RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 RPS6KA2Q15349 733 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 TCP11X2Q5H9J9 407 aa11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 ZCCHC17Q9NP64 241 aaKnown RBP11.63□□□□□ -0.55
CLTCL1-209ENST00000617103 MAGI2Q86UL8 1455 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 WDR7Q9Y4E6 1490 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 KAT6BQ8WYB5 2073 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 RASGRF2O14827 1237 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 MGEA5O60502 916 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 FTCDO95954 541 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 EIF4A3P38919 411 aaKnown RBP11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 FKBP3Q00688 224 aaKnown RBP11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 CUL1Q13616 776 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 MESDQ14696 234 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 GLE1Q53GS7 698 aaKnown RBP11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 TBC1D1Q86TI0 1168 aaPredicted RBP11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 KSR1Q8IVT5 923 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 TRIM6Q9C030 488 aaPredicted RBP11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 PTPN22Q9Y2R2 807 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 PEG3Q9GZU2 1588 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 DDX39AO00148 427 aaKnown RBP11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 RIMBP2O15034 1052 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 SLC7A5Q01650 507 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 CYP27A1Q02318 531 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 NECTIN1Q15223 517 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 BSPRYQ5W0U4 402 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 TRIM42Q8IWZ5 723 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 RNF34Q969K3 372 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 HVCN1Q96D96 273 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 SAAL1Q96ER3 474 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 AK8Q96MA6 479 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 RTCBQ9Y3I0 505 aaKnown RBP11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 PCP11498 1178 aaKnown RBP11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 PPM1FP49593 454 aaPredicted RBP11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 TCIRG1Q13488 830 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 MAPKAPK5Q8IW41 473 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 FAM178BQ8IXR5 827 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 FMO2Q99518 471 aa11.62□□□□□ -0.55
CLTCL1-209ENST00000617103 KLRF2D3W0D1 207 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 SPECC1L-ADORA2AF8WAN1 911 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 YWHAEP62258 255 aaKnown RBP11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 NXNQ6DKJ4 435 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 CDAN1Q8IWY9 1227 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 PPM1KQ8N3J5 372 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 TSC22D3Q99576 134 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 THAP9Q9H5L6 903 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 MYO1FO00160 1098 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 SEMA3EO15041 775 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 GAS7O60861 476 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 CFBP00751 764 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 INHBAP08476 426 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 C10orf76Q5T2E6 689 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 TMTC3Q6ZXV5 915 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 SLFN12Q8IYM2 578 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 VTI1AQ96AJ9 217 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 HAUS1Q96CS2 278 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 GPR108Q9NPR9 543 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 C1orf112Q9NSG2 853 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 NFU1Q9UMS0 254 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 PCDHA13Q9Y5I0 950 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 MAP3K7O43318 606 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 CCNE1P24864 410 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 RCN2Q14257 317 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 SEPT2Q15019 361 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 ARHGEF25Q86VW2 580 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 CCDC125Q86Z20 511 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 GPKOWQ92917 476 aaPredicted RBP eCLIP11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 SRPRBQ9Y5M8 271 aaKnown RBP11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 ABCC12Q96J65 1359 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 UFL1O94874 794 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 ECEL1O95672 775 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 C6orf118Q5T5N4 469 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 LARP4BQ92615 738 aaKnown RBP11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 TRPC6Q9Y210 931 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 AFG3L2Q9Y4W6 797 aa11.61□□□□□ -0.55
CLTCL1-209ENST00000617103 MMP1P03956 469 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 SLCO1A2P46721 670 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 KIF11P52732 1056 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 CCDC144BQ3MJ40 725 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 USH1GQ495M9 461 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 TGFBRAP1Q8WUH2 860 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 PSTPIP2Q9H939 334 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 PLXNC1O60486 1568 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 MAST3O60307 1309 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 IFNAR1P17181 557 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 NR2F2P24468 414 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 ESRRGP62508 458 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 WDR62O43379 1518 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 ZNF608Q9ULD9 1512 aaPredicted RBP11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 ANO9A1A5B4 782 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 NSFP46459 744 aaKnown RBP11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 YWHAGP61981 247 aaKnown RBP eCLIP11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 AOC3Q16853 763 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 PRR16Q569H4 304 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 TMCO4Q5TGY1 634 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 TOGARAM2Q6ZUX3 1019 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 SDR42E1Q8WUS8 393 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 GJA10Q969M2 543 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 TEKT1Q969V4 418 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 TLR7Q9NYK1 1049 aaKnown RBP11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 TFCP2L1Q9NZI6 479 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms