RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 PCDHA6Q9UN73 950 aa18.31■□□□□ 0.52
CLTCL1-207ENST00000611723 PCDHA8Q9Y5H6 950 aa18.31■□□□□ 0.52
CLTCL1-207ENST00000611723 KIF28PB7ZC32 967 aa18.3■□□□□ 0.52
CLTCL1-207ENST00000611723 MEIS2O14770 477 aa18.3■□□□□ 0.52
CLTCL1-207ENST00000611723 ADAMTS3O15072 1205 aa18.3■□□□□ 0.52
CLTCL1-207ENST00000611723 ERVK-9P63128 1117 aa18.3■□□□□ 0.52
CLTCL1-207ENST00000611723 ERVK-24P63145 666 aa18.3■□□□□ 0.52
CLTCL1-207ENST00000611723 PLS1Q14651 629 aa18.3■□□□□ 0.52
CLTCL1-207ENST00000611723 BRAPQ7Z569 592 aa18.3■□□□□ 0.52
CLTCL1-207ENST00000611723 SHCBP1Q8NEM2 672 aa18.3■□□□□ 0.52
CLTCL1-207ENST00000611723 GPRC5AQ8NFJ5 357 aa18.3■□□□□ 0.52
CLTCL1-207ENST00000611723 PAGR1Q9BTK6 254 aa18.3■□□□□ 0.52
CLTCL1-207ENST00000611723 MOV10L1Q9BXT6 1211 aaKnown RBP18.3■□□□□ 0.52
CLTCL1-207ENST00000611723 RNF146Q9NTX7 359 aa18.3■□□□□ 0.52
CLTCL1-207ENST00000611723 NR5A1Q13285 461 aa18.29■□□□□ 0.52
CLTCL1-207ENST00000611723 TAF1CQ15572 869 aaPredicted RBP18.29■□□□□ 0.52
CLTCL1-207ENST00000611723 MUM1L1Q5H9M0 696 aa18.29■□□□□ 0.52
CLTCL1-207ENST00000611723 FERMT3Q86UX7 667 aa18.29■□□□□ 0.52
CLTCL1-207ENST00000611723 NOSTRINQ8IVI9 506 aa18.29■□□□□ 0.52
CLTCL1-207ENST00000611723 REXO1Q8N1G1 1221 aaKnown RBP18.29■□□□□ 0.52
CLTCL1-207ENST00000611723 ZFYVE28Q9HCC9 887 aa18.29■□□□□ 0.52
CLTCL1-207ENST00000611723 FBXO40Q9UH90 709 aa18.29■□□□□ 0.52
CLTCL1-207ENST00000611723 ATP6V1DQ9Y5K8 247 aa18.29■□□□□ 0.52
CLTCL1-207ENST00000611723 GCOM1H8Y6P7 765 aaPredicted RBP18.28■□□□□ 0.52
CLTCL1-207ENST00000611723 TLR2O60603 784 aa18.28■□□□□ 0.52
CLTCL1-207ENST00000611723 PEX10O60683 326 aa18.28■□□□□ 0.52
CLTCL1-207ENST00000611723 FOSP01100 380 aaPredicted RBP18.28■□□□□ 0.52
CLTCL1-207ENST00000611723 POLR2MP0CAP2 368 aa18.28■□□□□ 0.52
CLTCL1-207ENST00000611723 BCRP11274 1271 aa18.28■□□□□ 0.52
CLTCL1-207ENST00000611723 HSD17B4P51659 736 aa18.28■□□□□ 0.52
CLTCL1-207ENST00000611723 CCNA1P78396 465 aa18.28■□□□□ 0.52
CLTCL1-207ENST00000611723 FAM110CQ1W6H9 321 aa18.28■□□□□ 0.52
CLTCL1-207ENST00000611723 FOXD4L5Q5VV16 416 aaPredicted RBP18.28■□□□□ 0.52
CLTCL1-207ENST00000611723 C17orf99Q6UX52 265 aa18.28■□□□□ 0.52
CLTCL1-207ENST00000611723 FOXD4L4Q8WXT5 416 aaPredicted RBP18.28■□□□□ 0.52
CLTCL1-207ENST00000611723 TBC1D5Q92609 795 aa18.28■□□□□ 0.52
CLTCL1-207ENST00000611723 ACAD9Q9H845 621 aa18.28■□□□□ 0.52
CLTCL1-207ENST00000611723 NFIBO00712 420 aa18.27■□□□□ 0.52
CLTCL1-207ENST00000611723 AP3B2Q13367 1082 aa18.27■□□□□ 0.52
CLTCL1-207ENST00000611723 GNL2Q13823 731 aaKnown RBP18.27■□□□□ 0.52
CLTCL1-207ENST00000611723 USP17L6PQ6QN14 398 aa18.27■□□□□ 0.52
CLTCL1-207ENST00000611723 KRT25Q7Z3Z0 450 aa18.27■□□□□ 0.52
CLTCL1-207ENST00000611723 CTU1Q7Z7A3 348 aaKnown RBP18.27■□□□□ 0.52
CLTCL1-207ENST00000611723 ANKRD13CQ8N6S4 541 aa18.27■□□□□ 0.52
CLTCL1-207ENST00000611723 TNPO1Q92973 898 aaKnown RBP18.27■□□□□ 0.52
CLTCL1-207ENST00000611723 CFHR5Q9BXR6 569 aa18.27■□□□□ 0.52
CLTCL1-207ENST00000611723 MROH8Q9H579 483 aa18.27■□□□□ 0.52
CLTCL1-207ENST00000611723 BIN2Q9UBW5 565 aaPredicted RBP18.27■□□□□ 0.52
CLTCL1-207ENST00000611723 CFBP00751 764 aa18.26■□□□□ 0.51
CLTCL1-207ENST00000611723 ERCC3P19447 782 aa18.26■□□□□ 0.51
CLTCL1-207ENST00000611723 UBE2SQ16763 222 aa18.26■□□□□ 0.51
CLTCL1-207ENST00000611723 EARS2Q5JPH6 523 aaKnown RBP18.26■□□□□ 0.51
CLTCL1-207ENST00000611723 PRPF38BQ5VTL8 546 aaKnown RBP18.26■□□□□ 0.51
CLTCL1-207ENST00000611723 JAKMIP3Q5VZ66 844 aa18.26■□□□□ 0.51
CLTCL1-207ENST00000611723 ATL3Q6DD88 541 aa18.26■□□□□ 0.51
CLTCL1-207ENST00000611723 CLEC17AQ6ZS10 378 aa18.26■□□□□ 0.51
CLTCL1-207ENST00000611723 RASGRP4Q8TDF6 673 aa18.26■□□□□ 0.51
CLTCL1-207ENST00000611723 HOMER2Q9NSB8 354 aa18.26■□□□□ 0.51
CLTCL1-207ENST00000611723 CCDC194A0A1B0GVG4 234 aa18.25■□□□□ 0.51
CLTCL1-207ENST00000611723 TRAPPC10P48553 1259 aa18.25■□□□□ 0.51
CLTCL1-207ENST00000611723 CRHR2Q13324 411 aa18.25■□□□□ 0.51
CLTCL1-207ENST00000611723 MYSM1Q5VVJ2 828 aa18.25■□□□□ 0.51
CLTCL1-207ENST00000611723 RNF207Q6ZRF8 634 aa18.25■□□□□ 0.51
CLTCL1-207ENST00000611723 NCAPG2Q86XI2 1143 aa18.25■□□□□ 0.51
CLTCL1-207ENST00000611723 SYTL5Q8TDW5 730 aaPredicted RBP18.25■□□□□ 0.51
CLTCL1-207ENST00000611723 TMEM260Q9NX78 707 aa18.25■□□□□ 0.51
CLTCL1-207ENST00000611723 HOXA13P31271 388 aaPredicted RBP18.24■□□□□ 0.51
CLTCL1-207ENST00000611723 RPS6P62753 249 aaKnown RBP18.24■□□□□ 0.51
CLTCL1-207ENST00000611723 BAATQ14032 418 aaPredicted RBP18.24■□□□□ 0.51
CLTCL1-207ENST00000611723 NONOQ15233 471 aaKnown RBP eCLIP18.24■□□□□ 0.51
CLTCL1-207ENST00000611723 NOM1Q5C9Z4 860 aaKnown RBP18.24■□□□□ 0.51
CLTCL1-207ENST00000611723 RILPL1Q5EBL4 403 aa18.24■□□□□ 0.51
CLTCL1-207ENST00000611723 PIK3AP1Q6ZUJ8 805 aa18.24■□□□□ 0.51
CLTCL1-207ENST00000611723 A1CFQ9NQ94 594 aaKnown RBP18.24■□□□□ 0.51
CLTCL1-207ENST00000611723 CYP39A1Q9NYL5 469 aa18.24■□□□□ 0.51
CLTCL1-207ENST00000611723 CPA4Q9UI42 421 aa18.24■□□□□ 0.51
CLTCL1-207ENST00000611723 SPDYE3A6NKU9 549 aa18.23■□□□□ 0.51
CLTCL1-207ENST00000611723 TOB1P50616 345 aaPredicted RBP18.23■□□□□ 0.51
CLTCL1-207ENST00000611723 FAM173BQ6P4H8 233 aa18.23■□□□□ 0.51
CLTCL1-207ENST00000611723 ABRAQ8N0Z2 381 aa18.23■□□□□ 0.51
CLTCL1-207ENST00000611723 CRYGNQ8WXF5 182 aa18.23■□□□□ 0.51
CLTCL1-207ENST00000611723 ZNF396Q96N95 335 aaPredicted RBP18.23■□□□□ 0.51
CLTCL1-207ENST00000611723 ANO3Q9BYT9 981 aa18.23■□□□□ 0.51
CLTCL1-207ENST00000611723 PORCNQ9H237 461 aa18.23■□□□□ 0.51
CLTCL1-207ENST00000611723 R3HDMLQ9H3Y0 253 aa18.23■□□□□ 0.51
CLTCL1-207ENST00000611723 PFASO15067 1338 aa18.23■□□□□ 0.51
CLTCL1-207ENST00000611723 FAM205CA6NFA0 338 aa18.22■□□□□ 0.51
CLTCL1-207ENST00000611723 STRNO43815 780 aa18.22■□□□□ 0.51
CLTCL1-207ENST00000611723 EDIL3O43854 480 aa18.22■□□□□ 0.51
CLTCL1-207ENST00000611723 MAPK4P31152 587 aa18.22■□□□□ 0.51
CLTCL1-207ENST00000611723 USP11P51784 963 aa18.22■□□□□ 0.51
CLTCL1-207ENST00000611723 NSMFQ6X4W1 530 aa18.22■□□□□ 0.51
CLTCL1-207ENST00000611723 EFCC1Q9HA90 598 aa18.22■□□□□ 0.51
CLTCL1-207ENST00000611723 COL20A1Q9P218 1284 aa18.22■□□□□ 0.51
CLTCL1-207ENST00000611723 NOL7Q9UMY1 257 aaKnown RBP18.22■□□□□ 0.51
CLTCL1-207ENST00000611723 FRMPD4Q14CM0 1322 aa18.22■□□□□ 0.51
CLTCL1-207ENST00000611723 TBC1D8O95759 1140 aa18.21■□□□□ 0.51
CLTCL1-207ENST00000611723 CYP3A4P08684 503 aa18.21■□□□□ 0.51
CLTCL1-207ENST00000611723 SREBF1P36956 1147 aa18.21■□□□□ 0.51
CLTCL1-207ENST00000611723 DNM1Q05193 864 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms