RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 PCSK9Q8NBP7 692 aaKnown RBP18.68■□□□□ 0.58
IRF3-210ENST00000595240 IGDCC4Q8TDY8 1250 aa18.68■□□□□ 0.58
IRF3-210ENST00000595240 MTMR8Q96EF0 704 aa18.68■□□□□ 0.58
IRF3-210ENST00000595240 VAT1LQ9HCJ6 419 aa18.68■□□□□ 0.58
IRF3-210ENST00000595240 LAMA3Q16787 3333 aa18.67■□□□□ 0.58
IRF3-210ENST00000595240 LRRC37A2A6NM11 1700 aa18.67■□□□□ 0.58
IRF3-210ENST00000595240 MDM2Q00987 491 aaPredicted RBP18.67■□□□□ 0.58
IRF3-210ENST00000595240 TROAPQ12815 778 aa18.67■□□□□ 0.58
IRF3-210ENST00000595240 NECTIN1Q15223 517 aa18.67■□□□□ 0.58
IRF3-210ENST00000595240 NOL8Q76FK4 1167 aaKnown RBP18.67■□□□□ 0.58
IRF3-210ENST00000595240 TLK2Q86UE8 772 aa18.67■□□□□ 0.58
IRF3-210ENST00000595240 FBXO11Q86XK2 927 aa18.67■□□□□ 0.58
IRF3-210ENST00000595240 DNERQ8NFT8 737 aa18.67■□□□□ 0.58
IRF3-210ENST00000595240 CCDC136Q96JN2 1154 aa18.67■□□□□ 0.58
IRF3-210ENST00000595240 UBE2OQ9C0C9 1292 aaKnown RBP18.67■□□□□ 0.58
IRF3-210ENST00000595240 ANO2Q9NQ90 1003 aa18.67■□□□□ 0.58
IRF3-210ENST00000595240 STARD7Q9NQZ5 370 aa18.67■□□□□ 0.58
IRF3-210ENST00000595240 PDLIM7Q9NR12 457 aa18.67■□□□□ 0.58
IRF3-210ENST00000595240 PRKAG2Q9UGJ0 569 aa18.67■□□□□ 0.58
IRF3-210ENST00000595240 SLC27A2O14975 620 aa18.66■□□□□ 0.58
IRF3-210ENST00000595240 ASGR1P07306 291 aa18.66■□□□□ 0.58
IRF3-210ENST00000595240 SLC35G1Q2M3R5 365 aa18.66■□□□□ 0.58
IRF3-210ENST00000595240 CREB3L3Q68CJ9 461 aa18.66■□□□□ 0.58
IRF3-210ENST00000595240 GLT1D1Q96MS3 346 aa18.66■□□□□ 0.58
IRF3-210ENST00000595240 LBHD1Q9BQE6 289 aaPredicted RBP18.66■□□□□ 0.58
IRF3-210ENST00000595240 MTA3Q9BTC8 594 aa18.66■□□□□ 0.58
IRF3-210ENST00000595240 MRPL11Q9Y3B7 192 aaKnown RBP18.66■□□□□ 0.58
IRF3-210ENST00000595240 Q9Y3F1 56 aa18.66■□□□□ 0.58
IRF3-210ENST00000595240 ELP1O95163 1332 aa18.66■□□□□ 0.58
IRF3-210ENST00000595240 RBM47A0AV96 593 aaKnown RBP18.65■□□□□ 0.58
IRF3-210ENST00000595240 TRIM43BA6NCK2 446 aa18.65■□□□□ 0.58
IRF3-210ENST00000595240 PPP1R11O60927 126 aaPredicted RBP18.65■□□□□ 0.58
IRF3-210ENST00000595240 PTGS1P23219 599 aa18.65■□□□□ 0.58
IRF3-210ENST00000595240 TMEM63BQ5T3F8 832 aa18.65■□□□□ 0.58
IRF3-210ENST00000595240 ANKRD33Q7Z3H0 272 aa18.65■□□□□ 0.58
IRF3-210ENST00000595240 CATIPQ7Z7H3 387 aa18.65■□□□□ 0.58
IRF3-210ENST00000595240 MCF2L2Q86YR7 1114 aa18.65■□□□□ 0.58
IRF3-210ENST00000595240 SYTL5Q8TDW5 730 aaPredicted RBP18.65■□□□□ 0.58
IRF3-210ENST00000595240 TBC1D5Q92609 795 aa18.65■□□□□ 0.58
IRF3-210ENST00000595240 TRIM43Q96BQ3 446 aaPredicted RBP18.65■□□□□ 0.58
IRF3-210ENST00000595240 MPHOSPH6Q99547 160 aaKnown RBP18.65■□□□□ 0.58
IRF3-210ENST00000595240 AMNQ9BXJ7 453 aa18.65■□□□□ 0.58
IRF3-210ENST00000595240 AP5M1Q9H0R1 490 aa18.65■□□□□ 0.58
IRF3-210ENST00000595240 LY9Q9HBG7 655 aa18.65■□□□□ 0.58
IRF3-210ENST00000595240 PRDM5Q9NQX1 630 aaPredicted RBP18.65■□□□□ 0.58
IRF3-210ENST00000595240 ZBTB5O15062 677 aa18.64■□□□□ 0.57
IRF3-210ENST00000595240 DYNC1LI2O43237 492 aaPredicted RBP18.64■□□□□ 0.57
IRF3-210ENST00000595240 PRC1O43663 620 aa18.64■□□□□ 0.57
IRF3-210ENST00000595240 PQBP1O60828 265 aaKnown RBP18.64■□□□□ 0.57
IRF3-210ENST00000595240 BEX3Q00994 111 aa18.64■□□□□ 0.57
IRF3-210ENST00000595240 PDE4DQ08499 809 aa18.64■□□□□ 0.57
IRF3-210ENST00000595240 COL9A3Q14050 684 aaPredicted RBP18.64■□□□□ 0.57
IRF3-210ENST00000595240 FSCN1Q16658 493 aaKnown RBP18.64■□□□□ 0.57
IRF3-210ENST00000595240 DUSP28Q4G0W2 176 aa18.64■□□□□ 0.57
IRF3-210ENST00000595240 SH3RF1Q7Z6J0 888 aa18.64■□□□□ 0.57
IRF3-210ENST00000595240 TDHQ8IZJ6 230 aa18.64■□□□□ 0.57
IRF3-210ENST00000595240 TOX2Q96NM4 488 aa18.64■□□□□ 0.57
IRF3-210ENST00000595240 RIOX1Q9H6W3 641 aa18.64■□□□□ 0.57
IRF3-210ENST00000595240 GPHNQ9NQX3 736 aaPredicted RBP18.64■□□□□ 0.57
IRF3-210ENST00000595240 COL20A1Q9P218 1284 aa18.64■□□□□ 0.57
IRF3-210ENST00000595240 B4DLN1 442 aa18.63■□□□□ 0.57
IRF3-210ENST00000595240 SOX1O00570 391 aaPredicted RBP18.63■□□□□ 0.57
IRF3-210ENST00000595240 OPLAHO14841 1288 aa18.63■□□□□ 0.57
IRF3-210ENST00000595240 CYTH3O43739 400 aa18.63■□□□□ 0.57
IRF3-210ENST00000595240 CDC45O75419 566 aa18.63■□□□□ 0.57
IRF3-210ENST00000595240 CLTBP09497 229 aa18.63■□□□□ 0.57
IRF3-210ENST00000595240 MCM5P33992 734 aa18.63■□□□□ 0.57
IRF3-210ENST00000595240 CDK7P50613 346 aa18.63■□□□□ 0.57
IRF3-210ENST00000595240 MRPL12P52815 198 aaKnown RBP18.63■□□□□ 0.57
IRF3-210ENST00000595240 GHRHRQ02643 423 aa18.63■□□□□ 0.57
IRF3-210ENST00000595240 MAP3K14Q99558 947 aa18.63■□□□□ 0.57
IRF3-210ENST00000595240 WDR11Q9BZH6 1224 aa18.63■□□□□ 0.57
IRF3-210ENST00000595240 SH2B2O14492 632 aaPredicted RBP18.62■□□□□ 0.57
IRF3-210ENST00000595240 KIAA0355O15063 1070 aa18.62■□□□□ 0.57
IRF3-210ENST00000595240 DDAH1O94760 285 aa18.62■□□□□ 0.57
IRF3-210ENST00000595240 FAAP100Q0VG06 881 aa18.62■□□□□ 0.57
IRF3-210ENST00000595240 LRIT3Q3SXY7 679 aa18.62■□□□□ 0.57
IRF3-210ENST00000595240 CASC1Q6TDU7 716 aa18.62■□□□□ 0.57
IRF3-210ENST00000595240 CXCL17Q6UXB2 119 aa18.62■□□□□ 0.57
IRF3-210ENST00000595240 ZNF654Q8IZM8 581 aa18.62■□□□□ 0.57
IRF3-210ENST00000595240 NSUN6Q8TEA1 469 aaKnown RBP18.62■□□□□ 0.57
IRF3-210ENST00000595240 TMEM87BQ96K49 555 aa18.62■□□□□ 0.57
IRF3-210ENST00000595240 TAAR1Q96RJ0 339 aa18.62■□□□□ 0.57
IRF3-210ENST00000595240 PCDHA1Q9Y5I3 950 aa18.62■□□□□ 0.57
IRF3-210ENST00000595240 SZT2Q5T011 3432 aa18.61■□□□□ 0.57
IRF3-210ENST00000595240 A0A0U1RQG5 324 aaPredicted RBP18.61■□□□□ 0.57
IRF3-210ENST00000595240 DCDC2CA8MYV0 355 aa18.61■□□□□ 0.57
IRF3-210ENST00000595240 CABYRO75952 493 aa18.61■□□□□ 0.57
IRF3-210ENST00000595240 HSD17B4P51659 736 aa18.61■□□□□ 0.57
IRF3-210ENST00000595240 HOMER1Q86YM7 354 aa18.61■□□□□ 0.57
IRF3-210ENST00000595240 TMTC2Q8N394 836 aa18.61■□□□□ 0.57
IRF3-210ENST00000595240 SCFD2Q8WU76 684 aa18.61■□□□□ 0.57
IRF3-210ENST00000595240 PIGSQ96S52 555 aa18.61■□□□□ 0.57
IRF3-210ENST00000595240 RMDN3Q96TC7 470 aa18.61■□□□□ 0.57
IRF3-210ENST00000595240 MROH7Q68CQ1 1323 aa18.6■□□□□ 0.57
IRF3-210ENST00000595240 PNMA6FA0A0J9YX94 578 aa18.6■□□□□ 0.57
IRF3-210ENST00000595240 ARVCFO00192 962 aa18.6■□□□□ 0.57
IRF3-210ENST00000595240 ZEB2O60315 1214 aa18.6■□□□□ 0.57
IRF3-210ENST00000595240 ITGB8P26012 769 aa18.6■□□□□ 0.57
IRF3-210ENST00000595240 LIFRP42702 1097 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms