RNA–Protein interactions for RNA: ENST00000625521.2

UBAP1-204, Transcript of ubiquitin associated protein 1, humanhuman

TSL 2 BASIC

Gene UBAP1, Length 2,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-204ENST00000625521 VSTM4Q8IW00 320 aa22.72■■□□□ 1.23
UBAP1-204ENST00000625521 PDILTQ8N807 584 aa22.72■■□□□ 1.23
UBAP1-204ENST00000625521 SPATA20Q8TB22 786 aa22.72■■□□□ 1.23
UBAP1-204ENST00000625521 ARID3AQ99856 593 aa22.72■■□□□ 1.23
UBAP1-204ENST00000625521 FHDC1Q9C0D6 1143 aaPredicted RBP22.72■■□□□ 1.23
UBAP1-204ENST00000625521 PSTPIP2Q9H939 334 aa22.72■■□□□ 1.23
UBAP1-204ENST00000625521 GINM1Q9NU53 330 aa22.72■■□□□ 1.23
UBAP1-204ENST00000625521 TMEM260Q9NX78 707 aa22.72■■□□□ 1.23
UBAP1-204ENST00000625521 PCDHA1Q9Y5I3 950 aa22.72■■□□□ 1.23
UBAP1-204ENST00000625521 PHF20L1A8MW92 1017 aa22.72■■□□□ 1.23
UBAP1-204ENST00000625521 CCNT1O60563 726 aaKnown RBP22.72■■□□□ 1.23
UBAP1-204ENST00000625521 SERPINC1P01008 464 aa22.72■■□□□ 1.23
UBAP1-204ENST00000625521 FMR1Q06787 632 aaKnown RBP eCLIP22.72■■□□□ 1.23
UBAP1-204ENST00000625521 GPC2Q8N158 579 aa22.72■■□□□ 1.23
UBAP1-204ENST00000625521 PPP1R13BQ96KQ4 1090 aa22.72■■□□□ 1.23
UBAP1-204ENST00000625521 AMNQ9BXJ7 453 aa22.72■■□□□ 1.23
UBAP1-204ENST00000625521 VCPKMTQ9H867 229 aa22.72■■□□□ 1.23
UBAP1-204ENST00000625521 SPICE1Q8N0Z3 855 aa22.71■■□□□ 1.23
UBAP1-204ENST00000625521 MED15Q96RN5 788 aa22.71■■□□□ 1.23
UBAP1-204ENST00000625521 DEFB129Q9H1M3 183 aa22.71■■□□□ 1.23
UBAP1-204ENST00000625521 A0A087X0B3 334 aa22.7■■□□□ 1.23
UBAP1-204ENST00000625521 TXLNAP40222 546 aa22.7■■□□□ 1.23
UBAP1-204ENST00000625521 STAT2P52630 851 aa22.7■■□□□ 1.23
UBAP1-204ENST00000625521 TMEM60Q9H2L4 133 aa22.7■■□□□ 1.23
UBAP1-204ENST00000625521 TMX1Q9H3N1 280 aa22.7■■□□□ 1.23
UBAP1-204ENST00000625521 SLFN14P0C7P3 912 aa22.7■■□□□ 1.22
UBAP1-204ENST00000625521 ZNF18P17022 549 aa22.7■■□□□ 1.22
UBAP1-204ENST00000625521 NAA30Q147X3 362 aaPredicted RBP22.7■■□□□ 1.22
UBAP1-204ENST00000625521 FBXO11Q86XK2 927 aa22.7■■□□□ 1.22
UBAP1-204ENST00000625521 PDCL2Q8N4E4 241 aa22.7■■□□□ 1.22
UBAP1-204ENST00000625521 TRIML1Q8N9V2 468 aa22.7■■□□□ 1.22
UBAP1-204ENST00000625521 MLKLQ8NB16 471 aa22.7■■□□□ 1.22
UBAP1-204ENST00000625521 SMARCE1Q969G3 411 aa22.7■■□□□ 1.22
UBAP1-204ENST00000625521 DHX58Q96C10 678 aa22.7■■□□□ 1.22
UBAP1-204ENST00000625521 SCAF8Q9UPN6 1271 aaKnown RBP22.7■■□□□ 1.22
UBAP1-204ENST00000625521 OR52Z1P0C646 297 aa22.69■■□□□ 1.22
UBAP1-204ENST00000625521 APOBEC3FQ8IUX4 373 aaKnown RBP22.69■■□□□ 1.22
UBAP1-204ENST00000625521 GPRC5DQ9NZD1 345 aa22.69■■□□□ 1.22
UBAP1-204ENST00000625521 PRR12Q9ULL5 1215 aa22.69■■□□□ 1.22
UBAP1-204ENST00000625521 ASTN2O75129 1339 aaPredicted RBP22.69■■□□□ 1.22
UBAP1-204ENST00000625521 TRAF1Q13077 416 aa22.69■■□□□ 1.22
UBAP1-204ENST00000625521 IQUBQ8NA54 791 aa22.69■■□□□ 1.22
UBAP1-204ENST00000625521 ENOX1Q8TC92 643 aaKnown RBP22.69■■□□□ 1.22
UBAP1-204ENST00000625521 HOOK2Q96ED9 719 aa22.69■■□□□ 1.22
UBAP1-204ENST00000625521 KIF2AO00139 706 aaPredicted RBP22.68■■□□□ 1.22
UBAP1-204ENST00000625521 PLA2G6O60733 806 aa22.68■■□□□ 1.22
UBAP1-204ENST00000625521 UBE2SQ16763 222 aa22.68■■□□□ 1.22
UBAP1-204ENST00000625521 PTPN21Q16825 1174 aa22.68■■□□□ 1.22
UBAP1-204ENST00000625521 KIAA1755Q5JYT7 1200 aa22.68■■□□□ 1.22
UBAP1-204ENST00000625521 MCTP2Q6DN12 878 aa22.68■■□□□ 1.22
UBAP1-204ENST00000625521 SH3RF1Q7Z6J0 888 aa22.68■■□□□ 1.22
UBAP1-204ENST00000625521 CHURC1Q8WUH1 139 aa22.68■■□□□ 1.22
UBAP1-204ENST00000625521 CTNND1O60716 968 aaKnown RBP22.67■■□□□ 1.22
UBAP1-204ENST00000625521 PRKCSHP14314 528 aaPredicted RBP22.67■■□□□ 1.22
UBAP1-204ENST00000625521 FAM83BQ5T0W9 1011 aa22.67■■□□□ 1.22
UBAP1-204ENST00000625521 AK8Q96MA6 479 aa22.67■■□□□ 1.22
UBAP1-204ENST00000625521 NFE2L3Q9Y4A8 694 aa22.67■■□□□ 1.22
UBAP1-204ENST00000625521 TBX2Q13207 712 aaPredicted RBP22.67■■□□□ 1.22
UBAP1-204ENST00000625521 DCAF15Q66K64 600 aa22.67■■□□□ 1.22
UBAP1-204ENST00000625521 KIF18AQ8NI77 898 aa22.67■■□□□ 1.22
UBAP1-204ENST00000625521 NAP1L4Q99733 375 aaKnown RBP22.67■■□□□ 1.22
UBAP1-204ENST00000625521 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.67■■□□□ 1.22
UBAP1-204ENST00000625521 E2F4Q16254 413 aa22.66■■□□□ 1.22
UBAP1-204ENST00000625521 PPP4R3AQ6IN85 833 aa22.66■■□□□ 1.22
UBAP1-204ENST00000625521 FAM160B2Q86V87 743 aa22.66■■□□□ 1.22
UBAP1-204ENST00000625521 AP3B2Q13367 1082 aa22.65■■□□□ 1.22
UBAP1-204ENST00000625521 HSP90AA4PQ58FG1 418 aa22.65■■□□□ 1.22
UBAP1-204ENST00000625521 ANGEL2Q5VTE6 544 aaKnown RBP22.65■■□□□ 1.22
UBAP1-204ENST00000625521 TEX2Q8IWB9 1127 aa22.65■■□□□ 1.22
UBAP1-204ENST00000625521 TRMT44Q8IYL2 757 aaKnown RBP22.65■■□□□ 1.22
UBAP1-204ENST00000625521 PAGE5Q96GU1 130 aa22.65■■□□□ 1.22
UBAP1-204ENST00000625521 DACH1Q9UI36 760 aa22.65■■□□□ 1.22
UBAP1-204ENST00000625521 ZNF215Q9UL58 517 aaPredicted RBP22.65■■□□□ 1.22
UBAP1-204ENST00000625521 NRDCO43847 1150 aa22.65■■□□□ 1.22
UBAP1-204ENST00000625521 GOLGA8FQ08AF8 430 aa22.65■■□□□ 1.22
UBAP1-204ENST00000625521 GOLGA8DPQ0D2H9 430 aa22.65■■□□□ 1.22
UBAP1-204ENST00000625521 TMEM139Q8IV31 216 aa22.65■■□□□ 1.22
UBAP1-204ENST00000625521 CCSER1Q9C0I3 900 aa22.65■■□□□ 1.22
UBAP1-204ENST00000625521 FEM1BQ9UK73 627 aa22.65■■□□□ 1.22
UBAP1-204ENST00000625521 GCFC2P16383 781 aaKnown RBP22.64■■□□□ 1.22
UBAP1-204ENST00000625521 UBA7P41226 1012 aa22.64■■□□□ 1.22
UBAP1-204ENST00000625521 SNAP25P60880 206 aa22.64■■□□□ 1.22
UBAP1-204ENST00000625521 ZYXQ15942 572 aaKnown RBP22.64■■□□□ 1.22
UBAP1-204ENST00000625521 NBPF12Q5TAG4 269 aaPredicted RBP22.64■■□□□ 1.22
UBAP1-204ENST00000625521 TRPM4Q8TD43 1214 aa22.64■■□□□ 1.22
UBAP1-204ENST00000625521 FEZ1Q99689 392 aa22.64■■□□□ 1.22
UBAP1-204ENST00000625521 SYT17Q9BSW7 474 aa22.64■■□□□ 1.22
UBAP1-204ENST00000625521 ZNF341Q9BYN7 854 aa22.64■■□□□ 1.22
UBAP1-204ENST00000625521 GLIS2Q9BZE0 524 aaPredicted RBP22.64■■□□□ 1.22
UBAP1-204ENST00000625521 DICER1Q9UPY3 1922 aaKnown RBP22.64■■□□□ 1.21
UBAP1-204ENST00000625521 USP17L15C9J2P7 530 aa22.64■■□□□ 1.21
UBAP1-204ENST00000625521 USP17L13C9JLJ4 530 aa22.64■■□□□ 1.21
UBAP1-204ENST00000625521 USP17L11C9JVI0 530 aa22.64■■□□□ 1.21
UBAP1-204ENST00000625521 USP17L18D6R9N7 530 aa22.64■■□□□ 1.21
UBAP1-204ENST00000625521 USP17L22D6RA61 530 aa22.64■■□□□ 1.21
UBAP1-204ENST00000625521 USP17L17D6RBQ6 530 aa22.64■■□□□ 1.21
UBAP1-204ENST00000625521 USP17L19D6RCP7 530 aa22.64■■□□□ 1.21
UBAP1-204ENST00000625521 USP17L20D6RJB6 530 aa22.64■■□□□ 1.21
UBAP1-204ENST00000625521 USP17L24Q0WX57 530 aa22.64■■□□□ 1.21
UBAP1-204ENST00000625521 USH1GQ495M9 461 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms