RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 COASYQ13057 564 aa14.41□□□□□ -0.1
ZNF558-202ENST00000593891 COL9A3Q14050 684 aaPredicted RBP14.41□□□□□ -0.1
ZNF558-202ENST00000593891 ANGPT1Q15389 498 aa14.41□□□□□ -0.1
ZNF558-202ENST00000593891 ANKRD35Q8N283 1001 aa14.41□□□□□ -0.1
ZNF558-202ENST00000593891 CAGE1Q8TC20 777 aa14.41□□□□□ -0.1
ZNF558-202ENST00000593891 PPP2R3CQ969Q6 453 aa14.41□□□□□ -0.1
ZNF558-202ENST00000593891 USP15Q9Y4E8 981 aaPredicted RBP14.41□□□□□ -0.1
ZNF558-202ENST00000593891 CXCL10P02778 98 aa14.4□□□□□ -0.1
ZNF558-202ENST00000593891 SELPP16109 830 aa14.4□□□□□ -0.1
ZNF558-202ENST00000593891 GTF2F1P35269 517 aaKnown RBP eCLIP14.4□□□□□ -0.1
ZNF558-202ENST00000593891 IQSEC1Q6DN90 963 aa14.4□□□□□ -0.1
ZNF558-202ENST00000593891 SNRNP48Q6IEG0 339 aaKnown RBP14.4□□□□□ -0.1
ZNF558-202ENST00000593891 NFRKBQ6P4R8 1299 aa14.4□□□□□ -0.1
ZNF558-202ENST00000593891 YME1L1Q96TA2 773 aa14.4□□□□□ -0.1
ZNF558-202ENST00000593891 MTG1Q9BT17 334 aaPredicted RBP14.4□□□□□ -0.1
ZNF558-202ENST00000593891 ARHGEF10LQ9HCE6 1279 aa14.4□□□□□ -0.1
ZNF558-202ENST00000593891 IGSF5Q9NSI5 407 aa14.4□□□□□ -0.1
ZNF558-202ENST00000593891 VAMP4O75379 141 aa14.39□□□□□ -0.11
ZNF558-202ENST00000593891 MYL3P08590 195 aa14.39□□□□□ -0.11
ZNF558-202ENST00000593891 SHMT1P34896 483 aa14.39□□□□□ -0.11
ZNF558-202ENST00000593891 USP5P45974 858 aa14.39□□□□□ -0.11
ZNF558-202ENST00000593891 SLC4A3P48751 1232 aa14.39□□□□□ -0.11
ZNF558-202ENST00000593891 PTPN11Q06124 597 aaPredicted RBP14.39□□□□□ -0.11
ZNF558-202ENST00000593891 MTMR3Q13615 1198 aa14.39□□□□□ -0.11
ZNF558-202ENST00000593891 GPNMBQ14956 572 aa14.39□□□□□ -0.11
ZNF558-202ENST00000593891 LRRC8DQ7L1W4 858 aa14.39□□□□□ -0.11
ZNF558-202ENST00000593891 MYOCDQ8IZQ8 938 aa14.39□□□□□ -0.11
ZNF558-202ENST00000593891 KREMEN2Q8NCW0 462 aa14.39□□□□□ -0.11
ZNF558-202ENST00000593891 VCPKMTQ9H867 229 aa14.39□□□□□ -0.11
ZNF558-202ENST00000593891 FBXO28Q9NVF7 368 aa14.39□□□□□ -0.11
ZNF558-202ENST00000593891 PPP1R9AQ9ULJ8 1098 aa14.39□□□□□ -0.11
ZNF558-202ENST00000593891 TMX2Q9Y320 296 aa14.39□□□□□ -0.11
ZNF558-202ENST00000593891 CDK5RAP2Q96SN8 1893 aa14.39□□□□□ -0.11
ZNF558-202ENST00000593891 RB1P06400 928 aa14.38□□□□□ -0.11
ZNF558-202ENST00000593891 ATF7P17544 494 aaPredicted RBP14.38□□□□□ -0.11
ZNF558-202ENST00000593891 PURAQ00577 322 aaKnown RBP14.38□□□□□ -0.11
ZNF558-202ENST00000593891 RALBP1Q15311 655 aa14.38□□□□□ -0.11
ZNF558-202ENST00000593891 PI16Q6UXB8 463 aa14.38□□□□□ -0.11
ZNF558-202ENST00000593891 DCLK2Q8N568 766 aa14.38□□□□□ -0.11
ZNF558-202ENST00000593891 REPS2Q8NFH8 660 aa14.38□□□□□ -0.11
ZNF558-202ENST00000593891 XAGE2Q96GT9 111 aa14.38□□□□□ -0.11
ZNF558-202ENST00000593891 FGD4Q96M96 766 aa14.38□□□□□ -0.11
ZNF558-202ENST00000593891 C11orf84Q9BUA3 381 aaPredicted RBP14.38□□□□□ -0.11
ZNF558-202ENST00000593891 CLEC1BQ9P126 229 aa14.38□□□□□ -0.11
ZNF558-202ENST00000593891 COL11A1P12107 1806 aaPredicted RBP14.37□□□□□ -0.11
ZNF558-202ENST00000593891 ASB14A6NK59 587 aa14.37□□□□□ -0.11
ZNF558-202ENST00000593891 PTGS1P23219 599 aa14.37□□□□□ -0.11
ZNF558-202ENST00000593891 CPT1AP50416 773 aa14.37□□□□□ -0.11
ZNF558-202ENST00000593891 GORABQ5T7V8 394 aa14.37□□□□□ -0.11
ZNF558-202ENST00000593891 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.37□□□□□ -0.11
ZNF558-202ENST00000593891 PCGF6Q9BYE7 350 aa14.37□□□□□ -0.11
ZNF558-202ENST00000593891 FBXO40Q9UH90 709 aa14.37□□□□□ -0.11
ZNF558-202ENST00000593891 RIPK3Q9Y572 518 aa14.37□□□□□ -0.11
ZNF558-202ENST00000593891 NBNO60934 754 aa14.36□□□□□ -0.11
ZNF558-202ENST00000593891 CTNNB1P35222 781 aa14.36□□□□□ -0.11
ZNF558-202ENST00000593891 PTGISQ16647 500 aa14.36□□□□□ -0.11
ZNF558-202ENST00000593891 TCTN1Q2MV58 587 aa14.36□□□□□ -0.11
ZNF558-202ENST00000593891 BRDTQ58F21 947 aaPredicted RBP14.36□□□□□ -0.11
ZNF558-202ENST00000593891 TMEM179Q6ZVK1 233 aa14.36□□□□□ -0.11
ZNF558-202ENST00000593891 CCDC105Q8IYK2 499 aa14.36□□□□□ -0.11
ZNF558-202ENST00000593891 EFHBQ8N7U6 833 aa14.36□□□□□ -0.11
ZNF558-202ENST00000593891 RTKNQ9BST9 563 aa14.36□□□□□ -0.11
ZNF558-202ENST00000593891 CDV3Q9UKY7 258 aaKnown RBP14.36□□□□□ -0.11
ZNF558-202ENST00000593891 SORCS3Q9UPU3 1222 aa14.36□□□□□ -0.11
ZNF558-202ENST00000593891 AKAP2Q9Y2D5 859 aa14.36□□□□□ -0.11
ZNF558-202ENST00000593891 TET1Q8NFU7 2136 aa14.35□□□□□ -0.11
ZNF558-202ENST00000593891 DCDC2BA2VCK2 349 aa14.35□□□□□ -0.11
ZNF558-202ENST00000593891 PRR5-ARHGAP8B1AHC4 643 aa14.35□□□□□ -0.11
ZNF558-202ENST00000593891 GRM6O15303 877 aa14.35□□□□□ -0.11
ZNF558-202ENST00000593891 ARHGAP8P85298 464 aa14.35□□□□□ -0.11
ZNF558-202ENST00000593891 ZC3H14Q6PJT7 736 aaKnown RBP14.35□□□□□ -0.11
ZNF558-202ENST00000593891 ADGRA1Q86SQ6 560 aa14.35□□□□□ -0.11
ZNF558-202ENST00000593891 GPR161Q8N6U8 529 aaKnown RBP14.35□□□□□ -0.11
ZNF558-202ENST00000593891 FLCNQ8NFG4 579 aa14.35□□□□□ -0.11
ZNF558-202ENST00000593891 CTDP1Q9Y5B0 961 aaPredicted RBP14.35□□□□□ -0.11
ZNF558-202ENST00000593891 R4GN57 208 aa14.35□□□□□ -0.11
ZNF558-202ENST00000593891 PTPRSQ13332 1948 aa14.35□□□□□ -0.11
ZNF558-202ENST00000593891 UNC79Q9P2D8 2635 aa14.34□□□□□ -0.11
ZNF558-202ENST00000593891 USP17L12C9JPN9 530 aa14.34□□□□□ -0.11
ZNF558-202ENST00000593891 USP17L21D6R901 530 aa14.34□□□□□ -0.11
ZNF558-202ENST00000593891 C5orf67F2Z3F1 127 aa14.34□□□□□ -0.11
ZNF558-202ENST00000593891 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.34□□□□□ -0.11
ZNF558-202ENST00000593891 CERS3Q8IU89 383 aa14.34□□□□□ -0.11
ZNF558-202ENST00000593891 DTWD2Q8NBA8 298 aa14.34□□□□□ -0.11
ZNF558-202ENST00000593891 NEUROD6Q96NK8 337 aa14.34□□□□□ -0.11
ZNF558-202ENST00000593891 PDGFCQ9NRA1 345 aa14.34□□□□□ -0.11
ZNF558-202ENST00000593891 RWDD3Q9Y3V2 267 aa14.34□□□□□ -0.11
ZNF558-202ENST00000593891 ZFYVE26Q68DK2 2539 aa14.34□□□□□ -0.11
ZNF558-202ENST00000593891 MYO7AQ13402 2215 aa14.33□□□□□ -0.12
ZNF558-202ENST00000593891 KPNA6O60684 536 aa14.33□□□□□ -0.12
ZNF558-202ENST00000593891 CSPG5O95196 566 aa14.33□□□□□ -0.12
ZNF558-202ENST00000593891 BRD1O95696 1058 aa14.33□□□□□ -0.12
ZNF558-202ENST00000593891 DYNLL1P63167 89 aaKnown RBP14.33□□□□□ -0.12
ZNF558-202ENST00000593891 ICA1Q05084 483 aa14.33□□□□□ -0.12
ZNF558-202ENST00000593891 KIAA1211Q6ZU35 1233 aa14.33□□□□□ -0.12
ZNF558-202ENST00000593891 CPXCR1Q8N123 301 aa14.33□□□□□ -0.12
ZNF558-202ENST00000593891 CHST13Q8NET6 341 aa14.33□□□□□ -0.12
ZNF558-202ENST00000593891 PPP1R13LQ8WUF5 828 aa14.33□□□□□ -0.12
ZNF558-202ENST00000593891 ATP2A1O14983 1001 aa14.32□□□□□ -0.12
ZNF558-202ENST00000593891 RAD21O60216 631 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms