RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 NUDT12Q9BQG2 462 aa22.8■■□□□ 1.24
PDLIM2-221ENST00000622702 ZMYND12Q9H0C1 365 aa22.8■■□□□ 1.24
PDLIM2-221ENST00000622702 GJB4Q9NTQ9 266 aa22.8■■□□□ 1.24
PDLIM2-221ENST00000622702 IVNS1ABPQ9Y6Y0 642 aa22.8■■□□□ 1.24
PDLIM2-221ENST00000622702 OPLAHO14841 1288 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 PTPREP23469 700 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 IRF5Q13568 498 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 KRT40Q6A162 431 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.79■■□□□ 1.245e-6■■■□□ 17.2
PDLIM2-221ENST00000622702 SOCS4Q8WXH5 440 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 PHF20Q9BVI0 1012 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 MAF1Q9H063 256 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 FBXO40Q9UH90 709 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 CALML3P27482 149 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 GHRHRQ02643 423 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 MUM1L1Q5H9M0 696 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 MORN1Q5T089 497 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 GALNT17Q6IS24 598 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 SH3TC2Q8TF17 1288 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 GLT8D2Q9H1C3 349 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 ACAD9Q9H845 621 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 HOMER2Q9NSB8 354 aa22.79■■□□□ 1.24
PDLIM2-221ENST00000622702 SMCO2A6NFE2 343 aa22.78■■□□□ 1.24
PDLIM2-221ENST00000622702 NFIBO00712 420 aa22.78■■□□□ 1.24
PDLIM2-221ENST00000622702 ADCY3O60266 1144 aa22.78■■□□□ 1.24
PDLIM2-221ENST00000622702 PDIA4P13667 645 aaKnown RBP22.78■■□□□ 1.24
PDLIM2-221ENST00000622702 CYP2B6P20813 491 aa22.78■■□□□ 1.24
PDLIM2-221ENST00000622702 SYT1P21579 422 aa22.78■■□□□ 1.24
PDLIM2-221ENST00000622702 GNA11P29992 359 aa22.78■■□□□ 1.24
PDLIM2-221ENST00000622702 NLRP5P59047 1200 aa22.78■■□□□ 1.24
PDLIM2-221ENST00000622702 MCF2L2Q86YR7 1114 aa22.78■■□□□ 1.24
PDLIM2-221ENST00000622702 SAMD3Q8N6K7 520 aa22.78■■□□□ 1.24
PDLIM2-221ENST00000622702 PSTPIP2Q9H939 334 aa22.78■■□□□ 1.24
PDLIM2-221ENST00000622702 C6orf50Q9HD87 102 aa22.78■■□□□ 1.24
PDLIM2-221ENST00000622702 RIC8AQ9NPQ8 531 aa22.78■■□□□ 1.24
PDLIM2-221ENST00000622702 KCNJ14Q9UNX9 436 aa22.78■■□□□ 1.24
PDLIM2-221ENST00000622702 SLC15A5A6NIM6 579 aa22.77■■□□□ 1.24
PDLIM2-221ENST00000622702 CCDC85CA6NKD9 419 aa22.77■■□□□ 1.24
PDLIM2-221ENST00000622702 STRNO43815 780 aa22.77■■□□□ 1.24
PDLIM2-221ENST00000622702 MMP1P03956 469 aa22.77■■□□□ 1.24
PDLIM2-221ENST00000622702 ELNP15502 786 aa22.77■■□□□ 1.24
PDLIM2-221ENST00000622702 GRK4P32298 578 aa22.77■■□□□ 1.24
PDLIM2-221ENST00000622702 ADCY7P51828 1080 aa22.77■■□□□ 1.24
PDLIM2-221ENST00000622702 MRPL12P52815 198 aaKnown RBP22.77■■□□□ 1.24
PDLIM2-221ENST00000622702 FOSBP53539 338 aa22.77■■□□□ 1.24
PDLIM2-221ENST00000622702 NPY5RQ15761 445 aa22.77■■□□□ 1.24
PDLIM2-221ENST00000622702 DAGLBQ8NCG7 672 aa22.77■■□□□ 1.24
PDLIM2-221ENST00000622702 SLAIN1Q8ND83 568 aa22.77■■□□□ 1.24
PDLIM2-221ENST00000622702 USP6NLQ92738 828 aa22.77■■□□□ 1.24
PDLIM2-221ENST00000622702 CUL5Q93034 780 aa22.77■■□□□ 1.24
PDLIM2-221ENST00000622702 DDIT3P35638 169 aa22.76■■□□□ 1.23
PDLIM2-221ENST00000622702 MAP2K5Q13163 448 aa22.76■■□□□ 1.23
PDLIM2-221ENST00000622702 GRB14Q14449 540 aa22.76■■□□□ 1.23
PDLIM2-221ENST00000622702 MAP3K20Q9NYL2 800 aaKnown RBP22.76■■□□□ 1.23
PDLIM2-221ENST00000622702 PCDHA4Q9UN74 947 aa22.76■■□□□ 1.23
PDLIM2-221ENST00000622702 H3BQV1 296 aa22.75■■□□□ 1.23
PDLIM2-221ENST00000622702 PIK3CDO00329 1044 aa22.75■■□□□ 1.23
PDLIM2-221ENST00000622702 FCER1AP12319 257 aa22.75■■□□□ 1.23
PDLIM2-221ENST00000622702 RGS2P41220 211 aa22.75■■□□□ 1.23
PDLIM2-221ENST00000622702 GUCY1B3Q02153 619 aa22.75■■□□□ 1.23
PDLIM2-221ENST00000622702 IFFO2Q5TF58 517 aa22.75■■□□□ 1.23
PDLIM2-221ENST00000622702 BICD2Q8TD16 824 aa22.75■■□□□ 1.23
PDLIM2-221ENST00000622702 PXYLP1Q8TE99 480 aa22.75■■□□□ 1.23
PDLIM2-221ENST00000622702 ARMC5Q96C12 935 aa22.75■■□□□ 1.23
PDLIM2-221ENST00000622702 BIN2Q9UBW5 565 aaPredicted RBP22.75■■□□□ 1.23
PDLIM2-221ENST00000622702 MEIS2O14770 477 aa22.74■■□□□ 1.23
PDLIM2-221ENST00000622702 STX6O43752 255 aa22.74■■□□□ 1.23
PDLIM2-221ENST00000622702 XRCC5P13010 732 aaKnown RBP22.74■■□□□ 1.23
PDLIM2-221ENST00000622702 ADORA2AP29274 412 aa22.74■■□□□ 1.23
PDLIM2-221ENST00000622702 HSD17B4P51659 736 aa22.74■■□□□ 1.23
PDLIM2-221ENST00000622702 A1CFQ9NQ94 594 aaKnown RBP22.74■■□□□ 1.23
PDLIM2-221ENST00000622702 ZNFX1Q9P2E3 1918 aaKnown RBP22.74■■□□□ 1.23
PDLIM2-221ENST00000622702 GCOM1H8Y6P7 765 aaPredicted RBP22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 CFBP00751 764 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 POLR2MP0CAP2 368 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 SAFBQ15424 915 aaKnown RBP eCLIP22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 DPP9Q86TI2 863 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 BLIDQ8IZY5 108 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 ABRAQ8N0Z2 381 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 TBC1D5Q92609 795 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 MMP19Q99542 508 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 BRMS1Q9HCU9 246 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 PFASO15067 1338 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 ZNF236Q9UL36 1845 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 RBBP6Q7Z6E9 1792 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 M0R2N6 131 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 CAPN15O75808 1086 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 KRT2P35908 639 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 CLK2P49760 499 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 RPS6P62753 249 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 KCTD2Q14681 263 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 NSMFQ6X4W1 530 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 RNF207Q6ZRF8 634 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 DIS3L2Q8IYB7 885 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 REXO1Q8N1G1 1221 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 ZNF333Q96JL9 665 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 APBA2Q99767 749 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 CYP39A1Q9NYL5 469 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 MTMR6Q9Y217 621 aa22.73■■□□□ 1.23
PDLIM2-221ENST00000622702 VPS37CA5D8V6 355 aaPredicted RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms