RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 F5H6K3 240 aa17.54■□□□□ 0.4
SEMA3B-212ENST00000616701 KLRC3Q07444 240 aa17.54■□□□□ 0.4
SEMA3B-212ENST00000616701 DLGAP5Q15398 846 aa17.54■□□□□ 0.4
SEMA3B-212ENST00000616701 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.54■□□□□ 0.43e-7■■■■□ 20.8
SEMA3B-212ENST00000616701 ESYT2A0FGR8 921 aa17.54■□□□□ 0.4
SEMA3B-212ENST00000616701 CCDC66A2RUB6 948 aa17.54■□□□□ 0.4
SEMA3B-212ENST00000616701 SPDYE2BA6NHP3 402 aa17.54■□□□□ 0.4
SEMA3B-212ENST00000616701 RPN1P04843 607 aaKnown RBP17.54■□□□□ 0.4
SEMA3B-212ENST00000616701 SPDYE6P0CI01 402 aa17.54■□□□□ 0.4
SEMA3B-212ENST00000616701 USH1GQ495M9 461 aa17.54■□□□□ 0.4
SEMA3B-212ENST00000616701 MIGA2Q7L4E1 593 aa17.54■□□□□ 0.4
SEMA3B-212ENST00000616701 RTKN2Q8IZC4 609 aa17.54■□□□□ 0.4
SEMA3B-212ENST00000616701 CBFA2T2O43439 604 aa17.53■□□□□ 0.4
SEMA3B-212ENST00000616701 ZNF18P17022 549 aa17.53■□□□□ 0.4
SEMA3B-212ENST00000616701 SFPQP23246 707 aaKnown RBP eCLIP17.53■□□□□ 0.4
SEMA3B-212ENST00000616701 CDC37Q16543 378 aaPredicted RBP17.53■□□□□ 0.4
SEMA3B-212ENST00000616701 RBM26Q5T8P6 1007 aaKnown RBP17.53■□□□□ 0.4
SEMA3B-212ENST00000616701 TMEM179Q6ZVK1 233 aa17.53■□□□□ 0.4
SEMA3B-212ENST00000616701 TMOD2Q9NZR1 351 aa17.53■□□□□ 0.4
SEMA3B-212ENST00000616701 NYAP2Q9P242 653 aa17.53■□□□□ 0.4
SEMA3B-212ENST00000616701 A0A1W2PRG0 241 aa17.53■□□□□ 0.4
SEMA3B-212ENST00000616701 NDUFB10O96000 172 aa17.53■□□□□ 0.4
SEMA3B-212ENST00000616701 ECE1P42892 770 aa17.53■□□□□ 0.4
SEMA3B-212ENST00000616701 CALCRLQ16602 461 aa17.53■□□□□ 0.4
SEMA3B-212ENST00000616701 PSTPIP2Q9H939 334 aa17.53■□□□□ 0.4
SEMA3B-212ENST00000616701 ZNF70Q9UC06 446 aaPredicted RBP17.53■□□□□ 0.4
SEMA3B-212ENST00000616701 PCDHA1Q9Y5I3 950 aa17.53■□□□□ 0.4
SEMA3B-212ENST00000616701 GSDMDP57764 484 aa17.52■□□□□ 0.4
SEMA3B-212ENST00000616701 OGFOD1Q8N543 542 aa17.52■□□□□ 0.4
SEMA3B-212ENST00000616701 TMEM39BQ9GZU3 492 aa17.52■□□□□ 0.4
SEMA3B-212ENST00000616701 RIC8AQ9NPQ8 531 aa17.52■□□□□ 0.4
SEMA3B-212ENST00000616701 IMPACTQ9P2X3 320 aa17.52■□□□□ 0.4
SEMA3B-212ENST00000616701 GREB1LQ9C091 1923 aaPredicted RBP17.52■□□□□ 0.4
SEMA3B-212ENST00000616701 POTEMA6NI47 508 aa17.52■□□□□ 0.4
SEMA3B-212ENST00000616701 VSTM4Q8IW00 320 aa17.52■□□□□ 0.4
SEMA3B-212ENST00000616701 BANK1Q8NDB2 785 aa17.52■□□□□ 0.4
SEMA3B-212ENST00000616701 CUL5Q93034 780 aa17.52■□□□□ 0.4
SEMA3B-212ENST00000616701 ENTPD3O75355 529 aa17.52■□□□□ 0.39
SEMA3B-212ENST00000616701 ERCC5P28715 1186 aaPredicted RBP17.52■□□□□ 0.39
SEMA3B-212ENST00000616701 ZYXQ15942 572 aaKnown RBP17.52■□□□□ 0.39
SEMA3B-212ENST00000616701 CCDC84Q86UT8 332 aaPredicted RBP17.52■□□□□ 0.39
SEMA3B-212ENST00000616701 MKL1Q969V6 931 aa17.52■□□□□ 0.39
SEMA3B-212ENST00000616701 LAD1O00515 517 aa17.51■□□□□ 0.39
SEMA3B-212ENST00000616701 TEX33O43247 280 aa17.51■□□□□ 0.39
SEMA3B-212ENST00000616701 VIL1P09327 827 aaKnown RBP17.51■□□□□ 0.39
SEMA3B-212ENST00000616701 PRPHP41219 470 aa17.51■□□□□ 0.39
SEMA3B-212ENST00000616701 ACER1Q8TDN7 264 aa17.51■□□□□ 0.39
SEMA3B-212ENST00000616701 CCSER1Q9C0I3 900 aa17.51■□□□□ 0.39
SEMA3B-212ENST00000616701 hCG_1984214I3L0E3 225 aa17.51■□□□□ 0.39
SEMA3B-212ENST00000616701 SPATA1Q5VX52 437 aa17.51■□□□□ 0.39
SEMA3B-212ENST00000616701 ZNF713Q8N859 430 aaPredicted RBP17.51■□□□□ 0.39
SEMA3B-212ENST00000616701 ZNF592Q92610 1267 aa17.51■□□□□ 0.39
SEMA3B-212ENST00000616701 PSMD1Q99460 953 aa17.51■□□□□ 0.39
SEMA3B-212ENST00000616701 PYM1Q9BRP8 204 aaKnown RBP17.51■□□□□ 0.39
SEMA3B-212ENST00000616701 MMTAG2Q9BU76 263 aaKnown RBP17.51■□□□□ 0.39
SEMA3B-212ENST00000616701 TRIM49BA6NDI0 452 aa17.5■□□□□ 0.39
SEMA3B-212ENST00000616701 PRCPP42785 496 aa17.5■□□□□ 0.39
SEMA3B-212ENST00000616701 KMT5BQ4FZB7 885 aa17.5■□□□□ 0.39
SEMA3B-212ENST00000616701 NIM1KQ8IY84 436 aa17.5■□□□□ 0.39
SEMA3B-212ENST00000616701 DCAF4Q8WV16 495 aa17.5■□□□□ 0.39
SEMA3B-212ENST00000616701 GMLQ99445 158 aa17.5■□□□□ 0.39
SEMA3B-212ENST00000616701 NUDT12Q9BQG2 462 aa17.5■□□□□ 0.39
SEMA3B-212ENST00000616701 HDAC9Q9UKV0 1011 aa17.5■□□□□ 0.39
SEMA3B-212ENST00000616701 NELFBQ8WX92 580 aa17.5■□□□□ 0.39
SEMA3B-212ENST00000616701 MTMR8Q96EF0 704 aa17.5■□□□□ 0.39
SEMA3B-212ENST00000616701 EEF2KMTQ96G04 330 aa17.5■□□□□ 0.39
SEMA3B-212ENST00000616701 TNNT1P13805 278 aa17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 CCT6AP40227 531 aaKnown RBP17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 MRPL12P52815 198 aaKnown RBP17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 KIAA1755Q5JYT7 1200 aa17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 FAM177A1Q8N128 213 aaPredicted RBP17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 CCDC150Q8NCX0 1101 aa17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 HPS3Q969F9 1004 aa17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 LRWD1Q9UFC0 647 aa17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 MARCH6O60337 910 aa17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 ADKP55263 362 aaKnown RBP17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 CXCL9Q07325 125 aa17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 NBPF9Q3BBW0 867 aa17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 ZNF658Q5TYW1 1059 aaPredicted RBP17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 MTMR9Q96QG7 549 aa17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 CLK2P49760 499 aaKnown RBP17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 ATRNL1Q5VV63 1379 aa17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 GEMIN8Q9NWZ8 242 aaKnown RBP17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 DDX25Q9UHL0 483 aaKnown RBP17.49■□□□□ 0.39
SEMA3B-212ENST00000616701 P2RX7Q99572 595 aaKnown RBP17.48■□□□□ 0.39
SEMA3B-212ENST00000616701 KBTBD4Q9NVX7 518 aa17.48■□□□□ 0.39
SEMA3B-212ENST00000616701 ZNRF3Q9ULT6 936 aa17.48■□□□□ 0.39
SEMA3B-212ENST00000616701 CNTNAP1P78357 1384 aa17.48■□□□□ 0.39
SEMA3B-212ENST00000616701 KLRC4O43908 158 aa17.48■□□□□ 0.39
SEMA3B-212ENST00000616701 BMP3P12645 472 aa17.48■□□□□ 0.39
SEMA3B-212ENST00000616701 PAK1Q13153 545 aa17.48■□□□□ 0.39
SEMA3B-212ENST00000616701 PMS1P54277 932 aaKnown RBP17.47■□□□□ 0.39
SEMA3B-212ENST00000616701 ASIC1P78348 528 aa17.47■□□□□ 0.39
SEMA3B-212ENST00000616701 PPP1R18Q6NYC8 613 aa17.47■□□□□ 0.39
SEMA3B-212ENST00000616701 GPATCH11Q8N954 259 aa17.47■□□□□ 0.39
SEMA3B-212ENST00000616701 IGSF22Q8N9C0 903 aa17.47■□□□□ 0.39
SEMA3B-212ENST00000616701 CPLX3Q8WVH0 158 aa17.47■□□□□ 0.39
SEMA3B-212ENST00000616701 AK8Q96MA6 479 aa17.47■□□□□ 0.39
SEMA3B-212ENST00000616701 PIM2Q9P1W9 311 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms