RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 PDE8BO95263 885 aa9.08□□□□□ -0.96
SENP3-210ENST00000619785 PTPRAP18433 802 aa9.08□□□□□ -0.96
SENP3-210ENST00000619785 GTF2F1P35269 517 aaKnown RBP eCLIP9.08□□□□□ -0.96
SENP3-210ENST00000619785 POU4F2Q12837 409 aa9.08□□□□□ -0.96
SENP3-210ENST00000619785 ZNF394Q53GI3 561 aa9.08□□□□□ -0.96
SENP3-210ENST00000619785 PI16Q6UXB8 463 aa9.08□□□□□ -0.96
SENP3-210ENST00000619785 LRRC69Q6ZNQ3 347 aa9.08□□□□□ -0.96
SENP3-210ENST00000619785 PRICKLE2Q7Z3G6 844 aa9.08□□□□□ -0.96
SENP3-210ENST00000619785 SCYL3Q8IZE3 742 aa9.08□□□□□ -0.96
SENP3-210ENST00000619785 LINC00528Q8N1L1 170 aa9.08□□□□□ -0.96
SENP3-210ENST00000619785 EPS8L3Q8TE67 593 aaKnown RBP9.08□□□□□ -0.96
SENP3-210ENST00000619785 DNAJC2Q99543 621 aaKnown RBP9.08□□□□□ -0.96
SENP3-210ENST00000619785 CNNM1Q9NRU3 951 aa9.08□□□□□ -0.96
SENP3-210ENST00000619785 GGT7Q9UJ14 662 aa9.08□□□□□ -0.96
SENP3-210ENST00000619785 AGTPBP1Q9UPW5 1226 aa9.08□□□□□ -0.96
SENP3-210ENST00000619785 PCDHGB7Q9Y5F8 929 aa9.08□□□□□ -0.96
SENP3-210ENST00000619785 BDP1A6H8Y1 2624 aa9.07□□□□□ -0.96
SENP3-210ENST00000619785 TNFRSF10AO00220 468 aa9.07□□□□□ -0.96
SENP3-210ENST00000619785 GADD45BO75293 160 aaPredicted RBP9.07□□□□□ -0.96
SENP3-210ENST00000619785 ENTPD3O75355 529 aa9.07□□□□□ -0.96
SENP3-210ENST00000619785 VAMP4O75379 141 aa9.07□□□□□ -0.96
SENP3-210ENST00000619785 ALDH1L1O75891 902 aa9.07□□□□□ -0.96
SENP3-210ENST00000619785 XRCC5P13010 732 aaKnown RBP9.07□□□□□ -0.96
SENP3-210ENST00000619785 CTSOP43234 321 aaPredicted RBP9.07□□□□□ -0.96
SENP3-210ENST00000619785 ARID5AQ03989 594 aa9.07□□□□□ -0.96
SENP3-210ENST00000619785 NFIAQ12857 509 aa9.07□□□□□ -0.96
SENP3-210ENST00000619785 CDC42EP5Q6NZY7 148 aa9.07□□□□□ -0.96
SENP3-210ENST00000619785 MIGA2Q7L4E1 593 aa9.07□□□□□ -0.96
SENP3-210ENST00000619785 VPS37DQ86XT2 251 aa9.07□□□□□ -0.96
SENP3-210ENST00000619785 C7orf61Q8IZ16 206 aa9.07□□□□□ -0.96
SENP3-210ENST00000619785 PUS3Q9BZE2 481 aaKnown RBP9.07□□□□□ -0.96
SENP3-210ENST00000619785 SRCIN1Q9C0H9 1055 aa9.07□□□□□ -0.96
SENP3-210ENST00000619785 C11orf49Q9H6J7 331 aa9.07□□□□□ -0.96
SENP3-210ENST00000619785 MORF4L1Q9UBU8 362 aa9.07□□□□□ -0.96
SENP3-210ENST00000619785 DDX41Q9UJV9 622 aaKnown RBP9.07□□□□□ -0.96
SENP3-210ENST00000619785 DAGLAQ9Y4D2 1042 aa9.07□□□□□ -0.96
SENP3-210ENST00000619785 GAKO14976 1311 aa9.06□□□□□ -0.96
SENP3-210ENST00000619785 BMP2P12643 396 aa9.06□□□□□ -0.96
SENP3-210ENST00000619785 SMPD1P17405 629 aa9.06□□□□□ -0.96
SENP3-210ENST00000619785 IRS1P35568 1242 aa9.06□□□□□ -0.96
SENP3-210ENST00000619785 GCLCP48506 637 aaPredicted RBP9.06□□□□□ -0.96
SENP3-210ENST00000619785 WDR44Q5JSH3 913 aa9.06□□□□□ -0.96
SENP3-210ENST00000619785 DPH6Q7L8W6 267 aa9.06□□□□□ -0.96
SENP3-210ENST00000619785 LYSMD3Q7Z3D4 306 aa9.06□□□□□ -0.96
SENP3-210ENST00000619785 WDR66Q8TBY9 1149 aa9.06□□□□□ -0.96
SENP3-210ENST00000619785 DHX38Q92620 1227 aaKnown RBP9.06□□□□□ -0.96
SENP3-210ENST00000619785 TSR2Q969E8 191 aaKnown RBP9.06□□□□□ -0.96
SENP3-210ENST00000619785 COA7Q96BR5 231 aa9.06□□□□□ -0.96
SENP3-210ENST00000619785 OSBPL7Q9BZF2 842 aa9.06□□□□□ -0.96
SENP3-210ENST00000619785 NPHS2Q9NP85 383 aa9.06□□□□□ -0.96
SENP3-210ENST00000619785 V9GY48 417 aaPredicted RBP9.06□□□□□ -0.96
SENP3-210ENST00000619785 A0A1B0GTH6 734 aa9.05□□□□□ -0.96
SENP3-210ENST00000619785 CAPN5O15484 640 aaPredicted RBP9.05□□□□□ -0.96
SENP3-210ENST00000619785 CTNND1O60716 968 aaKnown RBP9.05□□□□□ -0.96
SENP3-210ENST00000619785 USP17L7P0C7H9 530 aa9.05□□□□□ -0.96
SENP3-210ENST00000619785 ATP4AP20648 1035 aa9.05□□□□□ -0.96
SENP3-210ENST00000619785 TRIP4Q15650 581 aaPredicted RBP9.05□□□□□ -0.96
SENP3-210ENST00000619785 CAVIN4Q5BKX8 364 aa9.05□□□□□ -0.96
SENP3-210ENST00000619785 TRIB2Q92519 343 aa9.05□□□□□ -0.96
SENP3-210ENST00000619785 USP6NLQ92738 828 aa9.05□□□□□ -0.96
SENP3-210ENST00000619785 SPATA32Q96LK8 384 aa9.05□□□□□ -0.96
SENP3-210ENST00000619785 UBE2OQ9C0C9 1292 aaKnown RBP9.05□□□□□ -0.96
SENP3-210ENST00000619785 TIMMDC1Q9NPL8 285 aa9.05□□□□□ -0.96
SENP3-210ENST00000619785 TOR4AQ9NXH8 423 aa9.05□□□□□ -0.96
SENP3-210ENST00000619785 ZMYND8Q9ULU4 1186 aaPredicted RBP9.05□□□□□ -0.96
SENP3-210ENST00000619785 ZHX2Q9Y6X8 837 aa9.05□□□□□ -0.96
SENP3-210ENST00000619785 PDS5AQ29RF7 1337 aaKnown RBP9.05□□□□□ -0.96
SENP3-210ENST00000619785 GDF9O60383 454 aa9.04□□□□□ -0.96
SENP3-210ENST00000619785 XYLBO75191 536 aa9.04□□□□□ -0.96
SENP3-210ENST00000619785 MEI1Q5TIA1 1274 aa9.04□□□□□ -0.96
SENP3-210ENST00000619785 SPNS2Q8IVW8 549 aa9.04□□□□□ -0.96
SENP3-210ENST00000619785 ANKRD44Q8N8A2 993 aa9.04□□□□□ -0.96
SENP3-210ENST00000619785 HPS1Q92902 700 aa9.04□□□□□ -0.96
SENP3-210ENST00000619785 PMEPA1Q969W9 287 aa9.04□□□□□ -0.96
SENP3-210ENST00000619785 CEP63Q96MT8 703 aa9.04□□□□□ -0.96
SENP3-210ENST00000619785 PRKRIP1Q9H875 184 aaPredicted RBP9.04□□□□□ -0.96
SENP3-210ENST00000619785 PPP4R2Q9NY27 417 aa9.04□□□□□ -0.96
SENP3-210ENST00000619785 TMEM63CQ9P1W3 806 aa9.04□□□□□ -0.96
SENP3-210ENST00000619785 KCNMB2Q9Y691 235 aa9.04□□□□□ -0.96
SENP3-210ENST00000619785 FANCIQ9NVI1 1328 aa9.04□□□□□ -0.96
SENP3-210ENST00000619785 PARP14Q460N5 1801 aa9.03□□□□□ -0.96
SENP3-210ENST00000619785 A0A0G2JMZ2 1700 aa9.03□□□□□ -0.96
SENP3-210ENST00000619785 TMEM265A0A087WTH1 108 aa9.03□□□□□ -0.96
SENP3-210ENST00000619785 F6X3S4 739 aa9.03□□□□□ -0.96
SENP3-210ENST00000619785 PLIN1O60240 522 aa9.03□□□□□ -0.96
SENP3-210ENST00000619785 POLR3DP05423 398 aaPredicted RBP9.03□□□□□ -0.96
SENP3-210ENST00000619785 SYN1P17600 705 aa9.03□□□□□ -0.96
SENP3-210ENST00000619785 ST13P50502 369 aaKnown RBP9.03□□□□□ -0.96
SENP3-210ENST00000619785 RACK1P63244 317 aaKnown RBP9.03□□□□□ -0.96
SENP3-210ENST00000619785 PUM3Q15397 648 aaKnown RBP9.03□□□□□ -0.96
SENP3-210ENST00000619785 LRRC24Q50LG9 513 aa9.03□□□□□ -0.96
SENP3-210ENST00000619785 TAF7LQ5H9L4 462 aa9.03□□□□□ -0.96
SENP3-210ENST00000619785 TREML2Q5T2D2 321 aa9.03□□□□□ -0.96
SENP3-210ENST00000619785 C6orf118Q5T5N4 469 aa9.03□□□□□ -0.96
SENP3-210ENST00000619785 NXPE4Q6UWF7 544 aa9.03□□□□□ -0.96
SENP3-210ENST00000619785 ZFPM1Q8IX07 1006 aa9.03□□□□□ -0.96
SENP3-210ENST00000619785 ANKRD13CQ8N6S4 541 aa9.03□□□□□ -0.96
SENP3-210ENST00000619785 RNF217Q8TC41 542 aa9.03□□□□□ -0.96
SENP3-210ENST00000619785 SUCLG2Q96I99 432 aa9.03□□□□□ -0.96
SENP3-210ENST00000619785 BCO2Q9BYV7 579 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms