RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 CYP21A2P08686 494 aa12.15□□□□□ -0.46
LINC01001-203ENST00000607448 GOLGA8HP0CJ92 632 aa12.15□□□□□ -0.46
LINC01001-203ENST00000607448 SNHG28P0DPA3 235 aa12.15□□□□□ -0.46
LINC01001-203ENST00000607448 COPB2P35606 906 aa12.15□□□□□ -0.46
LINC01001-203ENST00000607448 OAZ1P54368 228 aa12.15□□□□□ -0.46
LINC01001-203ENST00000607448 CNTN2Q02246 1040 aa12.15□□□□□ -0.46
LINC01001-203ENST00000607448 DNM1Q05193 864 aaKnown RBP12.15□□□□□ -0.46
LINC01001-203ENST00000607448 MUM1L1Q5H9M0 696 aa12.15□□□□□ -0.46
LINC01001-203ENST00000607448 CYB5R4Q7L1T6 521 aa12.15□□□□□ -0.46
LINC01001-203ENST00000607448 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC01001-203ENST00000607448 NECAB1Q8N987 351 aa12.15□□□□□ -0.46
LINC01001-203ENST00000607448 RNF214Q8ND24 703 aa12.15□□□□□ -0.46
LINC01001-203ENST00000607448 RANBP17Q9H2T7 1088 aaKnown RBP12.15□□□□□ -0.46
LINC01001-203ENST00000607448 ASTN1O14525 1302 aa12.14□□□□□ -0.47
LINC01001-203ENST00000607448 TNKSO95271 1327 aa12.14□□□□□ -0.47
LINC01001-203ENST00000607448 SEPT4O43236 478 aa12.14□□□□□ -0.47
LINC01001-203ENST00000607448 PTMAP06454 111 aaKnown RBP12.14□□□□□ -0.47
LINC01001-203ENST00000607448 ALAS1P13196 640 aa12.14□□□□□ -0.47
LINC01001-203ENST00000607448 ZNF543Q08ER8 600 aa12.14□□□□□ -0.47
LINC01001-203ENST00000607448 GJC2Q5T442 439 aaPredicted RBP12.14□□□□□ -0.47
LINC01001-203ENST00000607448 BTNL9Q6UXG8 535 aa12.14□□□□□ -0.47
LINC01001-203ENST00000607448 STOX1Q6ZVD7 989 aa12.14□□□□□ -0.47
LINC01001-203ENST00000607448 ANKRD35Q8N283 1001 aa12.14□□□□□ -0.47
LINC01001-203ENST00000607448 ENAHQ8N8S7 591 aaPredicted RBP12.14□□□□□ -0.47
LINC01001-203ENST00000607448 CHST13Q8NET6 341 aa12.14□□□□□ -0.47
LINC01001-203ENST00000607448 DDX11Q96FC9 970 aa12.14□□□□□ -0.47
LINC01001-203ENST00000607448 ZSCAN10Q96SZ4 725 aaPredicted RBP12.14□□□□□ -0.47
LINC01001-203ENST00000607448 LLPHQ9BRT6 129 aaKnown RBP12.14□□□□□ -0.47
LINC01001-203ENST00000607448 A1CFQ9NQ94 594 aaKnown RBP12.14□□□□□ -0.47
LINC01001-203ENST00000607448 RNF146Q9NTX7 359 aa12.14□□□□□ -0.47
LINC01001-203ENST00000607448 CTNNA3Q9UI47 895 aa12.14□□□□□ -0.47
LINC01001-203ENST00000607448 COLQQ9Y215 455 aaPredicted RBP12.14□□□□□ -0.47
LINC01001-203ENST00000607448 DIS3Q9Y2L1 958 aaKnown RBP12.14□□□□□ -0.47
LINC01001-203ENST00000607448 KIF3AQ9Y496 699 aa12.14□□□□□ -0.47
LINC01001-203ENST00000607448 LTBP2Q14767 1821 aa12.14□□□□□ -0.47
LINC01001-203ENST00000607448 ADCY6O43306 1168 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 EVI5O60447 810 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 SNAI1O95863 264 aaPredicted RBP12.13□□□□□ -0.47
LINC01001-203ENST00000607448 ZNF865P0CJ78 1059 aaPredicted RBP12.13□□□□□ -0.47
LINC01001-203ENST00000607448 CAPN2P17655 700 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 COL9A3Q14050 684 aaPredicted RBP12.13□□□□□ -0.47
LINC01001-203ENST00000607448 SYDE2Q5VT97 1194 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 DGKHQ86XP1 1220 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 C7orf61Q8IZ16 206 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 PNMA1Q8ND90 353 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 GTF3C6Q969F1 213 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 TRERF1Q96PN7 1200 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 PURBQ96QR8 312 aaKnown RBP12.13□□□□□ -0.47
LINC01001-203ENST00000607448 FUCA2Q9BTY2 467 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 ACAD9Q9H845 621 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.13□□□□□ -0.47
LINC01001-203ENST00000607448 LAMA2P24043 3122 aaKnown RBP12.13□□□□□ -0.47
LINC01001-203ENST00000607448 ICAM1P05362 532 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 CCDC192P0DO97 292 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 FDX1P10109 184 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 IRX5P78411 483 aaPredicted RBP12.13□□□□□ -0.47
LINC01001-203ENST00000607448 LRRC26Q2I0M4 334 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 MAMDC4Q6UXC1 1216 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 CHRDL2Q6WN34 429 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 IQCA1Q86XH1 822 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 UBA5Q9GZZ9 404 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 ZSCAN16Q9H4T2 348 aaPredicted RBP12.13□□□□□ -0.47
LINC01001-203ENST00000607448 SENP2Q9HC62 589 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 FBXO40Q9UH90 709 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 CCPG1Q9ULG6 757 aa12.13□□□□□ -0.47
LINC01001-203ENST00000607448 SOWAHBA6NEL2 793 aa12.12□□□□□ -0.47
LINC01001-203ENST00000607448 MSCO60682 206 aa12.12□□□□□ -0.47
LINC01001-203ENST00000607448 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
LINC01001-203ENST00000607448 TPM3P06753 285 aa12.12□□□□□ -0.47
LINC01001-203ENST00000607448 SEC23AQ15436 765 aa12.12□□□□□ -0.47
LINC01001-203ENST00000607448 HABP4Q5JVS0 413 aaKnown RBP12.12□□□□□ -0.47
LINC01001-203ENST00000607448 CHST3Q7LGC8 479 aa12.12□□□□□ -0.47
LINC01001-203ENST00000607448 CCDC144CPQ8IYA2 1237 aa12.12□□□□□ -0.47
LINC01001-203ENST00000607448 FAM133AQ8N9E0 248 aa12.12□□□□□ -0.47
LINC01001-203ENST00000607448 ANKS1AQ92625 1134 aa12.12□□□□□ -0.47
LINC01001-203ENST00000607448 KRT23Q9C075 422 aa12.12□□□□□ -0.47
LINC01001-203ENST00000607448 SENP6Q9GZR1 1112 aaPredicted RBP12.12□□□□□ -0.47
LINC01001-203ENST00000607448 KAT14Q9H8E8 782 aa12.12□□□□□ -0.47
LINC01001-203ENST00000607448 DDX19AQ9NUU7 478 aaKnown RBP12.12□□□□□ -0.47
LINC01001-203ENST00000607448 BAZ2BQ9UIF8 2168 aaKnown RBP12.12□□□□□ -0.47
LINC01001-203ENST00000607448 SYNGAP1Q96PV0 1343 aa12.11□□□□□ -0.47
LINC01001-203ENST00000607448 E7EWF7 191 aa12.11□□□□□ -0.47
LINC01001-203ENST00000607448 NFIBO00712 420 aa12.11□□□□□ -0.47
LINC01001-203ENST00000607448 PFKFB2O60825 505 aa12.11□□□□□ -0.47
LINC01001-203ENST00000607448 PGK1P00558 417 aa12.11□□□□□ -0.47
LINC01001-203ENST00000607448 SYN1P17600 705 aa12.11□□□□□ -0.47
LINC01001-203ENST00000607448 PTGS1P23219 599 aa12.11□□□□□ -0.47
LINC01001-203ENST00000607448 ATN1P54259 1190 aaPredicted RBP12.11□□□□□ -0.47
LINC01001-203ENST00000607448 HMGN5P82970 282 aaKnown RBP12.11□□□□□ -0.47
LINC01001-203ENST00000607448 Q6ZUG5 572 aa12.11□□□□□ -0.47
LINC01001-203ENST00000607448 ARMCX2Q7L311 632 aa12.11□□□□□ -0.47
LINC01001-203ENST00000607448 DHX32Q7L7V1 743 aaKnown RBP12.11□□□□□ -0.47
LINC01001-203ENST00000607448 STAG2Q8N3U4 1231 aa12.11□□□□□ -0.47
LINC01001-203ENST00000607448 KATNBL1Q9H079 304 aa12.11□□□□□ -0.47
LINC01001-203ENST00000607448 CNNM2Q9H8M5 875 aa12.11□□□□□ -0.47
LINC01001-203ENST00000607448 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
LINC01001-203ENST00000607448 CYP39A1Q9NYL5 469 aa12.11□□□□□ -0.47
LINC01001-203ENST00000607448 ZHX1Q9UKY1 873 aaPredicted RBP12.11□□□□□ -0.47
LINC01001-203ENST00000607448 ZMYND8Q9ULU4 1186 aaPredicted RBP12.11□□□□□ -0.47
LINC01001-203ENST00000607448 GOLGA6L4A6NEF3 574 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms