RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 ZYXQ15942 572 aaKnown RBP13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 STX1AQ16623 288 aa13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 TKFCQ3LXA3 575 aa13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ERO1BQ86YB8 467 aa13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 PROCA1Q8NCQ7 364 aaPredicted RBP13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 KIFC2Q96AC6 838 aa13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 MTMR9Q96QG7 549 aa13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CUEDC2Q9H467 287 aa13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 RPAP3Q9H6T3 665 aaPredicted RBP13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 KIAA1468Q9P260 1216 aa13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 STK24Q9Y6E0 443 aa13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ZHX2Q9Y6X8 837 aa13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ZNF536O15090 1300 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 VWA3AA6NCI4 1184 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 SPDYE5A6NIY4 337 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 POTECB2RU33 542 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ADM5C9JUS6 153 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 GCOM1H8Y6P7 765 aaPredicted RBP13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CXCL11O14625 94 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ZBED4O75132 1171 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 MYL1P05976 194 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 SLFN14P0C7P3 912 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 POLR2MP0CAP2 368 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 HSD17B4P51659 736 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 UBE2SQ16763 222 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 TMEM266Q2M3C6 531 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 Q4G0T1 1027 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ARMC9Q7Z3E5 817 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 LDHDQ86WU2 507 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 IGSF22Q8N9C0 903 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 TRIML1Q8N9V2 468 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 IQUBQ8NA54 791 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 SYMPKQ92797 1274 aaKnown RBP13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 TANGO6Q9C0B7 1094 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ANO10Q9NW15 660 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 TMEM260Q9NX78 707 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 TUBE1Q9UJT0 475 aa13.92□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 FRMPD4Q14CM0 1322 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 USP17L15C9J2P7 530 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 USP17L13C9JLJ4 530 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 USP17L11C9JVI0 530 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 USP17L18D6R9N7 530 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 USP17L22D6RA61 530 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 USP17L17D6RBQ6 530 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 USP17L19D6RCP7 530 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 USP17L20D6RJB6 530 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ACTN4O43707 911 aaKnown RBP13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 FLOT1O75955 427 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 DSG3P32926 999 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ARHGAP4P98171 946 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 GRIN1Q05586 938 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 USP17L24Q0WX57 530 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 PPIL2Q13356 520 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CAMK4Q16566 473 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CALCRLQ16602 461 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 USH1GQ495M9 461 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 NT5DC1Q5TFE4 455 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 PRAMEF18Q5VWM3 479 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CATSPERGQ6ZRH7 1159 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CCDC84Q86UT8 332 aaPredicted RBP13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 SLFN12Q8IYM2 578 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 KCTD17Q8N5Z5 321 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CNNM3Q8NE01 707 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 FAM200AQ8TCP9 573 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 TMEM60Q9H2L4 133 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 HOXC10Q9NYD6 342 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CCPG1Q9ULG6 757 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 KCNH4Q9UQ05 1017 aa13.91□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 LCTP09848 1927 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 VWA5AO00534 786 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 POLR2DO15514 142 aaKnown RBP13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 EDIL3O43854 480 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 XRCC6P12956 609 aaKnown RBP eCLIP13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 HOXA7P31268 230 aaPredicted RBP13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 HMGCS2P54868 508 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 COG2Q14746 738 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ZRSR1Q15695 479 aaKnown RBP13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 IL17AQ16552 155 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CT47A1Q5JQC4 288 aaPredicted RBP13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 USP17L6PQ6QN14 398 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 LBX2Q6XYB7 198 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 SH3RF1Q7Z6J0 888 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CEP57L1Q8IYX8 460 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 MB21D1Q8N884 522 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 REPS2Q8NFH8 660 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 SPATA20Q8TB22 786 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ANP32BQ92688 251 aaKnown RBP13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 FAM20AQ96MK3 541 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 BPIFA3Q9BQP9 254 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 NAT10Q9H0A0 1025 aaKnown RBP13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 RBSNQ9H1K0 784 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 KCNMB3Q9NPA1 279 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 FBXO28Q9NVF7 368 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CCDC39Q9UFE4 941 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 DDX25Q9UHL0 483 aaKnown RBP13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 MRVI1Q9Y6F6 885 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 WDR81Q562E7 1941 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 KIAA1217Q5T5P2 1943 aa13.9□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 A0A0G2JLL6 359 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms