RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 TXNRD1Q16881 649 aa14.21□□□□□ -0.13
MSH6-215ENST00000622629 GRAPLQ8TC17 118 aaPredicted RBP14.21□□□□□ -0.13
MSH6-215ENST00000622629 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.21□□□□□ -0.131e-6■■■■■ 44.2
MSH6-215ENST00000622629 ST7Q9NRC1 585 aa14.21□□□□□ -0.13
MSH6-215ENST00000622629 FRMD4BQ9Y2L6 1034 aa14.21□□□□□ -0.13
MSH6-215ENST00000622629 KNDC1Q76NI1 1749 aa14.21□□□□□ -0.13
MSH6-215ENST00000622629 NTSR2O95665 410 aa14.21□□□□□ -0.14
MSH6-215ENST00000622629 MRPS25P82663 173 aaKnown RBP14.21□□□□□ -0.14
MSH6-215ENST00000622629 ADAM9Q13443 819 aa14.21□□□□□ -0.14
MSH6-215ENST00000622629 TERF2Q15554 542 aa14.21□□□□□ -0.14
MSH6-215ENST00000622629 VWA3BQ502W6 1294 aa14.21□□□□□ -0.14
MSH6-215ENST00000622629 TC2NQ8N9U0 490 aa14.21□□□□□ -0.14
MSH6-215ENST00000622629 ARMCX3Q9UH62 379 aaPredicted RBP14.21□□□□□ -0.14
MSH6-215ENST00000622629 PEAK1Q9H792 1746 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 TTC26A0AVF1 554 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 PABPC4Q13310 644 aaKnown RBP eCLIP14.2□□□□□ -0.14
MSH6-215ENST00000622629 RPGRIP1Q96KN7 1286 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 TAOK3Q9H2K8 898 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 HDAC9Q9UKV0 1011 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 POTEMA6NI47 508 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 CETN2P41208 172 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 SEPT7Q16181 437 aaKnown RBP14.2□□□□□ -0.14
MSH6-215ENST00000622629 CERKLQ49MI3 558 aaPredicted RBP14.2□□□□□ -0.14
MSH6-215ENST00000622629 SLFN13Q68D06 897 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 SPICE1Q8N0Z3 855 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 CPXCR1Q8N123 301 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 MYO1AQ9UBC5 1043 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 HPSEQ9Y251 543 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 SRGAP2O75044 1071 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 BAG6P46379 1132 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 FXR1P51114 621 aaKnown RBP eCLIP14.2□□□□□ -0.142e-6■■■□□ 14.9
MSH6-215ENST00000622629 ZBED6P86452 979 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 NCAPHQ15003 741 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 RPS6KA1Q15418 735 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 MICALL1Q8N3F8 863 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 MAP3K14Q99558 947 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 NHEJ1Q9H9Q4 299 aaPredicted RBP14.2□□□□□ -0.14
MSH6-215ENST00000622629 SALL1Q9NSC2 1324 aa14.2□□□□□ -0.14
MSH6-215ENST00000622629 USP17L5A8MUK1 530 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 ACTN4O43707 911 aaKnown RBP14.19□□□□□ -0.14
MSH6-215ENST00000622629 GUCY2FP51841 1108 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 MICALCLQ6ZW33 695 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 UBLCP1Q8WVY7 318 aaPredicted RBP14.19□□□□□ -0.14
MSH6-215ENST00000622629 CEP95Q96GE4 821 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 MAGEF1Q9HAY2 307 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 ABCB6Q9NP58 842 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 XRCC5P13010 732 aaKnown RBP14.19□□□□□ -0.14
MSH6-215ENST00000622629 FOXP4Q8IVH2 680 aaPredicted RBP14.19□□□□□ -0.14
MSH6-215ENST00000622629 IFT20Q8IY31 132 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 GJA10Q969M2 543 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 HYOU1Q9Y4L1 999 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 CALUO43852 315 aaPredicted RBP14.19□□□□□ -0.14
MSH6-215ENST00000622629 ORC4O43929 436 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 TTLL1O95922 423 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 KLRK1P26718 216 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 TROAPQ12815 778 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 ASPRV1Q53RT3 343 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 WDR78Q5VTH9 848 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 ARHGEF1Q92888 912 aaKnown RBP14.19□□□□□ -0.14
MSH6-215ENST00000622629 THAP9Q9H5L6 903 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 TMEM260Q9NX78 707 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 SPATA31A5Q5VU36 1347 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 SPATA31A7Q8IWB4 1347 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 GOLGA6L7A0A1B0GV03 622 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 LGALS16A8MUM7 142 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 TADA3O75528 432 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 TNFAIP3P21580 790 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 EIF4A3P38919 411 aaKnown RBP14.19□□□□□ -0.14
MSH6-215ENST00000622629 FKBP3Q00688 224 aaKnown RBP14.19□□□□□ -0.14
MSH6-215ENST00000622629 ICA1Q05084 483 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 ARHGAP44Q17R89 818 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 CC2D1AQ6P1N0 951 aaPredicted RBP14.19□□□□□ -0.14
MSH6-215ENST00000622629 CHP1Q99653 195 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 CD209Q9NNX6 404 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 FAN1Q9Y2M0 1017 aa14.19□□□□□ -0.14
MSH6-215ENST00000622629 KDM3AQ9Y4C1 1321 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 A0A1B0GTH6 734 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 ARHGEF35A5YM69 484 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 MEIS1O00470 390 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 EXOC3O60645 756 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 TCP1P17987 556 aaKnown RBP14.18□□□□□ -0.14
MSH6-215ENST00000622629 EHHADHQ08426 723 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 MAN2A1Q16706 1144 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 HPS3Q969F9 1004 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 NDST4Q9H3R1 872 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 FGFR2P21802 821 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 GJC1P36383 396 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 RETREG2Q8NC44 543 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 ADD3Q9UEY8 706 aaKnown RBP14.18□□□□□ -0.14
MSH6-215ENST00000622629 NDUFAB1O14561 156 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 KCNK3O14649 394 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 FLOT1O75955 427 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 MYL1P05976 194 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 ABCB4P21439 1286 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 CACNB3P54284 484 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 NR1I3Q14994 352 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 C12orf60Q5U649 245 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 RAD9BQ6WBX8 426 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 PEX26Q7Z412 305 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 CCDC25Q86WR0 208 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms