RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 KCNA10Q16322 511 aa14.33□□□□□ -0.12
CTSA-210ENST00000606000 CCSAPQ6IQ19 270 aaPredicted RBP14.33□□□□□ -0.12
CTSA-210ENST00000606000 HOMER1Q86YM7 354 aa14.33□□□□□ -0.12
CTSA-210ENST00000606000 RAB11FIP4Q86YS3 637 aa14.33□□□□□ -0.12
CTSA-210ENST00000606000 MORC4Q8TE76 937 aa14.33□□□□□ -0.12
CTSA-210ENST00000606000 LRRC2Q9BYS8 371 aa14.33□□□□□ -0.12
CTSA-210ENST00000606000 UPF3AQ9H1J1 476 aaKnown RBP14.33□□□□□ -0.12
CTSA-210ENST00000606000 LY9Q9HBG7 655 aa14.33□□□□□ -0.12
CTSA-210ENST00000606000 ABCB11O95342 1321 aa14.33□□□□□ -0.12
CTSA-210ENST00000606000 OPLAHO14841 1288 aa14.32□□□□□ -0.12
CTSA-210ENST00000606000 CYTH3O43739 400 aa14.32□□□□□ -0.12
CTSA-210ENST00000606000 CENPBP07199 599 aaPredicted RBP14.32□□□□□ -0.12
CTSA-210ENST00000606000 RXRAP19793 462 aa14.32□□□□□ -0.12
CTSA-210ENST00000606000 GJA9P57773 515 aa14.32□□□□□ -0.12
CTSA-210ENST00000606000 NOL8Q76FK4 1167 aaKnown RBP14.32□□□□□ -0.12
CTSA-210ENST00000606000 SH3RF1Q7Z6J0 888 aa14.32□□□□□ -0.12
CTSA-210ENST00000606000 TLK2Q86UE8 772 aa14.32□□□□□ -0.12
CTSA-210ENST00000606000 FBXO11Q86XK2 927 aa14.32□□□□□ -0.12
CTSA-210ENST00000606000 NUP133Q8WUM0 1156 aa14.32□□□□□ -0.12
CTSA-210ENST00000606000 MTMR8Q96EF0 704 aa14.32□□□□□ -0.12
CTSA-210ENST00000606000 PIGSQ96S52 555 aa14.32□□□□□ -0.12
CTSA-210ENST00000606000 GNEQ9Y223 722 aaKnown RBP14.32□□□□□ -0.12
CTSA-210ENST00000606000 SH2B2O14492 632 aaPredicted RBP14.31□□□□□ -0.12
CTSA-210ENST00000606000 NEFLP07196 543 aa14.31□□□□□ -0.12
CTSA-210ENST00000606000 ASGR1P07306 291 aa14.31□□□□□ -0.12
CTSA-210ENST00000606000 CST5P28325 142 aaPredicted RBP14.31□□□□□ -0.12
CTSA-210ENST00000606000 SART3Q15020 963 aaKnown RBP14.31□□□□□ -0.12
CTSA-210ENST00000606000 ZNF654Q8IZM8 581 aa14.31□□□□□ -0.12
CTSA-210ENST00000606000 SYTL5Q8TDW5 730 aaPredicted RBP14.31□□□□□ -0.12
CTSA-210ENST00000606000 PIBF1Q8WXW3 757 aa14.31□□□□□ -0.12
CTSA-210ENST00000606000 TCEANC2Q96MN5 208 aa14.31□□□□□ -0.12
CTSA-210ENST00000606000 TAAR1Q96RJ0 339 aa14.31□□□□□ -0.12
CTSA-210ENST00000606000 VTA1Q9NP79 307 aa14.31□□□□□ -0.12
CTSA-210ENST00000606000 PRDM5Q9NQX1 630 aaPredicted RBP14.31□□□□□ -0.12
CTSA-210ENST00000606000 STARD7Q9NQZ5 370 aa14.31□□□□□ -0.12
CTSA-210ENST00000606000 ADD3Q9UEY8 706 aaKnown RBP14.31□□□□□ -0.12
CTSA-210ENST00000606000 PNMA2Q9UL42 364 aa14.31□□□□□ -0.12
CTSA-210ENST00000606000 SOX1O00570 391 aaPredicted RBP14.3□□□□□ -0.12
CTSA-210ENST00000606000 ZBTB5O15062 677 aa14.3□□□□□ -0.12
CTSA-210ENST00000606000 PQBP1O60828 265 aaKnown RBP14.3□□□□□ -0.12
CTSA-210ENST00000606000 EDNRBP24530 442 aa14.3□□□□□ -0.12
CTSA-210ENST00000606000 TLE2Q04725 743 aa14.3□□□□□ -0.12
CTSA-210ENST00000606000 ADCK5Q3MIX3 580 aa14.3□□□□□ -0.12
CTSA-210ENST00000606000 GNASQ5JWF2 1037 aa14.3□□□□□ -0.12
CTSA-210ENST00000606000 CASC1Q6TDU7 716 aa14.3□□□□□ -0.12
CTSA-210ENST00000606000 CATIPQ7Z7H3 387 aa14.3□□□□□ -0.12
CTSA-210ENST00000606000 RASEFQ8IZ41 740 aa14.3□□□□□ -0.12
CTSA-210ENST00000606000 TSEN34Q9BSV6 310 aaKnown RBP14.3□□□□□ -0.12
CTSA-210ENST00000606000 AMNQ9BXJ7 453 aa14.3□□□□□ -0.12
CTSA-210ENST00000606000 RIOX1Q9H6W3 641 aa14.3□□□□□ -0.12
CTSA-210ENST00000606000 PDLIM7Q9NR12 457 aa14.3□□□□□ -0.12
CTSA-210ENST00000606000 TRIM43BA6NCK2 446 aa14.29□□□□□ -0.12
CTSA-210ENST00000606000 MOXD2PA6NHM9 499 aa14.29□□□□□ -0.12
CTSA-210ENST00000606000 DYNC1LI2O43237 492 aaPredicted RBP14.29□□□□□ -0.12
CTSA-210ENST00000606000 PLEKHA8P1O95397 391 aa14.29□□□□□ -0.12
CTSA-210ENST00000606000 CFBP00751 764 aa14.29□□□□□ -0.12
CTSA-210ENST00000606000 MCM5P33992 734 aa14.29□□□□□ -0.12
CTSA-210ENST00000606000 PDE4DQ08499 809 aa14.29□□□□□ -0.12
CTSA-210ENST00000606000 CMTR1Q8N1G2 835 aaKnown RBP14.29□□□□□ -0.12
CTSA-210ENST00000606000 COPS5Q92905 334 aa14.29□□□□□ -0.12
CTSA-210ENST00000606000 TRIM43Q96BQ3 446 aaPredicted RBP14.29□□□□□ -0.12
CTSA-210ENST00000606000 MRPL11Q9Y3B7 192 aaKnown RBP14.29□□□□□ -0.12
CTSA-210ENST00000606000 DDAH1O94760 285 aa14.28□□□□□ -0.12
CTSA-210ENST00000606000 ARIH2O95376 493 aa14.28□□□□□ -0.12
CTSA-210ENST00000606000 EIF2AK2P19525 551 aaKnown RBP14.28□□□□□ -0.12
CTSA-210ENST00000606000 ITGB8P26012 769 aa14.28□□□□□ -0.12
CTSA-210ENST00000606000 HOXA13P31271 388 aaPredicted RBP14.28□□□□□ -0.12
CTSA-210ENST00000606000 BMP8BP34820 402 aa14.28□□□□□ -0.12
CTSA-210ENST00000606000 NKX3-2P78367 333 aa14.28□□□□□ -0.12
CTSA-210ENST00000606000 KIAA1217Q5T5P2 1943 aa14.28□□□□□ -0.12
CTSA-210ENST00000606000 C1orf53Q5VUE5 145 aa14.28□□□□□ -0.12
CTSA-210ENST00000606000 IQSEC1Q6DN90 963 aa14.28□□□□□ -0.12
CTSA-210ENST00000606000 CXCL17Q6UXB2 119 aa14.28□□□□□ -0.12
CTSA-210ENST00000606000 NFXL1Q6ZNB6 911 aa14.28□□□□□ -0.12
CTSA-210ENST00000606000 RGS22Q8NE09 1264 aa14.28□□□□□ -0.12
CTSA-210ENST00000606000 DNERQ8NFT8 737 aa14.28□□□□□ -0.12
CTSA-210ENST00000606000 TMEM87BQ96K49 555 aa14.28□□□□□ -0.12
CTSA-210ENST00000606000 WDR11Q9BZH6 1224 aa14.28□□□□□ -0.12
CTSA-210ENST00000606000 UBE2OQ9C0C9 1292 aaKnown RBP14.28□□□□□ -0.12
CTSA-210ENST00000606000 SPC25Q9HBM1 224 aa14.28□□□□□ -0.12
CTSA-210ENST00000606000 PCDHA1Q9Y5I3 950 aa14.28□□□□□ -0.12
CTSA-210ENST00000606000 RBM47A0AV96 593 aaKnown RBP14.27□□□□□ -0.13
CTSA-210ENST00000606000 CCDC69A6NI79 296 aa14.27□□□□□ -0.13
CTSA-210ENST00000606000 HSD17B4P51659 736 aa14.27□□□□□ -0.13
CTSA-210ENST00000606000 FSCN1Q16658 493 aaKnown RBP14.27□□□□□ -0.13
CTSA-210ENST00000606000 DUSP28Q4G0W2 176 aa14.27□□□□□ -0.13
CTSA-210ENST00000606000 PCSK9Q8NBP7 692 aaKnown RBP14.27□□□□□ -0.13
CTSA-210ENST00000606000 LRCH3Q96II8 777 aa14.27□□□□□ -0.13
CTSA-210ENST00000606000 GLT1D1Q96MS3 346 aa14.27□□□□□ -0.13
CTSA-210ENST00000606000 NEK1Q96PY6 1258 aa14.27□□□□□ -0.13
CTSA-210ENST00000606000 AP5M1Q9H0R1 490 aa14.27□□□□□ -0.13
CTSA-210ENST00000606000 PRKAG2Q9UGJ0 569 aa14.27□□□□□ -0.13
CTSA-210ENST00000606000 BAZ2BQ9UIF8 2168 aaKnown RBP14.27□□□□□ -0.13
CTSA-210ENST00000606000 LOC102724159A0A0B4J2E5 919 aa14.26□□□□□ -0.13
CTSA-210ENST00000606000 CLTBP09497 229 aa14.26□□□□□ -0.13
CTSA-210ENST00000606000 CPA1P15085 419 aa14.26□□□□□ -0.13
CTSA-210ENST00000606000 PSMC6P62333 389 aa14.26□□□□□ -0.13
CTSA-210ENST00000606000 FAAP100Q0VG06 881 aa14.26□□□□□ -0.13
CTSA-210ENST00000606000 PWP2Q15269 919 aaKnown RBP14.26□□□□□ -0.13
CTSA-210ENST00000606000 RNF20Q5VTR2 975 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms