RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 APOA5Q6Q788 366 aa16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 Q6ZUG5 572 aa16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 NOL8Q76FK4 1167 aaKnown RBP16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 EEPD1Q7L9B9 569 aa16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 UBE2Q1Q7Z7E8 422 aa16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 ARRDC4Q8NCT1 418 aa16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 RGS22Q8NE09 1264 aa16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 MTMR8Q96EF0 704 aa16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 SPZ1Q9BXG8 430 aa16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 XPNPEP3Q9NQH7 507 aa16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 MCM3APO60318 1980 aa16.18■□□□□ 0.18
PCDHGC3-208ENST00000622836 KBTBD13C9JR72 458 aa16.18■□□□□ 0.18
PCDHGC3-208ENST00000622836 PPP1R11O60927 126 aaPredicted RBP16.18■□□□□ 0.18
PCDHGC3-208ENST00000622836 RPS6KB1P23443 525 aa16.18■□□□□ 0.18
PCDHGC3-208ENST00000622836 RTN1Q16799 776 aa16.18■□□□□ 0.18
PCDHGC3-208ENST00000622836 SLC35G1Q2M3R5 365 aa16.18■□□□□ 0.18
PCDHGC3-208ENST00000622836 CCDC144BQ3MJ40 725 aa16.18■□□□□ 0.18
PCDHGC3-208ENST00000622836 GJC2Q5T442 439 aaPredicted RBP16.18■□□□□ 0.18
PCDHGC3-208ENST00000622836 CMTR1Q8N1G2 835 aaKnown RBP16.18■□□□□ 0.18
PCDHGC3-208ENST00000622836 CCDC82Q8N4S0 544 aa16.18■□□□□ 0.18
PCDHGC3-208ENST00000622836 BRF1Q92994 677 aa16.18■□□□□ 0.18
PCDHGC3-208ENST00000622836 LENG1Q96BZ8 264 aaPredicted RBP16.18■□□□□ 0.18
PCDHGC3-208ENST00000622836 RBM28Q9NW13 759 aaKnown RBP16.18■□□□□ 0.18
PCDHGC3-208ENST00000622836 DDX49Q9Y6V7 483 aaKnown RBP16.18■□□□□ 0.18
PCDHGC3-208ENST00000622836 ASTN1O14525 1302 aa16.18■□□□□ 0.18
PCDHGC3-208ENST00000622836 GOLGA8AA7E2F4 631 aa16.17■□□□□ 0.18
PCDHGC3-208ENST00000622836 GOLGA8BA8MQT2 603 aa16.17■□□□□ 0.18
PCDHGC3-208ENST00000622836 DNM1LO00429 736 aa16.17■□□□□ 0.18
PCDHGC3-208ENST00000622836 SMARCA1P28370 1054 aa16.17■□□□□ 0.18
PCDHGC3-208ENST00000622836 PDE4DQ08499 809 aa16.17■□□□□ 0.18
PCDHGC3-208ENST00000622836 RNF180Q86T96 592 aa16.17■□□□□ 0.18
PCDHGC3-208ENST00000622836 FBXO16Q8IX29 292 aaPredicted RBP16.17■□□□□ 0.18
PCDHGC3-208ENST00000622836 SRBD1Q8N5C6 995 aaKnown RBP16.17■□□□□ 0.18
PCDHGC3-208ENST00000622836 DNERQ8NFT8 737 aa16.17■□□□□ 0.18
PCDHGC3-208ENST00000622836 TBC1D5Q92609 795 aa16.17■□□□□ 0.18
PCDHGC3-208ENST00000622836 MAF1Q9H063 256 aa16.17■□□□□ 0.18
PCDHGC3-208ENST00000622836 BRPF3Q9ULD4 1205 aa16.17■□□□□ 0.18
PCDHGC3-208ENST00000622836 FRMPD3Q5JV73 1810 aa16.17■□□□□ 0.18
PCDHGC3-208ENST00000622836 LOC102724159A0A0B4J2E5 919 aa16.16■□□□□ 0.18
PCDHGC3-208ENST00000622836 PGK1P00558 417 aa16.16■□□□□ 0.18
PCDHGC3-208ENST00000622836 MNX1P50219 401 aaPredicted RBP16.16■□□□□ 0.18
PCDHGC3-208ENST00000622836 APOBRQ0VD83 1088 aa16.16■□□□□ 0.18
PCDHGC3-208ENST00000622836 PWP2Q15269 919 aaKnown RBP16.16■□□□□ 0.18
PCDHGC3-208ENST00000622836 TMTC3Q6ZXV5 915 aa16.16■□□□□ 0.18
PCDHGC3-208ENST00000622836 RUFY3Q7L099 469 aa16.16■□□□□ 0.18
PCDHGC3-208ENST00000622836 SYTL5Q8TDW5 730 aaPredicted RBP16.16■□□□□ 0.18
PCDHGC3-208ENST00000622836 SENP6Q9GZR1 1112 aaPredicted RBP16.16■□□□□ 0.18
PCDHGC3-208ENST00000622836 SPC25Q9HBM1 224 aa16.16■□□□□ 0.18
PCDHGC3-208ENST00000622836 VTA1Q9NP79 307 aa16.16■□□□□ 0.18
PCDHGC3-208ENST00000622836 CYP46A1Q9Y6A2 500 aa16.16■□□□□ 0.18
PCDHGC3-208ENST00000622836 EVI5O60447 810 aa16.15■□□□□ 0.18
PCDHGC3-208ENST00000622836 ADCYAP1R1P41586 468 aa16.15■□□□□ 0.18
PCDHGC3-208ENST00000622836 METAP2P50579 478 aaKnown RBP eCLIP16.15■□□□□ 0.18
PCDHGC3-208ENST00000622836 TNFAIP2Q03169 654 aa16.15■□□□□ 0.18
PCDHGC3-208ENST00000622836 LRRC41Q15345 812 aa16.15■□□□□ 0.18
PCDHGC3-208ENST00000622836 ARHGEF16Q5VV41 709 aa16.15■□□□□ 0.18
PCDHGC3-208ENST00000622836 NSUN6Q8TEA1 469 aaKnown RBP16.15■□□□□ 0.18
PCDHGC3-208ENST00000622836 RMDN3Q96TC7 470 aa16.15■□□□□ 0.18
PCDHGC3-208ENST00000622836 LCTP09848 1927 aa16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 CCDC196A0A1B0GTZ2 297 aa16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 hCG_1642624A0A1W2PR95 340 aa16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 GCOM1H8Y6P7 765 aaPredicted RBP16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 DUSP11O75319 330 aaKnown RBP16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 C6orf222P0C671 652 aaPredicted RBP16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 POLR2MP0CAP2 368 aa16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 HOXA13P31271 388 aaPredicted RBP16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 MORC4Q8TE76 937 aa16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 TAAR1Q96RJ0 339 aa16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 UPF3BQ9BZI7 483 aaKnown RBP16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 KATNBL1Q9H079 304 aa16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 ZSWIM6Q9HCJ5 1215 aa16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 PDGFCQ9NRA1 345 aa16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 MAP3K20Q9NYL2 800 aaKnown RBP16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 NR2E3Q9Y5X4 410 aa16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 SYNRGQ9UMZ2 1314 aa16.14■□□□□ 0.17
PCDHGC3-208ENST00000622836 OPLAHO14841 1288 aa16.13■□□□□ 0.17
PCDHGC3-208ENST00000622836 COL6A1P12109 1028 aa16.13■□□□□ 0.17
PCDHGC3-208ENST00000622836 EIF2AK2P19525 551 aaKnown RBP16.13■□□□□ 0.17
PCDHGC3-208ENST00000622836 HSD17B4P51659 736 aa16.13■□□□□ 0.17
PCDHGC3-208ENST00000622836 RCAN1P53805 252 aa16.13■□□□□ 0.17
PCDHGC3-208ENST00000622836 PRPF38BQ5VTL8 546 aaKnown RBP16.13■□□□□ 0.17
PCDHGC3-208ENST00000622836 IQSEC1Q6DN90 963 aa16.13■□□□□ 0.17
PCDHGC3-208ENST00000622836 HEATR3Q7Z4Q2 680 aa16.13■□□□□ 0.17
PCDHGC3-208ENST00000622836 FCHSD1Q86WN1 690 aa16.13■□□□□ 0.17
PCDHGC3-208ENST00000622836 SAMD3Q8N6K7 520 aa16.13■□□□□ 0.17
PCDHGC3-208ENST00000622836 CUL5Q93034 780 aa16.13■□□□□ 0.17
PCDHGC3-208ENST00000622836 FERMT2Q96AC1 680 aa16.13■□□□□ 0.17
PCDHGC3-208ENST00000622836 TM6SF1Q9BZW5 370 aa16.13■□□□□ 0.17
PCDHGC3-208ENST00000622836 COL20A1Q9P218 1284 aa16.13■□□□□ 0.17
PCDHGC3-208ENST00000622836 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.12■□□□□ 0.17
PCDHGC3-208ENST00000622836 ADCY6O43306 1168 aa16.12■□□□□ 0.17
PCDHGC3-208ENST00000622836 ATN1P54259 1190 aaPredicted RBP16.12■□□□□ 0.17
PCDHGC3-208ENST00000622836 PPP2R5BQ15173 497 aa16.12■□□□□ 0.17
PCDHGC3-208ENST00000622836 TAPT1Q6NXT6 567 aa16.12■□□□□ 0.17
PCDHGC3-208ENST00000622836 TLK2Q86UE8 772 aa16.12■□□□□ 0.17
PCDHGC3-208ENST00000622836 SMARCC2Q8TAQ2 1214 aa16.12■□□□□ 0.17
PCDHGC3-208ENST00000622836 IWS1Q96ST2 819 aa16.12■□□□□ 0.17
PCDHGC3-208ENST00000622836 AP5M1Q9H0R1 490 aa16.12■□□□□ 0.17
PCDHGC3-208ENST00000622836 PDRG1Q9NUG6 133 aa16.12■□□□□ 0.17
PCDHGC3-208ENST00000622836 DYNC1LI2O43237 492 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms