RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 RNF207Q6ZRF8 634 aa14.69□□□□□ -0.06
PNKP-217ENST00000625216 RUFY3Q7L099 469 aa14.69□□□□□ -0.06
PNKP-217ENST00000625216 RALYLQ86SE5 291 aaKnown RBP14.69□□□□□ -0.06
PNKP-217ENST00000625216 ADGRF4Q8IZF3 695 aa14.69□□□□□ -0.06
PNKP-217ENST00000625216 NCOA7Q8NI08 942 aa14.69□□□□□ -0.06
PNKP-217ENST00000625216 TCEANC2Q96MN5 208 aa14.69□□□□□ -0.06
PNKP-217ENST00000625216 MPHOSPH6Q99547 160 aaKnown RBP14.69□□□□□ -0.06
PNKP-217ENST00000625216 UBE2OQ9C0C9 1292 aaKnown RBP14.69□□□□□ -0.06
PNKP-217ENST00000625216 VTA1Q9NP79 307 aa14.69□□□□□ -0.06
PNKP-217ENST00000625216 Q9Y3F1 56 aa14.69□□□□□ -0.06
PNKP-217ENST00000625216 CYP46A1Q9Y6A2 500 aa14.69□□□□□ -0.06
PNKP-217ENST00000625216 ELP1O95163 1332 aa14.68□□□□□ -0.06
PNKP-217ENST00000625216 A0A1W2PQ45 241 aaPredicted RBP14.68□□□□□ -0.06
PNKP-217ENST00000625216 A0A1W2PQY0 241 aa14.68□□□□□ -0.06
PNKP-217ENST00000625216 B4DLN1 442 aa14.68□□□□□ -0.06
PNKP-217ENST00000625216 K7ELQ4 463 aaPredicted RBP14.68□□□□□ -0.06
PNKP-217ENST00000625216 C6orf222P0C671 652 aaPredicted RBP14.68□□□□□ -0.06
PNKP-217ENST00000625216 MRPL12P52815 198 aaKnown RBP14.68□□□□□ -0.06
PNKP-217ENST00000625216 AK2P54819 239 aa14.68□□□□□ -0.06
PNKP-217ENST00000625216 SART3Q15020 963 aaKnown RBP14.68□□□□□ -0.06
PNKP-217ENST00000625216 TRIM60Q495X7 471 aa14.68□□□□□ -0.06
PNKP-217ENST00000625216 GNASQ5JWF2 1037 aa14.68□□□□□ -0.06
PNKP-217ENST00000625216 CYB5R4Q7L1T6 521 aa14.68□□□□□ -0.06
PNKP-217ENST00000625216 MB21D2Q8IYB1 491 aaPredicted RBP14.68□□□□□ -0.06
PNKP-217ENST00000625216 TDHQ8IZJ6 230 aa14.68□□□□□ -0.06
PNKP-217ENST00000625216 DNERQ8NFT8 737 aa14.68□□□□□ -0.06
PNKP-217ENST00000625216 LENG1Q96BZ8 264 aaPredicted RBP14.68□□□□□ -0.06
PNKP-217ENST00000625216 GLT1D1Q96MS3 346 aa14.68□□□□□ -0.06
PNKP-217ENST00000625216 STARD7Q9NQZ5 370 aa14.68□□□□□ -0.06
PNKP-217ENST00000625216 PDRG1Q9NUG6 133 aa14.68□□□□□ -0.06
PNKP-217ENST00000625216 ASTN1O14525 1302 aa14.67□□□□□ -0.06
PNKP-217ENST00000625216 ABCB11O95342 1321 aa14.67□□□□□ -0.06
PNKP-217ENST00000625216 DNAH12Q6ZR08 3092 aa14.67□□□□□ -0.06
PNKP-217ENST00000625216 IFIT3O14879 490 aaKnown RBP14.67□□□□□ -0.06
PNKP-217ENST00000625216 ALDH5A1P51649 535 aaPredicted RBP14.67□□□□□ -0.06
PNKP-217ENST00000625216 RPS6P62753 249 aaKnown RBP14.67□□□□□ -0.06
PNKP-217ENST00000625216 TLE2Q04725 743 aa14.67□□□□□ -0.06
PNKP-217ENST00000625216 CDC37Q16543 378 aaPredicted RBP14.67□□□□□ -0.06
PNKP-217ENST00000625216 TAPT1Q6NXT6 567 aa14.67□□□□□ -0.06
PNKP-217ENST00000625216 NOL8Q76FK4 1167 aaKnown RBP14.67□□□□□ -0.06
PNKP-217ENST00000625216 MCF2L2Q86YR7 1114 aa14.67□□□□□ -0.06
PNKP-217ENST00000625216 TOX2Q96NM4 488 aa14.67□□□□□ -0.06
PNKP-217ENST00000625216 AP5M1Q9H0R1 490 aa14.67□□□□□ -0.06
PNKP-217ENST00000625216 GNEQ9Y223 722 aaKnown RBP14.67□□□□□ -0.06
PNKP-217ENST00000625216 PLXNA1Q9UIW2 1896 aa14.67□□□□□ -0.06
PNKP-217ENST00000625216 ALPK3Q96L96 1907 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 SMCHD1A6NHR9 2005 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 KLRF2D3W0D1 207 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 ADCY6O43306 1168 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 DHX16O60231 1041 aaKnown RBP14.66□□□□□ -0.06
PNKP-217ENST00000625216 ZEB2O60315 1214 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 ASGR1P07306 291 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 CALML3P27482 149 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 ANTXR2P58335 489 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 MDM2Q00987 491 aaPredicted RBP14.66□□□□□ -0.06
PNKP-217ENST00000625216 TRAF1Q13077 416 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 LRIT3Q3SXY7 679 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 USH1GQ495M9 461 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 ANKRD33Q7Z3H0 272 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 FBXO11Q86XK2 927 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 MTA3Q9BTC8 594 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 CPVLQ9H3G5 476 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 JMJD4Q9H9V9 463 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 MRPL11Q9Y3B7 192 aaKnown RBP14.66□□□□□ -0.06
PNKP-217ENST00000625216 FRMPD3Q5JV73 1810 aa14.66□□□□□ -0.06
PNKP-217ENST00000625216 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.65□□□□□ -0.06
PNKP-217ENST00000625216 RBM47A0AV96 593 aaKnown RBP14.65□□□□□ -0.06
PNKP-217ENST00000625216 PALM3A6NDB9 673 aaPredicted RBP14.65□□□□□ -0.06
PNKP-217ENST00000625216 DCDC2CA8MYV0 355 aa14.65□□□□□ -0.06
PNKP-217ENST00000625216 CABYRO75952 493 aa14.65□□□□□ -0.06
PNKP-217ENST00000625216 LARGE1O95461 756 aa14.65□□□□□ -0.06
PNKP-217ENST00000625216 SMPD1P17405 629 aa14.65□□□□□ -0.06
PNKP-217ENST00000625216 EDNRBP24530 442 aa14.65□□□□□ -0.06
PNKP-217ENST00000625216 MCM2P49736 904 aa14.65□□□□□ -0.06
PNKP-217ENST00000625216 EXOSC10Q01780 885 aaKnown RBP14.65□□□□□ -0.06
PNKP-217ENST00000625216 TOB2Q14106 344 aaPredicted RBP14.65□□□□□ -0.06
PNKP-217ENST00000625216 WTAPQ15007 396 aa14.65□□□□□ -0.06
PNKP-217ENST00000625216 QRICH1Q2TAL8 776 aa14.65□□□□□ -0.06
PNKP-217ENST00000625216 SLC30A10Q6XR72 485 aa14.65□□□□□ -0.06
PNKP-217ENST00000625216 IL27Q8NEV9 243 aa14.65□□□□□ -0.06
PNKP-217ENST00000625216 PURBQ96QR8 312 aaKnown RBP14.65□□□□□ -0.06
PNKP-217ENST00000625216 SEZ6LQ9BYH1 1024 aa14.65□□□□□ -0.06
PNKP-217ENST00000625216 LRRC2Q9BYS8 371 aa14.65□□□□□ -0.06
PNKP-217ENST00000625216 VAT1LQ9HCJ6 419 aa14.65□□□□□ -0.06
PNKP-217ENST00000625216 PDLIM7Q9NR12 457 aa14.65□□□□□ -0.06
PNKP-217ENST00000625216 PDGFCQ9NRA1 345 aa14.65□□□□□ -0.06
PNKP-217ENST00000625216 MROH7Q68CQ1 1323 aa14.65□□□□□ -0.06
PNKP-217ENST00000625216 MYADML2A6NDP7 307 aa14.64□□□□□ -0.07
PNKP-217ENST00000625216 KIAA0355O15063 1070 aa14.64□□□□□ -0.07
PNKP-217ENST00000625216 CTAGE5O15320 804 aa14.64□□□□□ -0.07
PNKP-217ENST00000625216 DYNC1LI2O43237 492 aaPredicted RBP14.64□□□□□ -0.07
PNKP-217ENST00000625216 HMGB1P09429 215 aaKnown RBP14.64□□□□□ -0.07
PNKP-217ENST00000625216 CLTBP09497 229 aa14.64□□□□□ -0.07
PNKP-217ENST00000625216 CDK7P50613 346 aa14.64□□□□□ -0.07
PNKP-217ENST00000625216 PDE4DQ08499 809 aa14.64□□□□□ -0.07
PNKP-217ENST00000625216 DUSP28Q4G0W2 176 aa14.64□□□□□ -0.07
PNKP-217ENST00000625216 GPR153Q6NV75 609 aa14.64□□□□□ -0.07
PNKP-217ENST00000625216 DHX32Q7L7V1 743 aaKnown RBP14.64□□□□□ -0.07
PNKP-217ENST00000625216 EEPD1Q7L9B9 569 aa14.64□□□□□ -0.07
PNKP-217ENST00000625216 CATIPQ7Z7H3 387 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms