RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 PNMA6FA0A0J9YX94 578 aa18.28■□□□□ 0.52
RPS28-203ENST00000600659 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.28■□□□□ 0.52
RPS28-203ENST00000600659 ASB14A6NK59 587 aa18.28■□□□□ 0.52
RPS28-203ENST00000600659 CALM1P0DP23 149 aa18.28■□□□□ 0.52
RPS28-203ENST00000600659 CALM2P0DP24 149 aa18.28■□□□□ 0.52
RPS28-203ENST00000600659 CALM3P0DP25 149 aa18.28■□□□□ 0.52
RPS28-203ENST00000600659 CALML3P27482 149 aa18.28■□□□□ 0.52
RPS28-203ENST00000600659 KIF5BP33176 963 aa18.28■□□□□ 0.52
RPS28-203ENST00000600659 HSD17B4P51659 736 aa18.28■□□□□ 0.52
RPS28-203ENST00000600659 FUT2Q10981 343 aa18.28■□□□□ 0.52
RPS28-203ENST00000600659 NECAB2Q7Z6G3 386 aa18.28■□□□□ 0.52
RPS28-203ENST00000600659 FANCBQ8NB91 859 aa18.28■□□□□ 0.52
RPS28-203ENST00000600659 SYTL5Q8TDW5 730 aaPredicted RBP18.28■□□□□ 0.52
RPS28-203ENST00000600659 MAF1Q9H063 256 aa18.28■□□□□ 0.52
RPS28-203ENST00000600659 MRPL11Q9Y3B7 192 aaKnown RBP18.28■□□□□ 0.52
RPS28-203ENST00000600659 NID2Q14112 1375 aa18.28■□□□□ 0.52
RPS28-203ENST00000600659 CNTNAP5Q8WYK1 1306 aa18.28■□□□□ 0.52
RPS28-203ENST00000600659 LOC102724159A0A0B4J2E5 919 aa18.27■□□□□ 0.52
RPS28-203ENST00000600659 DNM1LO00429 736 aa18.27■□□□□ 0.52
RPS28-203ENST00000600659 CASTP20810 708 aaKnown RBP18.27■□□□□ 0.52
RPS28-203ENST00000600659 PTGS1P23219 599 aa18.27■□□□□ 0.52
RPS28-203ENST00000600659 IRX5P78411 483 aaPredicted RBP18.27■□□□□ 0.52
RPS28-203ENST00000600659 PWP2Q15269 919 aaKnown RBP18.27■□□□□ 0.52
RPS28-203ENST00000600659 LRRC41Q15345 812 aa18.27■□□□□ 0.52
RPS28-203ENST00000600659 CCDC144BQ3MJ40 725 aa18.27■□□□□ 0.52
RPS28-203ENST00000600659 TMEM63BQ5T3F8 832 aa18.27■□□□□ 0.52
RPS28-203ENST00000600659 TAPT1Q6NXT6 567 aa18.27■□□□□ 0.52
RPS28-203ENST00000600659 BLOC1S2Q6QNY1 142 aa18.27■□□□□ 0.52
RPS28-203ENST00000600659 Q6ZUG5 572 aa18.27■□□□□ 0.52
RPS28-203ENST00000600659 FBXO16Q8IX29 292 aaPredicted RBP18.27■□□□□ 0.52
RPS28-203ENST00000600659 C11orf49Q9H6J7 331 aa18.27■□□□□ 0.52
RPS28-203ENST00000600659 ZSWIM6Q9HCJ5 1215 aa18.27■□□□□ 0.52
RPS28-203ENST00000600659 PCDHA1Q9Y5I3 950 aa18.27■□□□□ 0.52
RPS28-203ENST00000600659 SYNRGQ9UMZ2 1314 aa18.27■□□□□ 0.52
RPS28-203ENST00000600659 KLF18A0A0U1RQI7 1052 aa18.26■□□□□ 0.51
RPS28-203ENST00000600659 MYADML2A6NDP7 307 aa18.26■□□□□ 0.51
RPS28-203ENST00000600659 CTAGE5O15320 804 aa18.26■□□□□ 0.51
RPS28-203ENST00000600659 SEC24BO95487 1268 aa18.26■□□□□ 0.51
RPS28-203ENST00000600659 CDC27P30260 824 aa18.26■□□□□ 0.51
RPS28-203ENST00000600659 APOBRQ0VD83 1088 aa18.26■□□□□ 0.51
RPS28-203ENST00000600659 GJC2Q5T442 439 aaPredicted RBP18.26■□□□□ 0.51
RPS28-203ENST00000600659 DNERQ8NFT8 737 aa18.26■□□□□ 0.51
RPS28-203ENST00000600659 PIBF1Q8WXW3 757 aa18.26■□□□□ 0.51
RPS28-203ENST00000600659 TAAR1Q96RJ0 339 aa18.26■□□□□ 0.51
RPS28-203ENST00000600659 XPNPEP3Q9NQH7 507 aa18.26■□□□□ 0.51
RPS28-203ENST00000600659 PDGFCQ9NRA1 345 aa18.26■□□□□ 0.51
RPS28-203ENST00000600659 ADD3Q9UEY8 706 aaKnown RBP18.26■□□□□ 0.51
RPS28-203ENST00000600659 FAM184BQ9ULE4 1060 aa18.26■□□□□ 0.51
RPS28-203ENST00000600659 ZBTB43O43298 467 aa18.25■□□□□ 0.51
RPS28-203ENST00000600659 PGK1P00558 417 aa18.25■□□□□ 0.51
RPS28-203ENST00000600659 RARBP10826 455 aa18.25■□□□□ 0.51
RPS28-203ENST00000600659 ADCYAP1R1P41586 468 aa18.25■□□□□ 0.51
RPS28-203ENST00000600659 GNAQP50148 359 aa18.25■□□□□ 0.51
RPS28-203ENST00000600659 RCAN1P53805 252 aa18.25■□□□□ 0.51
RPS28-203ENST00000600659 TOB2Q14106 344 aaPredicted RBP18.25■□□□□ 0.51
RPS28-203ENST00000600659 CCSAPQ6IQ19 270 aaPredicted RBP18.25■□□□□ 0.51
RPS28-203ENST00000600659 EEPD1Q7L9B9 569 aa18.25■□□□□ 0.51
RPS28-203ENST00000600659 KLHDC9Q8NEP7 349 aa18.25■□□□□ 0.51
RPS28-203ENST00000600659 BRF1Q92994 677 aa18.25■□□□□ 0.51
RPS28-203ENST00000600659 IL17RAQ96F46 866 aa18.25■□□□□ 0.51
RPS28-203ENST00000600659 LZTS2Q9BRK4 669 aa18.25■□□□□ 0.51
RPS28-203ENST00000600659 TM6SF1Q9BZW5 370 aa18.25■□□□□ 0.51
RPS28-203ENST00000600659 UPF3AQ9H1J1 476 aaKnown RBP18.25■□□□□ 0.51
RPS28-203ENST00000600659 GNEQ9Y223 722 aaKnown RBP18.25■□□□□ 0.51
RPS28-203ENST00000600659 RBM47A0AV96 593 aaKnown RBP18.24■□□□□ 0.51
RPS28-203ENST00000600659 DUSP11O75319 330 aaKnown RBP18.24■□□□□ 0.51
RPS28-203ENST00000600659 EVCP57679 992 aa18.24■□□□□ 0.51
RPS28-203ENST00000600659 NKX3-2P78367 333 aa18.24■□□□□ 0.51
RPS28-203ENST00000600659 RUFY3Q7L099 469 aa18.24■□□□□ 0.51
RPS28-203ENST00000600659 MCF2L2Q86YR7 1114 aa18.24■□□□□ 0.51
RPS28-203ENST00000600659 VTA1Q9NP79 307 aa18.24■□□□□ 0.51
RPS28-203ENST00000600659 hCG_1642624A0A1W2PR95 340 aa18.23■□□□□ 0.51
RPS28-203ENST00000600659 CFBP00751 764 aa18.23■□□□□ 0.51
RPS28-203ENST00000600659 SMPD1P17405 629 aa18.23■□□□□ 0.51
RPS28-203ENST00000600659 PSMA5P28066 241 aa18.23■□□□□ 0.51
RPS28-203ENST00000600659 RTN1Q16799 776 aa18.23■□□□□ 0.51
RPS28-203ENST00000600659 C8orf34Q49A92 452 aa18.23■□□□□ 0.51
RPS28-203ENST00000600659 PRPF38BQ5VTL8 546 aaKnown RBP18.23■□□□□ 0.51
RPS28-203ENST00000600659 RRP36Q96EU6 259 aaKnown RBP18.23■□□□□ 0.51
RPS28-203ENST00000600659 HTATIP2Q9BUP3 242 aa18.23■□□□□ 0.51
RPS28-203ENST00000600659 UPF3BQ9BZI7 483 aaKnown RBP18.23■□□□□ 0.51
RPS28-203ENST00000600659 RBM28Q9NW13 759 aaKnown RBP18.23■□□□□ 0.51
RPS28-203ENST00000600659 GOLGA8AA7E2F4 631 aa18.23■□□□□ 0.51
RPS28-203ENST00000600659 GOLGA8BA8MQT2 603 aa18.23■□□□□ 0.51
RPS28-203ENST00000600659 CST5P28325 142 aaPredicted RBP18.23■□□□□ 0.51
RPS28-203ENST00000600659 HOXA13P31271 388 aaPredicted RBP18.23■□□□□ 0.51
RPS28-203ENST00000600659 GJA9P57773 515 aa18.23■□□□□ 0.51
RPS28-203ENST00000600659 LRRC26Q2I0M4 334 aa18.23■□□□□ 0.51
RPS28-203ENST00000600659 CCDC82Q8N4S0 544 aa18.23■□□□□ 0.51
RPS28-203ENST00000600659 ARRDC4Q8NCT1 418 aa18.23■□□□□ 0.51
RPS28-203ENST00000600659 PXMP2Q9NR77 195 aa18.23■□□□□ 0.51
RPS28-203ENST00000600659 PHF24Q9UPV7 400 aa18.23■□□□□ 0.51
RPS28-203ENST00000600659 FRMPD4Q14CM0 1322 aa18.22■□□□□ 0.51
RPS28-203ENST00000600659 RANBP2P49792 3224 aaKnown RBP18.22■□□□□ 0.51
RPS28-203ENST00000600659 ADD1P35611 737 aaKnown RBP18.22■□□□□ 0.51
RPS28-203ENST00000600659 SNX17Q15036 470 aa18.22■□□□□ 0.51
RPS28-203ENST00000600659 TYW1BQ6NUM6 668 aa18.22■□□□□ 0.51
RPS28-203ENST00000600659 SYNE3Q6ZMZ3 975 aa18.22■□□□□ 0.51
RPS28-203ENST00000600659 SAMD3Q8N6K7 520 aa18.22■□□□□ 0.51
RPS28-203ENST00000600659 IL31RAQ8NI17 732 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms