RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 CAGE1Q8TC20 777 aa7.14□□□□□ -1.27
HDDC2-205ENST00000608456 CCDC42Q96M95 316 aa7.14□□□□□ -1.27
HDDC2-205ENST00000608456 CHP1Q99653 195 aa7.14□□□□□ -1.27
HDDC2-205ENST00000608456 PUS3Q9BZE2 481 aaKnown RBP7.14□□□□□ -1.27
HDDC2-205ENST00000608456 KAT14Q9H8E8 782 aa7.14□□□□□ -1.27
HDDC2-205ENST00000608456 SUGCTQ9HAC7 445 aa7.14□□□□□ -1.27
HDDC2-205ENST00000608456 GOPCQ9HD26 462 aa7.14□□□□□ -1.27
HDDC2-205ENST00000608456 GPCPD1Q9NPB8 672 aa7.14□□□□□ -1.27
HDDC2-205ENST00000608456 GDF3Q9NR23 364 aa7.14□□□□□ -1.27
HDDC2-205ENST00000608456 KBTBD4Q9NVX7 518 aa7.14□□□□□ -1.27
HDDC2-205ENST00000608456 NLRP2Q9NX02 1062 aa7.14□□□□□ -1.27
HDDC2-205ENST00000608456 DONSONQ9NYP3 566 aa7.14□□□□□ -1.27
HDDC2-205ENST00000608456 SETD1BQ9UPS6 1966 aaKnown RBP7.13□□□□□ -1.27
HDDC2-205ENST00000608456 MYO5AQ9Y4I1 1855 aaKnown RBP7.13□□□□□ -1.27
HDDC2-205ENST00000608456 COL18A1P39060 1754 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 DCCP43146 1447 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 XDHP47989 1333 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 PVALEFA0A1B0GWK0 134 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 BTNL10A8MVZ5 291 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 RBAK-RBAKDNI3L0D1 243 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 ORC4O43929 436 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 PDE8AO60658 829 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 ATP1A1P05023 1023 aaKnown RBP7.13□□□□□ -1.27
HDDC2-205ENST00000608456 IDEP14735 1019 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 COL9A1P20849 921 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 CALRP27797 417 aaKnown RBP7.13□□□□□ -1.27
HDDC2-205ENST00000608456 AFMP43652 599 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 CCT5P48643 541 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 CDR1P51861 262 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 MNAT1P51948 309 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 STX17P56962 302 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 GNGT1P63211 74 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 GRIN1Q05586 938 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 CTDSPL2Q05D32 466 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 TBC1D8BQ0IIM8 1120 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 BIRC3Q13489 604 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 SCARF1Q14162 830 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 NEDD9Q14511 834 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 PPP2R5EQ16537 467 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 ZNF827Q17R98 1081 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 CFAP58Q5T655 872 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 WLSQ5T9L3 541 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 NCAPH2Q6IBW4 605 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 KLHL10Q6JEL2 608 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 FOXR1Q6PIV2 292 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 RUFY4Q6ZNE9 571 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 TTLL7Q6ZT98 887 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 DAGLBQ8NCG7 672 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 RBM46Q8TBY0 533 aaKnown RBP7.13□□□□□ -1.27
HDDC2-205ENST00000608456 ANKS1AQ92625 1134 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 LRRC45Q96CN5 670 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 EPSTI1Q96J88 318 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 ZNF594Q96JF6 807 aaPredicted RBP7.13□□□□□ -1.27
HDDC2-205ENST00000608456 C7orf25Q9BPX7 421 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 BRIP1Q9BX63 1249 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 MOV10L1Q9BXT6 1211 aaKnown RBP7.13□□□□□ -1.27
HDDC2-205ENST00000608456 VPS16Q9H269 839 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 SH2D4AQ9H788 454 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 NHEJ1Q9H9Q4 299 aaPredicted RBP7.13□□□□□ -1.27
HDDC2-205ENST00000608456 PIH1D3Q9NQM4 214 aaKnown RBP7.13□□□□□ -1.27
HDDC2-205ENST00000608456 CTNND2Q9UQB3 1225 aa7.13□□□□□ -1.27
HDDC2-205ENST00000608456 ALS2Q96Q42 1657 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 RIC1Q4ADV7 1423 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 TNS3Q68CZ2 1445 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 GRIN2DO15399 1336 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 A0A087X0B3 334 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.12□□□□□ -1.27
HDDC2-205ENST00000608456 NDUFAB1O14561 156 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 PHACTR2O75167 634 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 IDH1O75874 414 aaKnown RBP7.12□□□□□ -1.27
HDDC2-205ENST00000608456 STARD3NLO95772 234 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 FAM107AO95990 144 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 GHRP10912 638 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 TRIM21P19474 475 aaKnown RBP7.12□□□□□ -1.27
HDDC2-205ENST00000608456 SMARCA1P28370 1054 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 SLC8A1P32418 973 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 KIF5BP33176 963 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 GUCY1A2P33402 732 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 RDXP35241 583 aaKnown RBP7.12□□□□□ -1.27
HDDC2-205ENST00000608456 PRCPP42785 496 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 CTSWP56202 376 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 TROAPQ12815 778 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 PSMD2Q13200 908 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 NR5A1Q13285 461 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 MTMR3Q13615 1198 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 CUL1Q13616 776 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 SEPT2Q15019 361 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 CLUL1Q15846 466 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 IFI16Q16666 785 aaKnown RBP7.12□□□□□ -1.27
HDDC2-205ENST00000608456 LACTB2Q53H82 288 aaPredicted RBP7.12□□□□□ -1.27
HDDC2-205ENST00000608456 SPECC1Q5M775 1068 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 AGBL2Q5U5Z8 902 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 TTI2Q6NXR4 508 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 C6orf89Q6UWU4 347 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 DTHD1Q6ZMT9 781 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 TMTC3Q6ZXV5 915 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 USP49Q70CQ1 688 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 SND1Q7KZF4 910 aaKnown RBP eCLIP7.12□□□□□ -1.27
HDDC2-205ENST00000608456 C4orf32Q8N8J7 132 aa7.12□□□□□ -1.27
HDDC2-205ENST00000608456 SPATA5Q8NB90 893 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms