RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 RIC8AQ9NPQ8 531 aa8.83□□□□□ -1
MSH6-211ENST00000606499 TMEM260Q9NX78 707 aa8.83□□□□□ -1
MSH6-211ENST00000606499 CYP39A1Q9NYL5 469 aa8.83□□□□□ -1
MSH6-211ENST00000606499 FBXO40Q9UH90 709 aa8.83□□□□□ -1
MSH6-211ENST00000606499 KIF3AQ9Y496 699 aa8.83□□□□□ -1
MSH6-211ENST00000606499 MYH7BA7E2Y1 1941 aa8.82□□□□□ -1
MSH6-211ENST00000606499 VPS37CA5D8V6 355 aaPredicted RBP8.82□□□□□ -1
MSH6-211ENST00000606499 MEIS2O14770 477 aa8.82□□□□□ -1
MSH6-211ENST00000606499 TNPO2O14787 897 aaKnown RBP8.82□□□□□ -1
MSH6-211ENST00000606499 FOXN1O15353 648 aa8.82□□□□□ -1
MSH6-211ENST00000606499 PGK2P07205 417 aa8.82□□□□□ -1
MSH6-211ENST00000606499 FCER1AP12319 257 aa8.82□□□□□ -1
MSH6-211ENST00000606499 XBP1P17861 261 aa8.82□□□□□ -1
MSH6-211ENST00000606499 SYT1P21579 422 aa8.82□□□□□ -1
MSH6-211ENST00000606499 CALML3P27482 149 aa8.82□□□□□ -1
MSH6-211ENST00000606499 ADORA2AP29274 412 aa8.82□□□□□ -1
MSH6-211ENST00000606499 PSMC4P43686 418 aa8.82□□□□□ -1
MSH6-211ENST00000606499 RPS6P62753 249 aaKnown RBP8.82□□□□□ -1
MSH6-211ENST00000606499 CNTN2Q02246 1040 aa8.82□□□□□ -1
MSH6-211ENST00000606499 GHRHRQ02643 423 aa8.82□□□□□ -1
MSH6-211ENST00000606499 BAATQ14032 418 aaPredicted RBP8.82□□□□□ -1
MSH6-211ENST00000606499 KCTD2Q14681 263 aa8.82□□□□□ -1
MSH6-211ENST00000606499 NOM1Q5C9Z4 860 aaKnown RBP8.82□□□□□ -1
MSH6-211ENST00000606499 LARP1BQ659C4 914 aaKnown RBP8.82□□□□□ -1
MSH6-211ENST00000606499 RNF207Q6ZRF8 634 aa8.82□□□□□ -1
MSH6-211ENST00000606499 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.82□□□□□ -12e-7■■■■□ 25.1
MSH6-211ENST00000606499 PLEKHH3Q7Z736 793 aa8.82□□□□□ -1
MSH6-211ENST00000606499 DIS3L2Q8IYB7 885 aaKnown RBP8.82□□□□□ -1
MSH6-211ENST00000606499 REXO1Q8N1G1 1221 aaKnown RBP8.82□□□□□ -1
MSH6-211ENST00000606499 FBXO18Q8NFZ0 1043 aa8.82□□□□□ -1
MSH6-211ENST00000606499 RASGRP4Q8TDF6 673 aa8.82□□□□□ -1
MSH6-211ENST00000606499 PGBD1Q96JS3 809 aa8.82□□□□□ -1
MSH6-211ENST00000606499 MMP19Q99542 508 aa8.82□□□□□ -1
MSH6-211ENST00000606499 C6orf50Q9HD87 102 aa8.82□□□□□ -1
MSH6-211ENST00000606499 COL20A1Q9P218 1284 aa8.82□□□□□ -1
MSH6-211ENST00000606499 BIN2Q9UBW5 565 aaPredicted RBP8.82□□□□□ -1
MSH6-211ENST00000606499 DAXXQ9UER7 740 aaPredicted RBP8.82□□□□□ -1
MSH6-211ENST00000606499 PCDHA4Q9UN74 947 aa8.82□□□□□ -1
MSH6-211ENST00000606499 IVNS1ABPQ9Y6Y0 642 aa8.82□□□□□ -1
MSH6-211ENST00000606499 ASTN1O14525 1302 aa8.81□□□□□ -1
MSH6-211ENST00000606499 PFASO15067 1338 aa8.81□□□□□ -1
MSH6-211ENST00000606499 FAM205CA6NFA0 338 aa8.81□□□□□ -1
MSH6-211ENST00000606499 KIF28PB7ZC32 967 aa8.81□□□□□ -1
MSH6-211ENST00000606499 H3BQV1 296 aa8.81□□□□□ -1
MSH6-211ENST00000606499 GCOM1H8Y6P7 765 aaPredicted RBP8.81□□□□□ -1
MSH6-211ENST00000606499 M0R2N6 131 aa8.81□□□□□ -1
MSH6-211ENST00000606499 PIK3CDO00329 1044 aa8.81□□□□□ -1
MSH6-211ENST00000606499 FKTNO75072 461 aa8.81□□□□□ -1
MSH6-211ENST00000606499 POLR2MP0CAP2 368 aa8.81□□□□□ -1
MSH6-211ENST00000606499 HSPA1AP0DMV8 641 aaKnown RBP8.81□□□□□ -1
MSH6-211ENST00000606499 HSPA1BP0DMV9 641 aaKnown RBP8.81□□□□□ -1
MSH6-211ENST00000606499 PDCP20941 246 aa8.81□□□□□ -1
MSH6-211ENST00000606499 PTPREP23469 700 aa8.81□□□□□ -1
MSH6-211ENST00000606499 KRT2P35908 639 aa8.81□□□□□ -1
MSH6-211ENST00000606499 CLK2P49760 499 aaKnown RBP8.81□□□□□ -1
MSH6-211ENST00000606499 MRPL12P52815 198 aaKnown RBP8.81□□□□□ -1
MSH6-211ENST00000606499 FCGRTP55899 365 aa8.81□□□□□ -1
MSH6-211ENST00000606499 NR5A1Q13285 461 aa8.81□□□□□ -1
MSH6-211ENST00000606499 PKP1Q13835 747 aa8.81□□□□□ -1
MSH6-211ENST00000606499 GRB14Q14449 540 aa8.81□□□□□ -1
MSH6-211ENST00000606499 IFFO2Q5TF58 517 aa8.81□□□□□ -1
MSH6-211ENST00000606499 JAKMIP3Q5VZ66 844 aa8.81□□□□□ -1
MSH6-211ENST00000606499 FCHSD1Q86WN1 690 aa8.81□□□□□ -1
MSH6-211ENST00000606499 MCF2L2Q86YR7 1114 aa8.81□□□□□ -1
MSH6-211ENST00000606499 BLIDQ8IZY5 108 aa8.81□□□□□ -1
MSH6-211ENST00000606499 FAM177A1Q8N128 213 aaPredicted RBP8.81□□□□□ -1
MSH6-211ENST00000606499 DAGLBQ8NCG7 672 aa8.81□□□□□ -1
MSH6-211ENST00000606499 RGS22Q8NE09 1264 aa8.81□□□□□ -1
MSH6-211ENST00000606499 SYTL5Q8TDW5 730 aaPredicted RBP8.81□□□□□ -1
MSH6-211ENST00000606499 IPO9Q96P70 1041 aaKnown RBP8.81□□□□□ -1
MSH6-211ENST00000606499 DDX49Q9Y6V7 483 aaKnown RBP8.81□□□□□ -1
MSH6-211ENST00000606499 MCM3APO60318 1980 aa8.81□□□□□ -1
MSH6-211ENST00000606499 DOCK3Q8IZD9 2030 aa8.8□□□□□ -1
MSH6-211ENST00000606499 DNAJC25-GNG10A0A024R161 153 aa8.8□□□□□ -1
MSH6-211ENST00000606499 SOWAHBA6NEL2 793 aa8.8□□□□□ -1
MSH6-211ENST00000606499 SLC15A5A6NIM6 579 aa8.8□□□□□ -1
MSH6-211ENST00000606499 BTBD18B2RXH4 712 aa8.8□□□□□ -1
MSH6-211ENST00000606499 POTEB2H3BUK9 544 aa8.8□□□□□ -1
MSH6-211ENST00000606499 STX6O43752 255 aa8.8□□□□□ -1
MSH6-211ENST00000606499 STRNO43815 780 aa8.8□□□□□ -1
MSH6-211ENST00000606499 COBLO75128 1261 aa8.8□□□□□ -1
MSH6-211ENST00000606499 HSPA8P11142 646 aaKnown RBP8.8□□□□□ -1
MSH6-211ENST00000606499 EIF2AK2P19525 551 aaKnown RBP8.8□□□□□ -1
MSH6-211ENST00000606499 GNA11P29992 359 aa8.8□□□□□ -1
MSH6-211ENST00000606499 DDIT3P35638 169 aa8.8□□□□□ -1
MSH6-211ENST00000606499 UBXN2AP68543 259 aa8.8□□□□□ -1
MSH6-211ENST00000606499 PRKCZQ05513 592 aa8.8□□□□□ -1
MSH6-211ENST00000606499 KIF22Q14807 665 aa8.8□□□□□ -1
MSH6-211ENST00000606499 EARS2Q5JPH6 523 aaKnown RBP8.8□□□□□ -1
MSH6-211ENST00000606499 MORN1Q5T089 497 aa8.8□□□□□ -1
MSH6-211ENST00000606499 FOXD4L5Q5VV16 416 aaPredicted RBP8.8□□□□□ -1
MSH6-211ENST00000606499 MCTP1Q6DN14 999 aa8.8□□□□□ -1
MSH6-211ENST00000606499 FERMT3Q86UX7 667 aa8.8□□□□□ -1
MSH6-211ENST00000606499 ABRAQ8N0Z2 381 aa8.8□□□□□ -1
MSH6-211ENST00000606499 FAM133AQ8N9E0 248 aa8.8□□□□□ -1
MSH6-211ENST00000606499 IL31RAQ8NI17 732 aa8.8□□□□□ -1
MSH6-211ENST00000606499 BICD2Q8TD16 824 aa8.8□□□□□ -1
MSH6-211ENST00000606499 FOXD4L4Q8WXT5 416 aaPredicted RBP8.8□□□□□ -1
MSH6-211ENST00000606499 TNFRSF25Q93038 417 aa8.8□□□□□ -1
MSH6-211ENST00000606499 ERO1AQ96HE7 468 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms