aa14.16□□□□□ -0.14
UBR1-212ENST00000627960 MROH7Q68CQ1 1323 aa14.15□□□□□ -0.14
UBR1-212ENST00000627960 SGSM2O43147 1006 aa14.15□□□□□ -0.14
UBR1-212ENST00000627960 CABYRO75952 493 aa14.15□□□□□ -0.14
UBR1-212ENST00000627960 PTGS1P23219 599 aa14.15□□□□□ -0.14
UBR1-212ENST00000627960 TRDNQ13061 729 aa14.15□□□□□ -0.14
UBR1-212ENST00000627960 FSCN1Q16658 493 aaKnown RBP14.15□□□□□ -0.14
UBR1-212ENST00000627960 USH1GQ495M9 461 aa14.15□□□□□ -0.14
UBR1-212ENST00000627960 C9orf50Q5SZB4 431 aa14.15□□□□□ -0.14
UBR1-212ENST00000627960 IFIT1BQ5T764 474 aaKnown RBP14.15□□□□□ -0.14
UBR1-212ENST00000627960 DEFB123Q8N688 67 aa14.15□□□□□ -0.14
UBR1-212ENST00000627960 MAF1Q9H063 256 aa14.15□□□□□ -0.14
UBR1-212ENST00000627960 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
UBR1-212ENST00000627960 ABCB11O95342 1321 aa14.15□□□□□ -0.15
UBR1-212ENST00000627960 RBM47A0AV96 593 aaKnown RBP14.14□□□□□ -0.15
UBR1-212ENST00000627960 ZEB2O60315 1214 aa14.14□□□□□ -0.15
UBR1-212ENST00000627960 EDNRBP24530 442 aa14.14□□□□□ -0.15
UBR1-212ENST00000627960 DUSP28Q4G0W2 176 aa14.14□□□□□ -0.15
UBR1-212ENST00000627960 CXCL17Q6UXB2 119 aa14.14□□□□□ -0.15
UBR1-212ENST00000627960 Q7L0L9 218 aa14.14□□□□□ -0.15
UBR1-212ENST00000627960 SLC43A3Q8NBI5 491 aa14.14□□□□□ -0.15
UBR1-212ENST00000627960 DNERQ8NFT8 737 aa14.14□□□□□ -0.15
UBR1-212ENST00000627960 TBC1D5Q92609 795 aa14.14□□□□□ -0.15
UBR1-212ENST00000627960 MPHOSPH6Q99547 160 aaKnown RBP14.14□□□□□ -0.15
UBR1-212ENST00000627960 WDR11Q9BZH6 1224 aa14.14□□□□□ -0.15
UBR1-212ENST00000627960 JMJD4Q9H9V9 463 aa14.14□□□□□ -0.15
UBR1-212ENST00000627960 VAT1LQ9HCJ6 419 aa14.14□□□□□ -0.15
UBR1-212ENST00000627960 TBX21Q9UL17 535 aa14.14□□□□□ -0.15
UBR1-212ENST00000627960 B4DLN1 442 aa14.13□□□□□ -0.15
UBR1-212ENST00000627960 DHX16O60231 1041 aaKnown RBP14.13□□□□□ -0.15
UBR1-212ENST00000627960 TIMP1P01033 207 aa14.13□□□□□ -0.15
UBR1-212ENST00000627960 MRPL12P52815 198 aaKnown RBP14.13□□□□□ -0.15
UBR1-212ENST00000627960 EPHB4P54760 987 aa14.13□□□□□ -0.15
UBR1-212ENST00000627960 FPGSQ05932 587 aa14.13□□□□□ -0.15
UBR1-212ENST00000627960 PDE4DQ08499 809 aa14.13□□□□□ -0.15
UBR1-212ENST00000627960 QRICH1Q2TAL8 776 aa14.13□□□□□ -0.15
UBR1-212ENST00000627960 FBXO11Q86XK2 927 aa14.13□□□□□ -0.15
UBR1-212ENST00000627960 STAG2Q8N3U4 1231 aa14.13□□□□□ -0.15
UBR1-212ENST00000627960 KIAA1217Q5T5P2 1943 aa14.13□□□□□ -0.15
UBR1-212ENST00000627960 BAZ2BQ9UIF8 2168 aaKnown RBP14.12□□□□□ -0.15
UBR1-212ENST00000627960 PALM3A6NDB9 673 aaPredicted RBP14.12□□□□□ -0.15
UBR1-212ENST00000627960 KLRF2D3W0D1 207 aa14.12□□□□□ -0.15
UBR1-212ENST00000627960 E7EWF7 191 aa14.12□□□□□ -0.15
UBR1-212ENST00000627960 TLR3O15455 904 aaKnown RBP14.12□□□□□ -0.15
UBR1-212ENST00000627960 ITGA7Q13683 1181 aa14.12□□□□□ -0.15
UBR1-212ENST00000627960 FAM109BQ6ICB4 259 aaPredicted RBP14.12□□□□□ -0.15
UBR1-212ENST00000627960 MCF2L2Q86YR7 1114 aa14.12□□□□□ -0.15
UBR1-212ENST00000627960 FAM126BQ8IXS8 530 aa14.12□□□□□ -0.15
UBR1-212ENST00000627960 MAP4K1Q92918 833 aa14.12□□□□□ -0.15
UBR1-212ENST00000627960 SEZ6LQ9BYH1 1024 aa14.12□□□□□ -0.15
UBR1-212ENST00000627960 MTMR10Q9NXD2 777 aa14.12□□□□□ -0.15
UBR1-212ENST00000627960 MAD2L2Q9UI95 211 aa14.12□□□□□ -0.15
UBR1-212ENST00000627960 MRPL11Q9Y3B7 192 aaKnown RBP14.12□□□□□ -0.15
UBR1-212ENST00000627960 TAF6LQ9Y6J9 622 aa14.12□□□□□ -0.15
UBR1-212ENST00000627960 GRIN2DO15399 1336 aa14.12□□□□□ -0.15
UBR1-212ENST00000627960 IFIT3O14879 490 aaKnown RBP14.11□□□□□ -0.15
UBR1-212ENST00000627960 NKRFO15226 690 aaKnown RBP eCLIP14.11□□□□□ -0.15
UBR1-212ENST00000627960 CD4P01730 458 aa14.11□□□□□ -0.15
UBR1-212ENST00000627960 MFSD5Q6N075 450 aa14.11□□□□□ -0.15
UBR1-212ENST00000627960 STOX1Q6ZVD7 989 aa14.11□□□□□ -0.15
UBR1-212ENST00000627960 NCOA7Q8NI08 942 aa14.11□□□□□ -0.15
UBR1-212ENST00000627960 SYTL5Q8TDW5 730 aaPredicted RBP14.11□□□□□ -0.15
UBR1-212ENST00000627960 SCFD2Q8WU76 684 aa14.11□□□□□ -0.15
UBR1-212ENST00000627960 MTMR8Q96EF0 704 aa14.11□□□□□ -0.15
UBR1-212ENST00000627960 TAAR1Q96RJ0 339 aa14.11□□□□□ -0.15
UBR1-212ENST00000627960 LAMA2P24043 3122 aaKnown RBP14.1□□□□□ -0.15
UBR1-212ENST00000627960 ERICH2A1L162 156 aa14.1□□□□□ -0.15
UBR1-212ENST00000627960 CPT1AP50416 773 aa14.1□□□□□ -0.15
UBR1-212ENST00000627960 GRM4Q14833 912 aa14.1□□□□□ -0.15
UBR1-212ENST00000627960 RALYLQ86SE5 291 aaKnown RBP14.1□□□□□ -0.15
UBR1-212ENST00000627960 OR6J1Q8NGC5 347 aa14.1□□□□□ -0.15
UBR1-212ENST00000627960 NSUN6Q8TEA1 469 aaKnown RBP14.1□□□□□ -0.15
UBR1-212ENST00000627960 AMNQ9BXJ7 453 aa14.1□□□□□ -0.15
UBR1-212ENST00000627960 SENP2Q9HC62 589 aa14.1□□□□□ -0.15
UBR1-212ENST00000627960 POLR3EQ9NVU0 708 aa14.1□□□□□ -0.15
UBR1-212ENST00000627960 COL20A1Q9P218 1284 aa14.1□□□□□ -0.15
UBR1-212ENST00000627960 RBM8AQ9Y5S9 174 aaKnown RBP14.1□□□□□ -0.15
UBR1-212ENST00000627960 ZBTB5O15062 677 aa14.09□□□□□ -0.15
UBR1-212ENST00000627960 MYL3P08590 195 aa14.09□□□□□ -0.15
UBR1-212ENST00000627960 TXNP10599 105 aaKnown RBP14.09□□□□□ -0.15
UBR1-212ENST00000627960 PSMC6P62333 389 aa14.09□□□□□ -0.15
UBR1-212ENST00000627960 SMAD3P84022 425 aaKnown RBP14.09□□□□□ -0.15
UBR1-212ENST00000627960 PPIGQ13427 754 aaKnown RBP eCLIP14.09□□□□□ -0.15
UBR1-212ENST00000627960 WTAPQ15007 396 aa14.09□□□□□ -0.15
UBR1-212ENST00000627960 SART3Q15020 963 aaKnown RBP14.09□□□□□ -0.15
UBR1-212ENST00000627960 PPP2R5BQ15173 497 aa14.09□□□□□ -0.15
UBR1-212ENST00000627960 CHST3Q7LGC8 479 aa14.09□□□□□ -0.15
UBR1-212ENST00000627960 MB21D2Q8IYB1 491 aaPredicted RBP14.09□□□□□ -0.15
UBR1-212ENST00000627960 RNPC3Q96LT9 517 aaKnown RBP14.09□□□□□ -0.15
UBR1-212ENST00000627960 IWS1Q96ST2 819 aa14.09□□□□□ -0.15
UBR1-212ENST00000627960 RMDN3Q96TC7 470 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms