RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 IQUBQ8NA54 791 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 MYOZ2Q9NPC6 264 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 HACL1Q9UJ83 578 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 C5P01031 1676 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 SHTN1A0MZ66 631 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 EFCAB8A8MWE9 144 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 TRAF5O00463 557 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 BRD2P25440 801 aaKnown RBP12.04□□□□□ -0.48
FAM3A-221ENST00000612856 INPP5BP32019 993 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 E4F1Q66K89 784 aaPredicted RBP12.04□□□□□ -0.48
FAM3A-221ENST00000612856 RASGRP2Q7LDG7 609 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 PLCD4Q9BRC7 762 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 AZI2Q9H6S1 392 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 ZNF157P51786 506 aaPredicted RBP12.04□□□□□ -0.48
FAM3A-221ENST00000612856 ADKP55263 362 aaKnown RBP12.04□□□□□ -0.48
FAM3A-221ENST00000612856 PDE4DQ08499 809 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 FOXP4Q8IVH2 680 aaPredicted RBP12.04□□□□□ -0.48
FAM3A-221ENST00000612856 GRAMD1CQ8IYS0 662 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 RRAGCQ9HB90 399 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 ALS2Q96Q42 1657 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 POTEB2H3BUK9 544 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 CBFA2T2O43439 604 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 MAGEA9P43362 315 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 CDC37Q16543 378 aaPredicted RBP12.04□□□□□ -0.48
FAM3A-221ENST00000612856 NBPF12Q5TAG4 269 aaPredicted RBP12.04□□□□□ -0.48
FAM3A-221ENST00000612856 ADGRA1Q86SQ6 560 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 TBCKQ8TEA7 893 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 GLIS2Q9BZE0 524 aaPredicted RBP12.04□□□□□ -0.48
FAM3A-221ENST00000612856 ZNF70Q9UC06 446 aaPredicted RBP12.04□□□□□ -0.48
FAM3A-221ENST00000612856 TNS2Q63HR2 1409 aa12.04□□□□□ -0.48
FAM3A-221ENST00000612856 TRIM21P19474 475 aaKnown RBP12.03□□□□□ -0.48
FAM3A-221ENST00000612856 CCZ1BP86790 482 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 CCZ1P86791 482 aaPredicted RBP12.03□□□□□ -0.48
FAM3A-221ENST00000612856 FANCCQ00597 558 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 ZNF569Q5MCW4 686 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 MOB2Q70IA6 237 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 NOSTRINQ8IVI9 506 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 GPR161Q8N6U8 529 aaKnown RBP12.03□□□□□ -0.48
FAM3A-221ENST00000612856 JPH2Q9BR39 696 aaPredicted RBP12.03□□□□□ -0.48
FAM3A-221ENST00000612856 ELP1O95163 1332 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 KIAA0100Q14667 2235 aaKnown RBP12.03□□□□□ -0.48
FAM3A-221ENST00000612856 B4DLN1 442 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 ZEB2O60315 1214 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 CTDNEP1O95476 244 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 LMNB1P20700 586 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 CCT5P48643 541 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 PABPC4Q13310 644 aaKnown RBP eCLIP12.03□□□□□ -0.482e-7■■■□□ 16.1
FAM3A-221ENST00000612856 BRAPQ7Z569 592 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 PROM2Q8N271 834 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 EXOC4Q96A65 974 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 SPAG5Q96R06 1193 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 PNPLA7Q6ZV29 1317 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 MAP3K9P80192 1104 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 DPCR1Q3MIW9 517 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 SNRNP48Q6IEG0 339 aaKnown RBP12.03□□□□□ -0.48
FAM3A-221ENST00000612856 NYAP1Q6ZVC0 841 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 FBXO33Q7Z6M2 555 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 KIAA1328Q86T90 577 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 PACS2Q86VP3 889 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 NKX2-3Q8TAU0 364 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 APOL6Q9BWW8 343 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 VPS16Q9H269 839 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 SH2B2O14492 632 aaPredicted RBP12.03□□□□□ -0.48
FAM3A-221ENST00000612856 GUCY2CP25092 1073 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 CDC27P30260 824 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 BIRC3Q13489 604 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 MYCT1Q8N699 235 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 ZNF274Q96GC6 653 aaPredicted RBP12.03□□□□□ -0.48
FAM3A-221ENST00000612856 FAM204AQ9H8W3 233 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 TMEM260Q9NX78 707 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 FLT1P17948 1338 aa12.03□□□□□ -0.48
FAM3A-221ENST00000612856 TCHHQ07283 1943 aa12.02□□□□□ -0.48
FAM3A-221ENST00000612856 N4BP1O75113 896 aaKnown RBP12.02□□□□□ -0.48
FAM3A-221ENST00000612856 ATP1A3P13637 1013 aa12.02□□□□□ -0.48
FAM3A-221ENST00000612856 H2AFXP16104 143 aaPredicted RBP12.02□□□□□ -0.48
FAM3A-221ENST00000612856 ECE1P42892 770 aa12.02□□□□□ -0.48
FAM3A-221ENST00000612856 LONRF3Q496Y0 759 aa12.02□□□□□ -0.48
FAM3A-221ENST00000612856 ACER1Q8TDN7 264 aa12.02□□□□□ -0.48
FAM3A-221ENST00000612856 GJA10Q969M2 543 aa12.02□□□□□ -0.48
FAM3A-221ENST00000612856 EPB41L4AQ9HCS5 686 aaPredicted RBP12.02□□□□□ -0.48
FAM3A-221ENST00000612856 GEMIN8Q9NWZ8 242 aaKnown RBP12.02□□□□□ -0.48
FAM3A-221ENST00000612856 NEBLO76041 1014 aa12.02□□□□□ -0.49
FAM3A-221ENST00000612856 EVX2Q03828 476 aa12.02□□□□□ -0.49
FAM3A-221ENST00000612856 BAG1Q99933 345 aaPredicted RBP12.02□□□□□ -0.49
FAM3A-221ENST00000612856 SERTAD1Q9UHV2 236 aa12.02□□□□□ -0.49
FAM3A-221ENST00000612856 PHRF1Q9P1Y6 1649 aaKnown RBP12.02□□□□□ -0.49
FAM3A-221ENST00000612856 GRIN3BO60391 1043 aa12.02□□□□□ -0.49
FAM3A-221ENST00000612856 ZNF202O95125 648 aa12.02□□□□□ -0.49
FAM3A-221ENST00000612856 CASP1P29466 404 aa12.02□□□□□ -0.49
FAM3A-221ENST00000612856 GUCY1A2P33402 732 aa12.02□□□□□ -0.49
FAM3A-221ENST00000612856 GJC1P36383 396 aa12.02□□□□□ -0.49
FAM3A-221ENST00000612856 ANTXR2P58335 489 aa12.02□□□□□ -0.49
FAM3A-221ENST00000612856 PNOCQ13519 176 aa12.02□□□□□ -0.49
FAM3A-221ENST00000612856 SV2BQ7L1I2 683 aa12.02□□□□□ -0.49
FAM3A-221ENST00000612856 HS2ST1Q7LGA3 356 aa12.02□□□□□ -0.49
FAM3A-221ENST00000612856 OXER1Q8TDS5 423 aa12.02□□□□□ -0.49
FAM3A-221ENST00000612856 CXorf56Q9H5V9 222 aa12.02□□□□□ -0.49
FAM3A-221ENST00000612856 ZMYM6O95789 1325 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 PSMA7O14818 248 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 SASH3O75995 380 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms