RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 KCTD1Q719H9 257 aa20.56■□□□□ 0.88
CHMP4A-211ENST00000609024 SLC9A7Q96T83 725 aa20.56■□□□□ 0.88
CHMP4A-211ENST00000609024 MPHOSPH6Q99547 160 aaKnown RBP20.56■□□□□ 0.88
CHMP4A-211ENST00000609024 FTOQ9C0B1 505 aaKnown RBP eCLIP20.56■□□□□ 0.881e-12■■■■□ 25.8
CHMP4A-211ENST00000609024 TRMT13Q9NUP7 481 aaKnown RBP20.56■□□□□ 0.88
CHMP4A-211ENST00000609024 COG5Q9UP83 839 aa20.56■□□□□ 0.88
CHMP4A-211ENST00000609024 MTMR7Q9Y216 660 aa20.56■□□□□ 0.88
CHMP4A-211ENST00000609024 ZNF536O15090 1300 aa20.55■□□□□ 0.88
CHMP4A-211ENST00000609024 TSPY2A6NKD2 308 aa20.55■□□□□ 0.88
CHMP4A-211ENST00000609024 M0R2C6 588 aa20.55■□□□□ 0.88
CHMP4A-211ENST00000609024 RFC2P35250 354 aa20.55■□□□□ 0.88
CHMP4A-211ENST00000609024 KCNQ1P51787 676 aa20.55■□□□□ 0.88
CHMP4A-211ENST00000609024 SNAP25P60880 206 aa20.55■□□□□ 0.88
CHMP4A-211ENST00000609024 TTLL4Q14679 1199 aa20.55■□□□□ 0.88
CHMP4A-211ENST00000609024 CCDC96Q2M329 555 aa20.55■□□□□ 0.88
CHMP4A-211ENST00000609024 DUSP28Q4G0W2 176 aa20.55■□□□□ 0.88
CHMP4A-211ENST00000609024 NOD1Q9Y239 953 aa20.55■□□□□ 0.88
CHMP4A-211ENST00000609024 PLIN4Q96Q06 1357 aa20.55■□□□□ 0.88
CHMP4A-211ENST00000609024 PLA2G6O60733 806 aa20.54■□□□□ 0.88
CHMP4A-211ENST00000609024 PTGS1P23219 599 aa20.54■□□□□ 0.88
CHMP4A-211ENST00000609024 PPARAQ07869 468 aa20.54■□□□□ 0.88
CHMP4A-211ENST00000609024 MUM1L1Q5H9M0 696 aa20.54■□□□□ 0.88
CHMP4A-211ENST00000609024 OR6J1Q8NGC5 347 aa20.54■□□□□ 0.88
CHMP4A-211ENST00000609024 PHOSPHO2Q8TCD6 241 aa20.54■□□□□ 0.88
CHMP4A-211ENST00000609024 ARNTL2Q8WYA1 636 aa20.54■□□□□ 0.88
CHMP4A-211ENST00000609024 MTG1Q9BT17 334 aaPredicted RBP20.54■□□□□ 0.88
CHMP4A-211ENST00000609024 WDR11Q9BZH6 1224 aa20.54■□□□□ 0.88
CHMP4A-211ENST00000609024 PRR12Q9ULL5 1215 aa20.54■□□□□ 0.88
CHMP4A-211ENST00000609024 MTCH2Q9Y6C9 303 aa20.54■□□□□ 0.88
CHMP4A-211ENST00000609024 DDX49Q9Y6V7 483 aaKnown RBP20.54■□□□□ 0.88
CHMP4A-211ENST00000609024 RFXAPO00287 272 aa20.53■□□□□ 0.88
CHMP4A-211ENST00000609024 PTPDC1A2A3K4 754 aa20.52■□□□□ 0.88
CHMP4A-211ENST00000609024 ICAM1P05362 532 aa20.52■□□□□ 0.88
CHMP4A-211ENST00000609024 KCNJ6P48051 423 aa20.52■□□□□ 0.88
CHMP4A-211ENST00000609024 PURAQ00577 322 aaKnown RBP20.52■□□□□ 0.88
CHMP4A-211ENST00000609024 BFSP2Q13515 415 aa20.52■□□□□ 0.88
CHMP4A-211ENST00000609024 LRRC37A2A6NM11 1700 aa20.51■□□□□ 0.87
CHMP4A-211ENST00000609024 KPNA6O60684 536 aa20.51■□□□□ 0.87
CHMP4A-211ENST00000609024 POU3F3P20264 500 aaPredicted RBP20.51■□□□□ 0.87
CHMP4A-211ENST00000609024 ALDH5A1P51649 535 aaPredicted RBP20.51■□□□□ 0.87
CHMP4A-211ENST00000609024 CHMP4BP1P59074 171 aa20.51■□□□□ 0.87
CHMP4A-211ENST00000609024 BAATQ14032 418 aaPredicted RBP20.51■□□□□ 0.87
CHMP4A-211ENST00000609024 TMEM63BQ5T3F8 832 aa20.51■□□□□ 0.87
CHMP4A-211ENST00000609024 HLA-CQ95604 372 aa20.51■□□□□ 0.87
CHMP4A-211ENST00000609024 LOC102724159A0A0B4J2E5 919 aa20.5■□□□□ 0.87
CHMP4A-211ENST00000609024 B4DLN1 442 aa20.5■□□□□ 0.87
CHMP4A-211ENST00000609024 MRPL12P52815 198 aaKnown RBP20.5■□□□□ 0.87
CHMP4A-211ENST00000609024 PDE4DQ08499 809 aa20.5■□□□□ 0.87
CHMP4A-211ENST00000609024 PPP2R5BQ15173 497 aa20.5■□□□□ 0.87
CHMP4A-211ENST00000609024 PWP2Q15269 919 aaKnown RBP20.5■□□□□ 0.87
CHMP4A-211ENST00000609024 TSHZ3Q63HK5 1081 aa20.5■□□□□ 0.87
CHMP4A-211ENST00000609024 MORC4Q8TE76 937 aa20.5■□□□□ 0.87
CHMP4A-211ENST00000609024 PURBQ96QR8 312 aaKnown RBP20.5■□□□□ 0.87
CHMP4A-211ENST00000609024 FSD1Q9BTV5 496 aa20.5■□□□□ 0.87
CHMP4A-211ENST00000609024 PITPNM1O00562 1244 aa20.49■□□□□ 0.87
CHMP4A-211ENST00000609024 NKRFO15226 690 aaKnown RBP eCLIP20.49■□□□□ 0.87
CHMP4A-211ENST00000609024 RANBP6O60518 1105 aaKnown RBP20.49■□□□□ 0.87
CHMP4A-211ENST00000609024 NBPF20Q3BBV1 942 aa20.49■□□□□ 0.87
CHMP4A-211ENST00000609024 TMEM31Q5JXX7 168 aa20.49■□□□□ 0.87
CHMP4A-211ENST00000609024 NFRKBQ6P4R8 1299 aa20.49■□□□□ 0.87
CHMP4A-211ENST00000609024 HERC6Q8IVU3 1022 aa20.49■□□□□ 0.87
CHMP4A-211ENST00000609024 CCDC155Q8N6L0 562 aa20.49■□□□□ 0.87
CHMP4A-211ENST00000609024 DCAF4Q8WV16 495 aa20.49■□□□□ 0.87
CHMP4A-211ENST00000609024 ZBED2Q9BTP6 218 aa20.49■□□□□ 0.87
CHMP4A-211ENST00000609024 PNMA2Q9UL42 364 aa20.49■□□□□ 0.87
CHMP4A-211ENST00000609024 TLL1O43897 1013 aa20.48■□□□□ 0.87
CHMP4A-211ENST00000609024 IQCF3P0C7M6 154 aa20.48■□□□□ 0.87
CHMP4A-211ENST00000609024 CALML3P27482 149 aa20.48■□□□□ 0.87
CHMP4A-211ENST00000609024 TOMM22Q9NS69 142 aa20.48■□□□□ 0.87
CHMP4A-211ENST00000609024 CHD7Q9P2D1 2997 aa20.47■□□□□ 0.87
CHMP4A-211ENST00000609024 BAIAP3O94812 1187 aa20.47■□□□□ 0.87
CHMP4A-211ENST00000609024 TAP1Q03518 808 aa20.47■□□□□ 0.87
CHMP4A-211ENST00000609024 PTPN11Q06124 597 aaPredicted RBP20.47■□□□□ 0.87
CHMP4A-211ENST00000609024 RNF207Q6ZRF8 634 aa20.47■□□□□ 0.87
CHMP4A-211ENST00000609024 SCFD2Q8WU76 684 aa20.47■□□□□ 0.87
CHMP4A-211ENST00000609024 SEC62Q99442 399 aaKnown RBP20.47■□□□□ 0.87
CHMP4A-211ENST00000609024 LRFN3Q9BTN0 628 aa20.47■□□□□ 0.87
CHMP4A-211ENST00000609024 RANBP17Q9H2T7 1088 aaKnown RBP20.47■□□□□ 0.87
CHMP4A-211ENST00000609024 EPHX3Q9H6B9 360 aa20.47■□□□□ 0.87
CHMP4A-211ENST00000609024 ARIH1Q9Y4X5 557 aaPredicted RBP20.47■□□□□ 0.87
CHMP4A-211ENST00000609024 PRRC2BQ5JSZ5 2229 aaKnown RBP20.46■□□□□ 0.87
CHMP4A-211ENST00000609024 NMT2O60551 498 aa20.46■□□□□ 0.87
CHMP4A-211ENST00000609024 SLC16A2P36021 539 aa20.46■□□□□ 0.87
CHMP4A-211ENST00000609024 CTDSPL2Q05D32 466 aa20.46■□□□□ 0.87
CHMP4A-211ENST00000609024 SYDE2Q5VT97 1194 aa20.46■□□□□ 0.87
CHMP4A-211ENST00000609024 KRT40Q6A162 431 aa20.46■□□□□ 0.87
CHMP4A-211ENST00000609024 VWCEQ96DN2 955 aa20.46■□□□□ 0.87
CHMP4A-211ENST00000609024 SCN5AQ14524 2016 aa20.45■□□□□ 0.86
CHMP4A-211ENST00000609024 RBM47A0AV96 593 aaKnown RBP20.45■□□□□ 0.86
CHMP4A-211ENST00000609024 EPOPA6NHQ4 379 aa20.45■□□□□ 0.86
CHMP4A-211ENST00000609024 NFIBO00712 420 aa20.45■□□□□ 0.86
CHMP4A-211ENST00000609024 TXNP10599 105 aaKnown RBP20.45■□□□□ 0.86
CHMP4A-211ENST00000609024 CRBNQ96SW2 442 aa20.45■□□□□ 0.86
CHMP4A-211ENST00000609024 IL17RBQ9NRM6 502 aa20.45■□□□□ 0.86
CHMP4A-211ENST00000609024 TTC41PQ6P2S7 1318 aa20.45■□□□□ 0.86
CHMP4A-211ENST00000609024 HOXD11P31277 338 aaPredicted RBP20.44■□□□□ 0.86
CHMP4A-211ENST00000609024 GRB10Q13322 594 aa20.44■□□□□ 0.86
CHMP4A-211ENST00000609024 GPCPD1Q9NPB8 672 aa20.44■□□□□ 0.86
CHMP4A-211ENST00000609024 PTGISQ16647 500 aa20.43■□□□□ 0.86
CHMP4A-211ENST00000609024 RRP12Q5JTH9 1297 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms