RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 EPC1Q9H2F5 836 aa20.58■□□□□ 0.88
SPAST-203ENST00000615843 DBN1Q16643 649 aa20.57■□□□□ 0.88
SPAST-203ENST00000615843 LRRC23Q53EV4 343 aaPredicted RBP20.57■□□□□ 0.88
SPAST-203ENST00000615843 MAPKAPK5Q8IW41 473 aa20.57■□□□□ 0.88
SPAST-203ENST00000615843 MAST3O60307 1309 aa20.57■□□□□ 0.88
SPAST-203ENST00000615843 SART1O43290 800 aaKnown RBP20.57■□□□□ 0.88
SPAST-203ENST00000615843 N4BP1O75113 896 aaKnown RBP20.57■□□□□ 0.88
SPAST-203ENST00000615843 PNMA1Q8ND90 353 aa20.57■□□□□ 0.88
SPAST-203ENST00000615843 SDR42E1Q8WUS8 393 aa20.57■□□□□ 0.88
SPAST-203ENST00000615843 ZNF148Q9UQR1 794 aa20.57■□□□□ 0.88
SPAST-203ENST00000615843 MMP1P03956 469 aa20.57■□□□□ 0.88
SPAST-203ENST00000615843 MESDQ14696 234 aa20.57■□□□□ 0.88
SPAST-203ENST00000615843 GIPC1O14908 333 aa20.57■□□□□ 0.88
SPAST-203ENST00000615843 PDE6CP51160 858 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 KRT31Q15323 416 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 ARHGEF25Q86VW2 580 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 TSC22D3Q99576 134 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 TRIM6Q9C030 488 aaPredicted RBP20.56■□□□□ 0.88
SPAST-203ENST00000615843 THAP9Q9H5L6 903 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 KIF11P52732 1056 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 RCN2Q14257 317 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 UBE3CQ15386 1083 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 NBPF9Q3BBW0 867 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 USH1GQ495M9 461 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 ABCC12Q96J65 1359 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 TMEM232C9JQI7 657 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 MYCNP04198 464 aaPredicted RBP20.56■□□□□ 0.88
SPAST-203ENST00000615843 BPIFA3Q9BQP9 254 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 TFCP2L1Q9NZI6 479 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 PLAAQ9Y263 795 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 SRPRBQ9Y5M8 271 aaKnown RBP20.56■□□□□ 0.88
SPAST-203ENST00000615843 DKC1O60832 514 aaKnown RBP eCLIP20.56■□□□□ 0.88
SPAST-203ENST00000615843 CYP2C19P33261 490 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 CUL1Q13616 776 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 SLMAPQ14BN4 828 aa20.56■□□□□ 0.88
SPAST-203ENST00000615843 RASGRF2O14827 1237 aa20.55■□□□□ 0.88
SPAST-203ENST00000615843 TCP11X2Q5H9J9 407 aa20.55■□□□□ 0.88
SPAST-203ENST00000615843 PI4K2BQ8TCG2 481 aa20.55■□□□□ 0.88
SPAST-203ENST00000615843 SAAL1Q96ER3 474 aa20.55■□□□□ 0.88
SPAST-203ENST00000615843 FMO2Q99518 471 aa20.55■□□□□ 0.88
SPAST-203ENST00000615843 SH2D4AQ9H788 454 aa20.55■□□□□ 0.88
SPAST-203ENST00000615843 SLC24A3Q9HC58 644 aa20.55■□□□□ 0.88
SPAST-203ENST00000615843 TNNI1P19237 187 aa20.55■□□□□ 0.88
SPAST-203ENST00000615843 SLC8A3P57103 927 aa20.55■□□□□ 0.88
SPAST-203ENST00000615843 BSPRYQ5W0U4 402 aa20.55■□□□□ 0.88
SPAST-203ENST00000615843 TGFBRAP1Q8WUH2 860 aa20.55■□□□□ 0.88
SPAST-203ENST00000615843 MRPS25P82663 173 aaKnown RBP20.55■□□□□ 0.88
SPAST-203ENST00000615843 BFSP1Q12934 665 aa20.55■□□□□ 0.88
SPAST-203ENST00000615843 NR5A1Q13285 461 aa20.55■□□□□ 0.88
SPAST-203ENST00000615843 LAD1O00515 517 aa20.55■□□□□ 0.88
SPAST-203ENST00000615843 CCDC93Q567U6 631 aa20.55■□□□□ 0.88
SPAST-203ENST00000615843 IWS1Q96ST2 819 aa20.55■□□□□ 0.88
SPAST-203ENST00000615843 M0R2C6 588 aa20.54■□□□□ 0.88
SPAST-203ENST00000615843 MAP3K7O43318 606 aa20.54■□□□□ 0.88
SPAST-203ENST00000615843 ARHGAP4P98171 946 aa20.54■□□□□ 0.88
SPAST-203ENST00000615843 NXNQ6DKJ4 435 aa20.54■□□□□ 0.88
SPAST-203ENST00000615843 SRLQ86TD4 932 aa20.54■□□□□ 0.88
SPAST-203ENST00000615843 PAGE5Q96GU1 130 aa20.54■□□□□ 0.88
SPAST-203ENST00000615843 GLE1Q53GS7 698 aaKnown RBP20.54■□□□□ 0.88
SPAST-203ENST00000615843 LARP4BQ92615 738 aaKnown RBP20.54■□□□□ 0.88
SPAST-203ENST00000615843 TTC36A6NLP5 189 aa20.54■□□□□ 0.88
SPAST-203ENST00000615843 KLRF2D3W0D1 207 aa20.54■□□□□ 0.88
SPAST-203ENST00000615843 PPFIA2O75334 1257 aa20.54■□□□□ 0.88
SPAST-203ENST00000615843 TCIRG1Q13488 830 aa20.54■□□□□ 0.88
SPAST-203ENST00000615843 TMED2Q15363 201 aa20.54■□□□□ 0.88
SPAST-203ENST00000615843 MB21D1Q8N884 522 aa20.54■□□□□ 0.88
SPAST-203ENST00000615843 ANKRD7Q92527 254 aa20.54■□□□□ 0.88
SPAST-203ENST00000615843 ELAC2Q9BQ52 826 aaKnown RBP20.54■□□□□ 0.88
SPAST-203ENST00000615843 KCNF1Q9H3M0 494 aa20.54■□□□□ 0.88
SPAST-203ENST00000615843 GOLPH3LQ9H4A5 285 aa20.54■□□□□ 0.88
SPAST-203ENST00000615843 COL4A3BPQ9Y5P4 624 aa20.54■□□□□ 0.88
SPAST-203ENST00000615843 SRGAP2O75044 1071 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 MYL1P05976 194 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 DDB1Q16531 1140 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 PPM1KQ8N3J5 372 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 NGLY1Q96IV0 654 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 EYA3Q99504 573 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 ST7Q9NRC1 585 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 PTCH1Q13635 1447 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 ECEL1O95672 775 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 ZMYND12Q9H0C1 365 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 ZBTB22O15209 634 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 CCNE1P24864 410 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 FAM133AQ8N9E0 248 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 SEMA3EO15041 775 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 UFL1O94874 794 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 SMCR8Q8TEV9 937 aaPredicted RBP20.53■□□□□ 0.88
SPAST-203ENST00000615843 AK8Q96MA6 479 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 GPR108Q9NPR9 543 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 MRFAP1Q9Y605 127 aa20.53■□□□□ 0.88
SPAST-203ENST00000615843 CFBP00751 764 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 NR2F2P24468 414 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 ACTN3Q08043 901 aaPredicted RBP20.52■□□□□ 0.88
SPAST-203ENST00000615843 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.52■□□□□ 0.88
SPAST-203ENST00000615843 GDAP1Q8TB36 358 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 GJA10Q969M2 543 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 DDX25Q9UHL0 483 aaKnown RBP20.52■□□□□ 0.88
SPAST-203ENST00000615843 HSPA6P17066 643 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 CYP4F22Q6NT55 531 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 TMTC3Q6ZXV5 915 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms