RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 MKNK2Q9HBH9 465 aa20.86■□□□□ 0.93
TRAPPC3-209ENST00000616395 PAG1Q9NWQ8 432 aa20.86■□□□□ 0.93
TRAPPC3-209ENST00000616395 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC3-209ENST00000616395 PURAQ00577 322 aaKnown RBP20.85■□□□□ 0.93
TRAPPC3-209ENST00000616395 LEXMQ3ZCV2 418 aa20.85■□□□□ 0.93
TRAPPC3-209ENST00000616395 FAM47CQ5HY64 1035 aa20.85■□□□□ 0.93
TRAPPC3-209ENST00000616395 KIAA1211Q6ZU35 1233 aa20.85■□□□□ 0.93
TRAPPC3-209ENST00000616395 TMCO2Q7Z6W1 182 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC3-209ENST00000616395 CLASRPQ8N2M8 674 aaKnown RBP20.85■□□□□ 0.93
TRAPPC3-209ENST00000616395 RETREG2Q8NC44 543 aa20.85■□□□□ 0.93
TRAPPC3-209ENST00000616395 PPP1R13LQ8WUF5 828 aa20.85■□□□□ 0.93
TRAPPC3-209ENST00000616395 FBXL18Q96ME1 805 aa20.85■□□□□ 0.93
TRAPPC3-209ENST00000616395 ARPP21Q9UBL0 812 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC3-209ENST00000616395 ZNF536O15090 1300 aa20.84■□□□□ 0.93
TRAPPC3-209ENST00000616395 IGKV6D-41A0A0C4DH26 115 aa20.84■□□□□ 0.93
TRAPPC3-209ENST00000616395 RAB11FIP3O75154 756 aa20.84■□□□□ 0.93
TRAPPC3-209ENST00000616395 IFIT2P09913 472 aaKnown RBP20.84■□□□□ 0.93
TRAPPC3-209ENST00000616395 IL9P15248 144 aa20.84■□□□□ 0.93
TRAPPC3-209ENST00000616395 KCNA5P22460 613 aa20.84■□□□□ 0.93
TRAPPC3-209ENST00000616395 LRRC47Q8N1G4 583 aaKnown RBP20.84■□□□□ 0.93
TRAPPC3-209ENST00000616395 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.84■□□□□ 0.93
TRAPPC3-209ENST00000616395 POLR3EQ9NVU0 708 aa20.84■□□□□ 0.93
TRAPPC3-209ENST00000616395 MTUS1Q9ULD2 1270 aa20.84■□□□□ 0.93
TRAPPC3-209ENST00000616395 PITPNM1O00562 1244 aa20.83■□□□□ 0.93
TRAPPC3-209ENST00000616395 BAIAP3O94812 1187 aa20.83■□□□□ 0.93
TRAPPC3-209ENST00000616395 MYL3P08590 195 aa20.83■□□□□ 0.93
TRAPPC3-209ENST00000616395 DUSP28Q4G0W2 176 aa20.83■□□□□ 0.93
TRAPPC3-209ENST00000616395 MKL1Q969V6 931 aa20.83■□□□□ 0.93
TRAPPC3-209ENST00000616395 TRERF1Q96PN7 1200 aa20.83■□□□□ 0.93
TRAPPC3-209ENST00000616395 BOLA2Q9H3K6 86 aa20.83■□□□□ 0.93
TRAPPC3-209ENST00000616395 SUGCTQ9HAC7 445 aa20.83■□□□□ 0.93
TRAPPC3-209ENST00000616395 VTA1Q9NP79 307 aa20.83■□□□□ 0.93
TRAPPC3-209ENST00000616395 WDFY4Q6ZS81 3184 aa20.83■□□□□ 0.93
TRAPPC3-209ENST00000616395 FDX1P10109 184 aa20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 BMP3P12645 472 aa20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 KCNJ6P48051 423 aa20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 NUCB1Q02818 461 aa20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 UBE3CQ15386 1083 aa20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 NBPF20Q3BBV1 942 aa20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 ANKRD45Q5TZF3 282 aa20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 PTCRAQ6ISU1 281 aaPredicted RBP20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 CHD1LQ86WJ1 897 aa20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 GMCL1P1Q8NEA9 526 aa20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 CEP95Q96GE4 821 aa20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 PURBQ96QR8 312 aaKnown RBP20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 MTG1Q9BT17 334 aaPredicted RBP20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 LRRCC1Q9C099 1032 aa20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 PUS7LQ9H0K6 701 aaKnown RBP20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 DCTPP1Q9H773 170 aa20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 CYP39A1Q9NYL5 469 aa20.82■□□□□ 0.92
TRAPPC3-209ENST00000616395 TMEM232C9JQI7 657 aa20.81■□□□□ 0.92
TRAPPC3-209ENST00000616395 ALAS1P13196 640 aa20.81■□□□□ 0.92
TRAPPC3-209ENST00000616395 WDR5P61964 334 aaKnown RBP20.81■□□□□ 0.92
TRAPPC3-209ENST00000616395 SBK1Q52WX2 424 aa20.81■□□□□ 0.92
TRAPPC3-209ENST00000616395 SLFN13Q68D06 897 aa20.81■□□□□ 0.92
TRAPPC3-209ENST00000616395 ZBED2Q9BTP6 218 aa20.81■□□□□ 0.92
TRAPPC3-209ENST00000616395 KCNH6Q9H252 994 aa20.81■□□□□ 0.92
TRAPPC3-209ENST00000616395 GPHNQ9NQX3 736 aaPredicted RBP20.81■□□□□ 0.92
TRAPPC3-209ENST00000616395 TSHZ2Q9NRE2 1034 aa20.81■□□□□ 0.92
TRAPPC3-209ENST00000616395 ISY1Q9ULR0 285 aaKnown RBP20.81■□□□□ 0.92
TRAPPC3-209ENST00000616395 TANC1Q9C0D5 1861 aa20.81■□□□□ 0.92
TRAPPC3-209ENST00000616395 MINDY4BA8MYZ0 360 aa20.8■□□□□ 0.92
TRAPPC3-209ENST00000616395 CPT1AP50416 773 aa20.8■□□□□ 0.92
TRAPPC3-209ENST00000616395 TKFCQ3LXA3 575 aa20.8■□□□□ 0.92
TRAPPC3-209ENST00000616395 MUM1L1Q5H9M0 696 aa20.8■□□□□ 0.92
TRAPPC3-209ENST00000616395 WDR11Q9BZH6 1224 aa20.8■□□□□ 0.92
TRAPPC3-209ENST00000616395 MTMR4Q9NYA4 1195 aa20.8■□□□□ 0.92
TRAPPC3-209ENST00000616395 PTPRSQ13332 1948 aa20.8■□□□□ 0.92
TRAPPC3-209ENST00000616395 GRXCR2A6NFK2 248 aa20.79■□□□□ 0.92
TRAPPC3-209ENST00000616395 DCXO43602 365 aa20.79■□□□□ 0.92
TRAPPC3-209ENST00000616395 EIF5BO60841 1220 aaKnown RBP20.79■□□□□ 0.92
TRAPPC3-209ENST00000616395 STAT2P52630 851 aa20.79■□□□□ 0.92
TRAPPC3-209ENST00000616395 ERVK-21P61565 698 aa20.79■□□□□ 0.92
TRAPPC3-209ENST00000616395 DEFB103AP81534 67 aa20.79■□□□□ 0.92
TRAPPC3-209ENST00000616395 BFSP2Q13515 415 aa20.79■□□□□ 0.92
TRAPPC3-209ENST00000616395 MORC4Q8TE76 937 aa20.79■□□□□ 0.92
TRAPPC3-209ENST00000616395 CHMP4CQ96CF2 233 aa20.79■□□□□ 0.92
TRAPPC3-209ENST00000616395 SYNPO2Q9UMS6 1093 aa20.79■□□□□ 0.92
TRAPPC3-209ENST00000616395 BRWD1Q9NSI6 2320 aa20.79■□□□□ 0.92
TRAPPC3-209ENST00000616395 PRDM1O75626 825 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 TTLL1O95922 423 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 SNAP25P60880 206 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 IKQ13123 557 aaPredicted RBP20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 NFRKBQ6P4R8 1299 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 OR6J1Q8NGC5 347 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 TGS1Q96RS0 853 aaKnown RBP20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 HAUS7Q99871 368 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 MYH4Q9Y623 1939 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 MYH7P12883 1935 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 POTEB3A0JP26 581 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 GPNMBQ14956 572 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 TSHZ3Q63HK5 1081 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 POTEBQ6S5H4 581 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 NSMFQ6X4W1 530 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 FAM160B2Q86V87 743 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 ZNF444Q8N0Y2 327 aaPredicted RBP20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 CHURC1Q8WUH1 139 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 STAG1Q8WVM7 1258 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 ANKS1AQ92625 1134 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 STRBPQ96SI9 672 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms