RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 RBM47A0AV96 593 aaKnown RBP9.58□□□□□ -0.88
NEK3-209ENST00000618856 ASB14A6NK59 587 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 PLEKHA8P1O95397 391 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 SEC24BO95487 1268 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 TFRCP02786 760 aaKnown RBP9.58□□□□□ -0.88
NEK3-209ENST00000618856 PSMA5P28066 241 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 SLC4A3P48751 1232 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 ALDH5A1P51649 535 aaPredicted RBP9.58□□□□□ -0.88
NEK3-209ENST00000618856 TRAF1Q13077 416 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 ACVR2BQ13705 512 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 TOB2Q14106 344 aaPredicted RBP9.58□□□□□ -0.88
NEK3-209ENST00000618856 PPP2R5BQ15173 497 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 C8orf34Q49A92 452 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 NFXL1Q6ZNB6 911 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 ARMCX2Q7L311 632 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 MCF2L2Q86YR7 1114 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 DNERQ8NFT8 737 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 SYTL5Q8TDW5 730 aaPredicted RBP9.58□□□□□ -0.88
NEK3-209ENST00000618856 NUP133Q8WUM0 1156 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 TBC1D5Q92609 795 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 TCEANC2Q96MN5 208 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 PURBQ96QR8 312 aaKnown RBP9.58□□□□□ -0.88
NEK3-209ENST00000618856 VAT1LQ9HCJ6 419 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 RBM28Q9NW13 759 aaKnown RBP9.58□□□□□ -0.88
NEK3-209ENST00000618856 COL20A1Q9P218 1284 aa9.58□□□□□ -0.88
NEK3-209ENST00000618856 ADD3Q9UEY8 706 aaKnown RBP9.58□□□□□ -0.88
NEK3-209ENST00000618856 MRPL11Q9Y3B7 192 aaKnown RBP9.58□□□□□ -0.88
NEK3-209ENST00000618856 DNM1LO00429 736 aa9.57□□□□□ -0.88
NEK3-209ENST00000618856 ZBTB43O43298 467 aa9.57□□□□□ -0.88
NEK3-209ENST00000618856 ADCY6O43306 1168 aa9.57□□□□□ -0.88
NEK3-209ENST00000618856 ADAMTS4O75173 837 aa9.57□□□□□ -0.88
NEK3-209ENST00000618856 FARP2O94887 1054 aaPredicted RBP9.57□□□□□ -0.88
NEK3-209ENST00000618856 AKR1A1P14550 325 aa9.57□□□□□ -0.88
NEK3-209ENST00000618856 RXRAP19793 462 aa9.57□□□□□ -0.88
NEK3-209ENST00000618856 CASTP20810 708 aaKnown RBP9.57□□□□□ -0.88
NEK3-209ENST00000618856 USH1GQ495M9 461 aa9.57□□□□□ -0.88
NEK3-209ENST00000618856 CCSAPQ6IQ19 270 aaPredicted RBP9.57□□□□□ -0.88
NEK3-209ENST00000618856 TAPT1Q6NXT6 567 aa9.57□□□□□ -0.88
NEK3-209ENST00000618856 NSMFQ6X4W1 530 aa9.57□□□□□ -0.88
NEK3-209ENST00000618856 Q6ZUG5 572 aa9.57□□□□□ -0.88
NEK3-209ENST00000618856 TEX2Q8IWB9 1127 aa9.57□□□□□ -0.88
NEK3-209ENST00000618856 KLHDC9Q8NEP7 349 aa9.57□□□□□ -0.88
NEK3-209ENST00000618856 CNPY2Q9Y2B0 182 aa9.57□□□□□ -0.88
NEK3-209ENST00000618856 PCDHA1Q9Y5I3 950 aa9.57□□□□□ -0.88
NEK3-209ENST00000618856 FRMPD4Q14CM0 1322 aa9.56□□□□□ -0.88
NEK3-209ENST00000618856 CNTNAP5Q8WYK1 1306 aa9.56□□□□□ -0.88
NEK3-209ENST00000618856 MYH6P13533 1939 aa9.56□□□□□ -0.88
NEK3-209ENST00000618856 KLF18A0A0U1RQI7 1052 aa9.56□□□□□ -0.88
NEK3-209ENST00000618856 PIK3CDO00329 1044 aa9.56□□□□□ -0.88
NEK3-209ENST00000618856 CTAGE5O15320 804 aa9.56□□□□□ -0.88
NEK3-209ENST00000618856 DUSP11O75319 330 aaKnown RBP9.56□□□□□ -0.88
NEK3-209ENST00000618856 CST5P28325 142 aaPredicted RBP9.56□□□□□ -0.88
NEK3-209ENST00000618856 CDC27P30260 824 aa9.56□□□□□ -0.88
NEK3-209ENST00000618856 NTRK3Q16288 839 aa9.56□□□□□ -0.88
NEK3-209ENST00000618856 CCDC144BQ3MJ40 725 aa9.56□□□□□ -0.88
NEK3-209ENST00000618856 MICU3Q86XE3 530 aa9.56□□□□□ -0.88
NEK3-209ENST00000618856 DIS3LQ8TF46 1054 aaKnown RBP9.56□□□□□ -0.88
NEK3-209ENST00000618856 BRF1Q92994 677 aa9.56□□□□□ -0.88
NEK3-209ENST00000618856 RRP36Q96EU6 259 aaKnown RBP9.56□□□□□ -0.88
NEK3-209ENST00000618856 PAWRQ96IZ0 340 aaKnown RBP9.56□□□□□ -0.88
NEK3-209ENST00000618856 IWS1Q96ST2 819 aa9.56□□□□□ -0.88
NEK3-209ENST00000618856 UPF3AQ9H1J1 476 aaKnown RBP9.56□□□□□ -0.88
NEK3-209ENST00000618856 VTA1Q9NP79 307 aa9.56□□□□□ -0.88
NEK3-209ENST00000618856 FAM184BQ9ULE4 1060 aa9.56□□□□□ -0.88
NEK3-209ENST00000618856 GNEQ9Y223 722 aaKnown RBP9.56□□□□□ -0.88
NEK3-209ENST00000618856 Q9Y3F1 56 aa9.56□□□□□ -0.88
NEK3-209ENST00000618856 CYP46A1Q9Y6A2 500 aa9.56□□□□□ -0.88
NEK3-209ENST00000618856 MCM3APO60318 1980 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 PDE4DIPQ5VU43 2346 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 PTPDC1A2A3K4 754 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 MEIS2O14770 477 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 DHX16O60231 1041 aaKnown RBP9.55□□□□□ -0.88
NEK3-209ENST00000618856 CALML3P27482 149 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 CNGA1P29973 690 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 PDIA3P30101 505 aaKnown RBP9.55□□□□□ -0.88
NEK3-209ENST00000618856 ADD1P35611 737 aaKnown RBP9.55□□□□□ -0.88
NEK3-209ENST00000618856 GJA9P57773 515 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 APOBRQ0VD83 1088 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 RTN1Q16799 776 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 C1orf53Q5VUE5 145 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 IQSEC1Q6DN90 963 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 CHRDL2Q6WN34 429 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 SYNE3Q6ZMZ3 975 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 NECAB2Q7Z6G3 386 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 HOMER1Q86YM7 354 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 RAB11FIP4Q86YS3 637 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 CMTR1Q8N1G2 835 aaKnown RBP9.55□□□□□ -0.88
NEK3-209ENST00000618856 ARRDC4Q8NCT1 418 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 ZNF274Q96GC6 653 aaPredicted RBP9.55□□□□□ -0.88
NEK3-209ENST00000618856 TAAR1Q96RJ0 339 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 C11orf49Q9H6J7 331 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 DDX49Q9Y6V7 483 aaKnown RBP9.55□□□□□ -0.88
NEK3-209ENST00000618856 BAZ2BQ9UIF8 2168 aaKnown RBP9.55□□□□□ -0.88
NEK3-209ENST00000618856 RANBP2P49792 3224 aaKnown RBP9.55□□□□□ -0.88
NEK3-209ENST00000618856 SYNRGQ9UMZ2 1314 aa9.55□□□□□ -0.88
NEK3-209ENST00000618856 CCDC196A0A1B0GTZ2 297 aa9.54□□□□□ -0.88
NEK3-209ENST00000618856 hCG_1984214I3L0E3 225 aa9.54□□□□□ -0.88
NEK3-209ENST00000618856 RARBP10826 455 aa9.54□□□□□ -0.88
NEK3-209ENST00000618856 SMPD1P17405 629 aa9.54□□□□□ -0.88
NEK3-209ENST00000618856 SNX17Q15036 470 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms