RNA–Protein interactions for RNA: ENST00000619151.4

BRF1-221, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-221ENST00000619151 CCDC174Q6PII3 467 aa31.58■■■□□ 2.65
BRF1-221ENST00000619151 DTHD1Q6ZMT9 781 aa31.58■■■□□ 2.65
BRF1-221ENST00000619151 FBXO28Q9NVF7 368 aa31.58■■■□□ 2.65
BRF1-221ENST00000619151 HOOK1Q9UJC3 728 aaKnown RBP31.58■■■□□ 2.65
BRF1-221ENST00000619151 ABCB11O95342 1321 aa31.58■■■□□ 2.65
BRF1-221ENST00000619151 GCFC2P16383 781 aaKnown RBP31.57■■■□□ 2.64
BRF1-221ENST00000619151 APLP1P51693 650 aa31.57■■■□□ 2.64
BRF1-221ENST00000619151 SPECC1Q5M775 1068 aa31.57■■■□□ 2.64
BRF1-221ENST00000619151 ELOA2Q8IYF1 753 aaPredicted RBP31.57■■■□□ 2.64
BRF1-221ENST00000619151 HHIPL1Q96JK4 782 aa31.57■■■□□ 2.64
BRF1-221ENST00000619151 RBSNQ9H1K0 784 aa31.57■■■□□ 2.64
BRF1-221ENST00000619151 AFG3L2Q9Y4W6 797 aa31.57■■■□□ 2.64
BRF1-221ENST00000619151 OR52Z1P0C646 297 aa31.56■■■□□ 2.64
BRF1-221ENST00000619151 TYRO3Q06418 890 aa31.56■■■□□ 2.64
BRF1-221ENST00000619151 ANO3Q9BYT9 981 aa31.56■■■□□ 2.64
BRF1-221ENST00000619151 RPAP3Q9H6T3 665 aaPredicted RBP31.56■■■□□ 2.64
BRF1-221ENST00000619151 TMOD4Q9NZQ9 345 aa31.56■■■□□ 2.64
BRF1-221ENST00000619151 USP17L15C9J2P7 530 aa31.55■■■□□ 2.64
BRF1-221ENST00000619151 USP17L13C9JLJ4 530 aa31.55■■■□□ 2.64
BRF1-221ENST00000619151 USP17L11C9JVI0 530 aa31.55■■■□□ 2.64
BRF1-221ENST00000619151 USP17L18D6R9N7 530 aa31.55■■■□□ 2.64
BRF1-221ENST00000619151 USP17L22D6RA61 530 aa31.55■■■□□ 2.64
BRF1-221ENST00000619151 USP17L17D6RBQ6 530 aa31.55■■■□□ 2.64
BRF1-221ENST00000619151 USP17L19D6RCP7 530 aa31.55■■■□□ 2.64
BRF1-221ENST00000619151 USP17L20D6RJB6 530 aa31.55■■■□□ 2.64
BRF1-221ENST00000619151 PIK3CDO00329 1044 aa31.55■■■□□ 2.64
BRF1-221ENST00000619151 FLOT1O75955 427 aa31.55■■■□□ 2.64
BRF1-221ENST00000619151 TXLNAP40222 546 aa31.55■■■□□ 2.64
BRF1-221ENST00000619151 USP17L24Q0WX57 530 aa31.55■■■□□ 2.64
BRF1-221ENST00000619151 PPP4R3AQ6IN85 833 aa31.55■■■□□ 2.64
BRF1-221ENST00000619151 USP17L6PQ6QN14 398 aa31.55■■■□□ 2.64
BRF1-221ENST00000619151 SAMD1Q6SPF0 538 aaPredicted RBP31.55■■■□□ 2.64
BRF1-221ENST00000619151 CNNM3Q8NE01 707 aa31.55■■■□□ 2.64
BRF1-221ENST00000619151 PHIPQ8WWQ0 1821 aa31.55■■■□□ 2.64
BRF1-221ENST00000619151 SPDYE3A6NKU9 549 aa31.54■■■□□ 2.64
BRF1-221ENST00000619151 MEIS2O14770 477 aa31.54■■■□□ 2.64
BRF1-221ENST00000619151 KRBA2Q6ZNG9 492 aa31.54■■■□□ 2.64
BRF1-221ENST00000619151 SYMPKQ92797 1274 aaKnown RBP31.54■■■□□ 2.64
BRF1-221ENST00000619151 CREBZFQ9NS37 354 aa31.54■■■□□ 2.64
BRF1-221ENST00000619151 PPP1R9AQ9ULJ8 1098 aa31.54■■■□□ 2.64
BRF1-221ENST00000619151 CTDP1Q9Y5B0 961 aaPredicted RBP31.54■■■□□ 2.64
BRF1-221ENST00000619151 ICAM1P05362 532 aa31.54■■■□□ 2.64
BRF1-221ENST00000619151 KANK3Q6NY19 840 aa31.54■■■□□ 2.64
BRF1-221ENST00000619151 CNKSR2Q8WXI2 1034 aa31.54■■■□□ 2.64
BRF1-221ENST00000619151 TMEM60Q9H2L4 133 aa31.54■■■□□ 2.64
BRF1-221ENST00000619151 USP25Q9UHP3 1055 aa31.54■■■□□ 2.64
BRF1-221ENST00000619151 XRCC6P12956 609 aaKnown RBP eCLIP31.53■■■□□ 2.642e-6■■□□□ 12.3
BRF1-221ENST00000619151 USP11P51784 963 aa31.53■■■□□ 2.64
BRF1-221ENST00000619151 PPIL2Q13356 520 aa31.53■■■□□ 2.64
BRF1-221ENST00000619151 OPTNQ96CV9 577 aa31.53■■■□□ 2.64
BRF1-221ENST00000619151 POLR2DO15514 142 aaKnown RBP31.52■■■□□ 2.64
BRF1-221ENST00000619151 CAVIN2O95810 425 aa31.52■■■□□ 2.64
BRF1-221ENST00000619151 ZRSR1Q15695 479 aaKnown RBP31.52■■■□□ 2.64
BRF1-221ENST00000619151 RGMBQ6NW40 437 aa31.52■■■□□ 2.64
BRF1-221ENST00000619151 AK8Q96MA6 479 aa31.52■■■□□ 2.64
BRF1-221ENST00000619151 ABT1Q9ULW3 272 aaKnown RBP31.52■■■□□ 2.64
BRF1-221ENST00000619151 ZBED4O75132 1171 aa31.51■■■□□ 2.63
BRF1-221ENST00000619151 HMGCS2P54868 508 aa31.51■■■□□ 2.63
BRF1-221ENST00000619151 MOXD1Q6UVY6 613 aa31.51■■■□□ 2.63
BRF1-221ENST00000619151 OTUD5Q96G74 571 aa31.51■■■□□ 2.63
BRF1-221ENST00000619151 EHMT1Q9H9B1 1298 aa31.51■■■□□ 2.63
BRF1-221ENST00000619151 SLC38A10Q9HBR0 1119 aa31.51■■■□□ 2.63
BRF1-221ENST00000619151 KIAA1468Q9P260 1216 aa31.51■■■□□ 2.63
BRF1-221ENST00000619151 CCPG1Q9ULG6 757 aa31.51■■■□□ 2.63
BRF1-221ENST00000619151 KCNH4Q9UQ05 1017 aa31.51■■■□□ 2.63
BRF1-221ENST00000619151 GCOM1H8Y6P7 765 aaPredicted RBP31.5■■■□□ 2.63
BRF1-221ENST00000619151 CXCL11O14625 94 aa31.5■■■□□ 2.63
BRF1-221ENST00000619151 POLR2MP0CAP2 368 aa31.5■■■□□ 2.63
BRF1-221ENST00000619151 GJA5P36382 358 aa31.5■■■□□ 2.63
BRF1-221ENST00000619151 CALCRLQ16602 461 aa31.5■■■□□ 2.63
BRF1-221ENST00000619151 STX1AQ16623 288 aa31.5■■■□□ 2.63
BRF1-221ENST00000619151 SH3D19Q5HYK7 790 aa31.5■■■□□ 2.63
BRF1-221ENST00000619151 ANP32BQ92688 251 aaKnown RBP31.5■■■□□ 2.63
BRF1-221ENST00000619151 EPSTI1Q96J88 318 aa31.5■■■□□ 2.63
BRF1-221ENST00000619151 WNK4Q96J92 1243 aa31.5■■■□□ 2.63
BRF1-221ENST00000619151 IRF6O14896 467 aa31.49■■■□□ 2.63
BRF1-221ENST00000619151 DGKZQ13574 1117 aa31.49■■■□□ 2.63
BRF1-221ENST00000619151 IL17AQ16552 155 aa31.49■■■□□ 2.63
BRF1-221ENST00000619151 LONRF3Q496Y0 759 aa31.49■■■□□ 2.63
BRF1-221ENST00000619151 OPLAHO14841 1288 aa31.49■■■□□ 2.63
BRF1-221ENST00000619151 ZBTB48P10074 688 aaPredicted RBP31.49■■■□□ 2.63
BRF1-221ENST00000619151 ZNF157P51786 506 aaPredicted RBP31.49■■■□□ 2.63
BRF1-221ENST00000619151 TMEM266Q2M3C6 531 aa31.49■■■□□ 2.63
BRF1-221ENST00000619151 SPRYD7Q5W111 196 aa31.49■■■□□ 2.63
BRF1-221ENST00000619151 USP49Q70CQ1 688 aa31.49■■■□□ 2.63
BRF1-221ENST00000619151 POTEDQ86YR6 584 aa31.49■■■□□ 2.63
BRF1-221ENST00000619151 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.49■■■□□ 2.63
BRF1-221ENST00000619151 DDX25Q9UHL0 483 aaKnown RBP31.49■■■□□ 2.63
BRF1-221ENST00000619151 TDP2O95551 362 aa31.48■■■□□ 2.63
BRF1-221ENST00000619151 CEP57L1Q8IYX8 460 aa31.48■■■□□ 2.63
BRF1-221ENST00000619151 RNF214Q8ND24 703 aa31.48■■■□□ 2.63
BRF1-221ENST00000619151 RAB34Q9BZG1 259 aa31.48■■■□□ 2.63
BRF1-221ENST00000619151 ANO10Q9NW15 660 aa31.48■■■□□ 2.63
BRF1-221ENST00000619151 MYH7BA7E2Y1 1941 aa31.48■■■□□ 2.63
BRF1-221ENST00000619151 SREBF1P36956 1147 aa31.47■■■□□ 2.63
BRF1-221ENST00000619151 UVSSAQ2YD98 709 aa31.47■■■□□ 2.63
BRF1-221ENST00000619151 MCF2L2Q86YR7 1114 aa31.47■■■□□ 2.63
BRF1-221ENST00000619151 RASAL3Q86YV0 1011 aa31.47■■■□□ 2.63
BRF1-221ENST00000619151 PDILTQ8N807 584 aa31.47■■■□□ 2.63
BRF1-221ENST00000619151 ZNF536O15090 1300 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms