RNA–Protein interactions for RNA: ENST00000601613.1

SAMD4B-211, Transcript of sterile alpha motif domain containing 4B, humanhuman

Gene SAMD4B, Length 2,690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-211ENST00000601613 COL1A1P02452 1464 aaPredicted RBP9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 UTRNP46939 3433 aa9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 FAM170AA1A519 330 aa9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 MACROD2A1Z1Q3 448 aa9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 PPP1R12AO14974 1030 aaPredicted RBP9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 NEBLO76041 1014 aa9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 RPN1P04843 607 aaKnown RBP9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 PLEKP08567 350 aaPredicted RBP9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 USP17L8P0C7I0 530 aa9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 MYBL2P10244 700 aa9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 SEMA3FQ13275 785 aa9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 KANK3Q6NY19 840 aa9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 TMTC3Q6ZXV5 915 aa9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 PRPF38AQ8NAV1 312 aaKnown RBP9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 CNKSR1Q969H4 720 aa9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 RNF41Q9H4P4 317 aaPredicted RBP9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 FAM169AQ9Y6X4 670 aa9.25□□□□□ -0.93
SAMD4B-211ENST00000601613 CTAGE15A4D2H0 777 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 USP17L3A6NCW0 530 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 USP17L4A6NCW7 530 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 PRPF3O43395 683 aaKnown RBP9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 PARP1P09874 1014 aaKnown RBP9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 CTAGE8P0CG41 777 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 ATP2C1P98194 919 aaPredicted RBP9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 INF2Q27J81 1249 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 SLC35G1Q2M3R5 365 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 GRIPAP1Q4V328 841 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 NAALADL2Q58DX5 795 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 USP17L1Q7RTZ2 530 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 CTAGE6Q86UF2 777 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 TXNRD3Q86VQ6 643 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 CNGA4Q8IV77 575 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 CTAGE4Q8IX94 777 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 CELF1Q92879 486 aaKnown RBP9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 MIEF2Q96C03 454 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 CALR3Q96L12 384 aaKnown RBP9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 EHD2Q9NZN4 543 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 MYO6Q9UM54 1294 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 EPN1Q9Y6I3 576 aaPredicted RBP9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 CNTNAP5Q8WYK1 1306 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 DDX60Q8IY21 1712 aaKnown RBP9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 FRMD3A2A2Y4 597 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 PDE2AO00408 941 aaPredicted RBP9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 RNF40O75150 1001 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 MYH7P12883 1935 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 XBP1P17861 261 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 ALDH1B1P30837 517 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 HOXA10P31260 410 aaPredicted RBP9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 STAT6P42226 847 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 MATR3P43243 847 aaKnown RBP eCLIP9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 DNA2P51530 1060 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 HERVK_113P62684 666 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 BRD3Q15059 726 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 SF3B3Q15393 1217 aaKnown RBP9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 WDR59Q6PJI9 974 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 GBP6Q6ZN66 633 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 IQCA1Q86XH1 822 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 TMTC2Q8N394 836 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 ANKRD13CQ8N6S4 541 aa9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 RBM17Q96I25 401 aaKnown RBP9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 GPR101Q96P66 508 aaPredicted RBP9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 TNRC6CQ9HCJ0 1690 aaKnown RBP9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 GNL3LQ9NVN8 582 aaKnown RBP9.24□□□□□ -0.93
SAMD4B-211ENST00000601613 MYO1BO43795 1136 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 NDUFA10O95299 355 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 GNAT2P19087 354 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 CXCR5P32302 372 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 CCDC152Q4G0S7 254 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 HSP90B2PQ58FF3 399 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 CCDC122Q5T0U0 273 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 HDAC7Q8WUI4 952 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 PCMTD1Q96MG8 357 aaPredicted RBP9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 ZNF219Q9P2Y4 722 aaPredicted RBP9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 SAMM50Q9Y512 469 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 TSPY2A6NKD2 308 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 SKAP2O75563 359 aaPredicted RBP9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 FCER1AP12319 257 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 SCG2P13521 617 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 AMPD2Q01433 879 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 MECOMQ03112 1051 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 CYP26C1Q6V0L0 522 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 CEP112Q8N8E3 955 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 GIMAP7Q8NHV1 300 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 CTCFLQ8NI51 663 aaPredicted RBP9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 FERMT2Q96AC1 680 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 FAM84BQ96KN1 310 aaPredicted RBP9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 CRAMP1Q96RY5 1269 aa9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 LIMA1Q9UHB6 759 aaKnown RBP9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 COL11A2P13942 1736 aaPredicted RBP9.23□□□□□ -0.93
SAMD4B-211ENST00000601613 MYH2Q9UKX2 1941 aa9.22□□□□□ -0.93
SAMD4B-211ENST00000601613 RASSF10A6NK89 507 aa9.22□□□□□ -0.93
SAMD4B-211ENST00000601613 GRIN3BO60391 1043 aa9.22□□□□□ -0.93
SAMD4B-211ENST00000601613 SYF2O95926 243 aaKnown RBP9.22□□□□□ -0.93
SAMD4B-211ENST00000601613 HEATR3Q7Z4Q2 680 aa9.22□□□□□ -0.93
SAMD4B-211ENST00000601613 TMTC1Q8IUR5 882 aa9.22□□□□□ -0.93
SAMD4B-211ENST00000601613 ELOA2Q8IYF1 753 aaPredicted RBP9.22□□□□□ -0.93
SAMD4B-211ENST00000601613 N4BP2L2Q92802 583 aaPredicted RBP9.22□□□□□ -0.93
SAMD4B-211ENST00000601613 TRIM47Q96LD4 638 aa9.22□□□□□ -0.93
SAMD4B-211ENST00000601613 VAT1LQ9HCJ6 419 aa9.22□□□□□ -0.93
SAMD4B-211ENST00000601613 MCM9Q9NXL9 1143 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8326.1 ms