RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 BAIAP3O94812 1187 aa7.44□□□□□ -1.22
CUX1-220ENST00000607092 ACRP10323 421 aa7.44□□□□□ -1.22
CUX1-220ENST00000607092 ALAS1P13196 640 aa7.44□□□□□ -1.22
CUX1-220ENST00000607092 PBX2P40425 430 aa7.44□□□□□ -1.22
CUX1-220ENST00000607092 BFSP2Q13515 415 aa7.44□□□□□ -1.22
CUX1-220ENST00000607092 DUSP28Q4G0W2 176 aa7.44□□□□□ -1.22
CUX1-220ENST00000607092 OTOP2Q7RTS6 562 aa7.44□□□□□ -1.22
CUX1-220ENST00000607092 MORC4Q8TE76 937 aa7.44□□□□□ -1.22
CUX1-220ENST00000607092 DCAF4Q8WV16 495 aa7.44□□□□□ -1.22
CUX1-220ENST00000607092 KATNBL1Q9H079 304 aa7.44□□□□□ -1.22
CUX1-220ENST00000607092 ALDH8A1Q9H2A2 487 aaPredicted RBP7.44□□□□□ -1.22
CUX1-220ENST00000607092 RYDENQ9NUL5 291 aaKnown RBP7.44□□□□□ -1.22
CUX1-220ENST00000607092 CYP39A1Q9NYL5 469 aa7.44□□□□□ -1.22
CUX1-220ENST00000607092 STX8Q9UNK0 236 aa7.44□□□□□ -1.22
CUX1-220ENST00000607092 NOD1Q9Y239 953 aa7.44□□□□□ -1.22
CUX1-220ENST00000607092 HCN4Q9Y3Q4 1203 aa7.44□□□□□ -1.22
CUX1-220ENST00000607092 EYSQ5T1H1 3165 aa7.44□□□□□ -1.22
CUX1-220ENST00000607092 MYH7P12883 1935 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 GREB1LQ9C091 1923 aaPredicted RBP7.43□□□□□ -1.22
CUX1-220ENST00000607092 GRXCR1A8MXD5 290 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 CTAGE5O15320 804 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 EFCAB14O75071 495 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 ICAM1P05362 532 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 SMPD1P17405 629 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 PLA2G5P39877 138 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 KCNJ6P48051 423 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 CCL23P55773 120 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 BEX3Q00994 111 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 TFAP4Q01664 338 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 CNTN2Q02246 1040 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 SKIV2LQ15477 1246 aaKnown RBP7.43□□□□□ -1.22
CUX1-220ENST00000607092 NFRKBQ6P4R8 1299 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 NSMFQ6X4W1 530 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 KIAA1211Q6ZU35 1233 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 SIRT2Q8IXJ6 389 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 LRRC47Q8N1G4 583 aaKnown RBP7.43□□□□□ -1.22
CUX1-220ENST00000607092 DNERQ8NFT8 737 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 SCFD2Q8WU76 684 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 OSBP2Q969R2 916 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 MTG1Q9BT17 334 aaPredicted RBP7.43□□□□□ -1.22
CUX1-220ENST00000607092 NKX2-4Q9H2Z4 354 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 LMCD1Q9NZU5 365 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 CCPG1Q9ULG6 757 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 TNKSO95271 1327 aa7.43□□□□□ -1.22
CUX1-220ENST00000607092 RBM47A0AV96 593 aaKnown RBP7.42□□□□□ -1.22
CUX1-220ENST00000607092 SOWAHBA6NEL2 793 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 ADCY6O43306 1168 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 B4GALT4O60513 344 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 PRDM1O75626 825 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 PCP11498 1178 aaKnown RBP7.42□□□□□ -1.22
CUX1-220ENST00000607092 MCCP23508 829 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 PPARAQ07869 468 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 ADGRE1Q14246 886 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 PPP2R5BQ15173 497 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 CCDC85BQ15834 202 aaPredicted RBP7.42□□□□□ -1.22
CUX1-220ENST00000607092 TAPT1Q6NXT6 567 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 CAGE1Q8TC20 777 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 FGD4Q96M96 766 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 AGBL1Q96MI9 1066 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 WDR11Q9BZH6 1224 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 FTOQ9C0B1 505 aaKnown RBP eCLIP7.42□□□□□ -1.22
CUX1-220ENST00000607092 TRPV6Q9H1D0 765 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 DCTPP1Q9H773 170 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 EPB41L4AQ9HCS5 686 aaPredicted RBP7.42□□□□□ -1.22
CUX1-220ENST00000607092 PRR12Q9ULL5 1215 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 WDR19Q8NEZ3 1342 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 CHD7Q9P2D1 2997 aa7.42□□□□□ -1.22
CUX1-220ENST00000607092 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.41□□□□□ -1.22
CUX1-220ENST00000607092 A6NJR5 290 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 SMIM22K7EJ46 135 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 ORC4O43929 436 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 TOP1P11387 765 aaKnown RBP7.41□□□□□ -1.22
CUX1-220ENST00000607092 BMP1P13497 986 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 ALDH5A1P51649 535 aaPredicted RBP7.41□□□□□ -1.22
CUX1-220ENST00000607092 PURAQ00577 322 aaKnown RBP7.41□□□□□ -1.22
CUX1-220ENST00000607092 PDE4DQ08499 809 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 TTLL4Q14679 1199 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 CCDC96Q2M329 555 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 SLFNL1Q499Z3 407 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 CCDC178Q5BJE1 867 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 FAM47CQ5HY64 1035 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 BTNL9Q6UXG8 535 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 FBXO16Q8IX29 292 aaPredicted RBP7.41□□□□□ -1.22
CUX1-220ENST00000607092 STK11IPQ8N1F8 1099 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 MICALL1Q8N3F8 863 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 RGS22Q8NE09 1264 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 OR6J1Q8NGC5 347 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 AFAP1L1Q8TED9 768 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 HLA-CQ95604 372 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 TTC14Q96N46 770 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 FSD1Q9BTV5 496 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 WNT8AQ9H1J5 351 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 RANBP17Q9H2T7 1088 aaKnown RBP7.41□□□□□ -1.22
CUX1-220ENST00000607092 ANAPC4Q9UJX5 808 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 YBX2Q9Y2T7 364 aaKnown RBP7.41□□□□□ -1.22
CUX1-220ENST00000607092 ASTN1O14525 1302 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 ZNF536O15090 1300 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 PRRC2BQ5JSZ5 2229 aaKnown RBP7.41□□□□□ -1.22
CUX1-220ENST00000607092 BRWD1Q9NSI6 2320 aa7.41□□□□□ -1.22
CUX1-220ENST00000607092 MYH4Q9Y623 1939 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms